| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is acsA [H]
Identifier: 78223543
GI number: 78223543
Start: 2646808
End: 2648427
Strand: Reverse
Name: acsA [H]
Synonym: Gmet_2340
Alternate gene names: 78223543
Gene position: 2648427-2646808 (Counterclockwise)
Preceding gene: 78223544
Following gene: 78223542
Centisome position: 66.25
GC content: 59.75
Gene sequence:
>1620_bases ATGCTGATAGAAAACGGCCAGTACAACATCGGGGATATCTGTACCTCCCGCCAATGCCGACTGGGGAGGGGAGATCGCGT TGCCATGCGGTGGCTCACGCCCGGCATGGAGCGTCGTGATTACACCTTCAACGAGCTTGACGGCCTTTCGGGCAGATTCG CCAATGTTCTCGCCTCCCTGGGGGTCGGGGCTGGCGAGGTGTTCTTCACGTACCTGCCGAAGCAGCCGGAACAGTTCGTT GCCTTTCTTGGCGCATTGAAACTTACCGCGGTTGCAGGCACCCTTTTCTCCAACTTCGGCGAAGAGGCTCTCCTGGACCG TCTCGCCGACGCCCGTGCGTGCGGCATCATCACCAAGAAGAGCCTTCTCCGGAAAATTATCCGAATCCGCCCGCAACTGC CGGATCTTCGCTTCATCATCCTGGTTGACAGCGACGATCACCAGGCCGACGGCATTTTCAGTTACAGCCGGCTCATGGCG GAGGCATCCCCCGCGTTCGTCACTCCCCTGACACCTGCGGATGCGCCGTCGGTTCTCCATTACACCTCTGGGTCCACGGG AAAGCCGAAGGGGGTGCTCCATCGCCACGGCGCGGTGACTATGATCAACTCGACTGCCCAGCTGGTCCTCGGGCTTCGTG AGGATGATGTGTACTGGTGCACCGCTGATCAGGGATGGGTAACCGGAACCTCCTACGGCATTATCGGCCCCTGGAGCATG GGCGTGACCCAGGTTCACTTCGGCGGCGGCTATGCAGCAGAGCAGTGGTTCGAGATCCTGGAGCGGGAAGAGGTTTCGGT CTGGTACACTGCGCCGACTGCCCTGCGAATGCTCATGAGGGAGGAACCGCTCCTTTTCGCCCGCTTTGACCTCGGCATGC TCCGGCATATTTGCAGTGTTGGCGAGCCGCTCAACCCGGAGGTGATCCACTGGGCCCGCCGCGTTCTGGCAAAAGAGGTT TATGATACCTGGTTCCAGACCGAAACCGGCGCCATTATGATTGCCAACCGTCCGGGAATCCCGGTGAAACCGGGTTCCAT GGGGAAGCCGGTGGATGGCATCGAGGCGGTTGTCATATCCACCGAGGGGGAACTCCTCGGCTCCGGCCAACAGGGGGACC TGTGCCTCAAGCCGGGATGGGCTTCCATGTTCTCCTCTTACCTGAACAACGCCGGTGCCTATGCATCAAAGTTCAGGAAC GGCTTCTACTGCACGGGTGATGTCGCCTATCGCGATACCGACGGATATTTCTGGTTCGTCGGCAGGAGCGACGATGTTAT CAATACGGCTGGGCATCTCATCAGCCCCTTCGAGATCGAGAGCGCGCTCATCGAGGTCCACGAGGTGGCTGAGGCAGGGG TGATCGGTGCCCCCGACGAACTGCTCTACGAAAAGGTCGTGGCCTTTGTATCCCTCCACCTGGGGTATGCCTTGACCGAC GAACTCCAGTTGAAGATTCGGCTTCACCTGGCCAACAAGCTTTCTTCGGTTGCAACCCCCCACGAGATCCACTGCCTCGA ACGGATTCCCAAGAACAAGAGCGGCAAGATCATGCGCCGCTACCTGAAGGCAACCTACCTGGGGCAGGACGCCGGGGACA TCTCTACCATGGAGGAATGA
Upstream 100 bases:
>100_bases ATTGCCTGCATGGACGCCATCACCCCTGAAGAGGTGATGACCGAACTGGCTGGATTGCTGGAAACGGGAGGTCGACCATG AGCAGTTTTGCGGGGAAAGC
Downstream 100 bases:
>100_bases ACTATGCCGACCCTGGACGCACTCACCCCGATCTTCCGCCAGGTTTTCGACGACGACAGCATCGTCCTGACCCGCGAGAC TTCGGCCAATGACATCGATG
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acetyl-CoA synthase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MLIENGQYNIGDICTSRQCRLGRGDRVAMRWLTPGMERRDYTFNELDGLSGRFANVLASLGVGAGEVFFTYLPKQPEQFV AFLGALKLTAVAGTLFSNFGEEALLDRLADARACGIITKKSLLRKIIRIRPQLPDLRFIILVDSDDHQADGIFSYSRLMA EASPAFVTPLTPADAPSVLHYTSGSTGKPKGVLHRHGAVTMINSTAQLVLGLREDDVYWCTADQGWVTGTSYGIIGPWSM GVTQVHFGGGYAAEQWFEILEREEVSVWYTAPTALRMLMREEPLLFARFDLGMLRHICSVGEPLNPEVIHWARRVLAKEV YDTWFQTETGAIMIANRPGIPVKPGSMGKPVDGIEAVVISTEGELLGSGQQGDLCLKPGWASMFSSYLNNAGAYASKFRN GFYCTGDVAYRDTDGYFWFVGRSDDVINTAGHLISPFEIESALIEVHEVAEAGVIGAPDELLYEKVVAFVSLHLGYALTD ELQLKIRLHLANKLSSVATPHEIHCLERIPKNKSGKIMRRYLKATYLGQDAGDISTMEE
Sequences:
>Translated_539_residues MLIENGQYNIGDICTSRQCRLGRGDRVAMRWLTPGMERRDYTFNELDGLSGRFANVLASLGVGAGEVFFTYLPKQPEQFV AFLGALKLTAVAGTLFSNFGEEALLDRLADARACGIITKKSLLRKIIRIRPQLPDLRFIILVDSDDHQADGIFSYSRLMA EASPAFVTPLTPADAPSVLHYTSGSTGKPKGVLHRHGAVTMINSTAQLVLGLREDDVYWCTADQGWVTGTSYGIIGPWSM GVTQVHFGGGYAAEQWFEILEREEVSVWYTAPTALRMLMREEPLLFARFDLGMLRHICSVGEPLNPEVIHWARRVLAKEV YDTWFQTETGAIMIANRPGIPVKPGSMGKPVDGIEAVVISTEGELLGSGQQGDLCLKPGWASMFSSYLNNAGAYASKFRN GFYCTGDVAYRDTDGYFWFVGRSDDVINTAGHLISPFEIESALIEVHEVAEAGVIGAPDELLYEKVVAFVSLHLGYALTD ELQLKIRLHLANKLSSVATPHEIHCLERIPKNKSGKIMRRYLKATYLGQDAGDISTMEE >Mature_539_residues MLIENGQYNIGDICTSRQCRLGRGDRVAMRWLTPGMERRDYTFNELDGLSGRFANVLASLGVGAGEVFFTYLPKQPEQFV AFLGALKLTAVAGTLFSNFGEEALLDRLADARACGIITKKSLLRKIIRIRPQLPDLRFIILVDSDDHQADGIFSYSRLMA EASPAFVTPLTPADAPSVLHYTSGSTGKPKGVLHRHGAVTMINSTAQLVLGLREDDVYWCTADQGWVTGTSYGIIGPWSM GVTQVHFGGGYAAEQWFEILEREEVSVWYTAPTALRMLMREEPLLFARFDLGMLRHICSVGEPLNPEVIHWARRVLAKEV YDTWFQTETGAIMIANRPGIPVKPGSMGKPVDGIEAVVISTEGELLGSGQQGDLCLKPGWASMFSSYLNNAGAYASKFRN GFYCTGDVAYRDTDGYFWFVGRSDDVINTAGHLISPFEIESALIEVHEVAEAGVIGAPDELLYEKVVAFVSLHLGYALTD ELQLKIRLHLANKLSSVATPHEIHCLERIPKNKSGKIMRRYLKATYLGQDAGDISTMEE
Specific function: Has a role in growth and sporulation on acetate [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=573, Percent_Identity=34.5549738219895, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI28416953, Length=564, Percent_Identity=32.4468085106383, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI253970489, Length=585, Percent_Identity=33.5042735042735, Blast_Score=274, Evalue=2e-73, Organism=Homo sapiens, GI42544132, Length=527, Percent_Identity=30.1707779886148, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI122937307, Length=506, Percent_Identity=31.4229249011858, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI38505220, Length=533, Percent_Identity=30.0187617260788, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI115511026, Length=519, Percent_Identity=29.0944123314065, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI58082049, Length=507, Percent_Identity=28.4023668639053, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI13375727, Length=578, Percent_Identity=28.2006920415225, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI157311624, Length=507, Percent_Identity=27.810650887574, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI157311622, Length=507, Percent_Identity=27.810650887574, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI42544134, Length=337, Percent_Identity=26.7062314540059, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI195947378, Length=419, Percent_Identity=25.0596658711217, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI187761345, Length=379, Percent_Identity=27.4406332453826, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI187761343, Length=379, Percent_Identity=27.4406332453826, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI31982927, Length=551, Percent_Identity=22.5045372050817, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI156151445, Length=415, Percent_Identity=24.8192771084337, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1790505, Length=569, Percent_Identity=34.2706502636204, Blast_Score=307, Evalue=1e-84, Organism=Escherichia coli, GI1786529, Length=536, Percent_Identity=29.4776119402985, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI221142682, Length=506, Percent_Identity=25.6916996047431, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI145693145, Length=507, Percent_Identity=23.2741617357002, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786810, Length=513, Percent_Identity=23.1968810916179, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788107, Length=525, Percent_Identity=24.5714285714286, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71983001, Length=579, Percent_Identity=32.2970639032815, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI71982997, Length=579, Percent_Identity=32.2970639032815, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17569507, Length=557, Percent_Identity=23.5188509874327, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560308, Length=355, Percent_Identity=26.7605633802817, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17559526, Length=517, Percent_Identity=24.5647969052224, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17558820, Length=353, Percent_Identity=27.1954674220963, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17531443, Length=541, Percent_Identity=23.2902033271719, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI32563687, Length=498, Percent_Identity=22.8915662650602, Blast_Score=96, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71994694, Length=353, Percent_Identity=24.6458923512748, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71994703, Length=353, Percent_Identity=24.6458923512748, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994690, Length=353, Percent_Identity=24.6458923512748, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560140, Length=351, Percent_Identity=24.7863247863248, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71985884, Length=358, Percent_Identity=22.0670391061453, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323182, Length=582, Percent_Identity=32.6460481099656, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6319264, Length=573, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6319699, Length=366, Percent_Identity=27.0491803278689, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI24667955, Length=585, Percent_Identity=33.5042735042735, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI62472339, Length=554, Percent_Identity=33.3935018050542, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI24667959, Length=516, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21355225, Length=558, Percent_Identity=28.494623655914, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581924, Length=417, Percent_Identity=27.0983213429257, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355181, Length=522, Percent_Identity=23.5632183908046, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI21356441, Length=352, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24648260, Length=375, Percent_Identity=26.1333333333333, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI21356947, Length=388, Percent_Identity=23.7113402061856, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI18859661, Length=518, Percent_Identity=23.9382239382239, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI20130357, Length=363, Percent_Identity=25.068870523416, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648257, Length=354, Percent_Identity=25.9887005649718, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648253, Length=302, Percent_Identity=26.8211920529801, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24648255, Length=302, Percent_Identity=26.8211920529801, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24656500, Length=408, Percent_Identity=24.2647058823529, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI21358303, Length=308, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24653035, Length=352, Percent_Identity=23.0113636363636, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI161076582, Length=357, Percent_Identity=22.96918767507, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19922652, Length=505, Percent_Identity=20.7920792079208, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 59490; Mature: 59490
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIENGQYNIGDICTSRQCRLGRGDRVAMRWLTPGMERRDYTFNELDGLSGRFANVLASL CEECCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHH GVGAGEVFFTYLPKQPEQFVAFLGALKLTAVAGTLFSNFGEEALLDRLADARACGIITKK CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SLLRKIIRIRPQLPDLRFIILVDSDDHQADGIFSYSRLMAEASPAFVTPLTPADAPSVLH HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEE YTSGSTGKPKGVLHRHGAVTMINSTAQLVLGLREDDVYWCTADQGWVTGTSYGIIGPWSM ECCCCCCCCCCCEECCCCEEEECCCEEEEEEECCCCEEEEECCCCEEECCCCCEECCCCC GVTQVHFGGGYAAEQWFEILEREEVSVWYTAPTALRMLMREEPLLFARFDLGMLRHICSV CEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCEEEEHHHHHHHHHHHC GEPLNPEVIHWARRVLAKEVYDTWFQTETGAIMIANRPGIPVKPGSMGKPVDGIEAVVIS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEE TEGELLGSGQQGDLCLKPGWASMFSSYLNNAGAYASKFRNGFYCTGDVAYRDTDGYFWFV CCCCEECCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEECCCEEEEE GRSDDVINTAGHLISPFEIESALIEVHEVAEAGVIGAPDELLYEKVVAFVSLHLGYALTD ECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEECC ELQLKIRLHLANKLSSVATPHEIHCLERIPKNKSGKIMRRYLKATYLGQDAGDISTMEE CEEEEEEEEEHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLIENGQYNIGDICTSRQCRLGRGDRVAMRWLTPGMERRDYTFNELDGLSGRFANVLASL CEECCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHH GVGAGEVFFTYLPKQPEQFVAFLGALKLTAVAGTLFSNFGEEALLDRLADARACGIITKK CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SLLRKIIRIRPQLPDLRFIILVDSDDHQADGIFSYSRLMAEASPAFVTPLTPADAPSVLH HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEE YTSGSTGKPKGVLHRHGAVTMINSTAQLVLGLREDDVYWCTADQGWVTGTSYGIIGPWSM ECCCCCCCCCCCEECCCCEEEECCCEEEEEEECCCCEEEEECCCCEEECCCCCEECCCCC GVTQVHFGGGYAAEQWFEILEREEVSVWYTAPTALRMLMREEPLLFARFDLGMLRHICSV CEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCEEEEHHHHHHHHHHHC GEPLNPEVIHWARRVLAKEVYDTWFQTETGAIMIANRPGIPVKPGSMGKPVDGIEAVVIS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEE TEGELLGSGQQGDLCLKPGWASMFSSYLNNAGAYASKFRNGFYCTGDVAYRDTDGYFWFV CCCCEECCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEECCCEEEEE GRSDDVINTAGHLISPFEIESALIEVHEVAEAGVIGAPDELLYEKVVAFVSLHLGYALTD ECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEECC ELQLKIRLHLANKLSSVATPHEIHCLERIPKNKSGKIMRRYLKATYLGQDAGDISTMEE CEEEEEEEEEHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934817; 9387221; 9384377 [H]