| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223542
Identifier: 78223542
GI number: 78223542
Start: 2646565
End: 2646804
Strand: Reverse
Name: 78223542
Synonym: Gmet_2339
Alternate gene names: NA
Gene position: 2646804-2646565 (Counterclockwise)
Preceding gene: 78223543
Following gene: 78223541
Centisome position: 66.21
GC content: 56.25
Gene sequence:
>240_bases ATGCCGACCCTGGACGCACTCACCCCGATCTTCCGCCAGGTTTTCGACGACGACAGCATCGTCCTGACCCGCGAGACTTC GGCCAATGACATCGATGCCTGGGATTCTCTTTCGCACATGAACCTCATTGTGTCCCTGGAGGTGCACTACAAGATCAAGT TTGCCCTGGGCGAGCTGCAGAAACTGAAGAATGTGGGCGATCTGGCCGACCTGGTCGACAAGAAACTTGCGAGGAAGTGA
Upstream 100 bases:
>100_bases GATTCCCAAGAACAAGAGCGGCAAGATCATGCGCCGCTACCTGAAGGCAACCTACCTGGGGCAGGACGCCGGGGACATCT CTACCATGGAGGAATGAACT
Downstream 100 bases:
>100_bases GAAGACGTAGATTTATGCTTTTCAACTCCTACGAATTCATCCTGGCGTTCCTGCCGGTAACCCTGCTCCTGTATTACCTG CTGAACGGAAAGCGCCTCGC
Product: putative acyl carrier protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK
Sequences:
>Translated_79_residues MPTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK >Mature_78_residues PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8941; Mature: 8810
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQ CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEHHHHHHH KLKNVGDLADLVDKKLARK HHHCCCHHHHHHHHHHCCC >Mature Secondary Structure PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQ CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEHHHHHHH KLKNVGDLADLVDKKLARK HHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA