| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223525
Identifier: 78223525
GI number: 78223525
Start: 2630843
End: 2631445
Strand: Reverse
Name: 78223525
Synonym: Gmet_2322
Alternate gene names: NA
Gene position: 2631445-2630843 (Counterclockwise)
Preceding gene: 78223527
Following gene: 78223520
Centisome position: 65.83
GC content: 56.72
Gene sequence:
>603_bases ATGGCGCTCTTTTTTCGTGGCCTTTTCTCGCTTTTGGTGATCTTTCTGGTAGTGGCGACGGTCCTCTTCGTGGACTTCGC CTACAAGACCTTTTCCGTGCGGCAGCGTGACATCGCCACCGACGCCATCGTGGTCCTTGCCGGGGGACGGGGGAGAGTGG AAGAGGGGATACGGCTCTTCAGGGCGAAGAAGGGAAAGTACCTCTTTCTCATCGGGGTCGACCCCATGGTGCGGAAGCAG GAACTCTTCCAGGAGCGGAAGGGGGAAAGCCTCGCCGACCGGGTGGTCCTGGAAAATGCATCGCGGAACACTCTGGAAAA TGCCCTTTATGGCAGGGAGATCATTGATCGAAAGGATATCCGCTCGATTAGTCTCATCACTTCCCGCTACCACATGAAAC GGGCGACCCTCATCTTCAGGAGCACGCTTCCCCGGGACATAGCCATCTACCCCCATCCGGTCGATACGATCAATCTCAAG GAAGCGTGGTGGCGTGACCAGGGGAGTTTCCGGCTCCTCTTCAGCGAGTTCTACAAGTACTGCCTCTTCAGGTTCTTCTT TCTTTTCGCCTCTGGAGAACTGAGACCACCTGCGGGACCGTAG
Upstream 100 bases:
>100_bases TCTCGACATGGCTCTACTCCCTCTCGATGGTTTCTGAAGCTCTCTCTTATAGCAGACAGTAACCGGCTTTGCAAGTGAAA TATTCTGGTAAGGTGGTGCA
Downstream 100 bases:
>100_bases GGTCTGCGCTTGCTCCATGGGGGCAGCAATACGGGCGCAGCAAGCAGCGCCCCTCATTGTACCTATTCGGCTTTGTCTTC GATTCGCGGGAAAAGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLFRAKKGKYLFLIGVDPMVRKQ ELFQERKGESLADRVVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLK EAWWRDQGSFRLLFSEFYKYCLFRFFFLFASGELRPPAGP
Sequences:
>Translated_200_residues MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLFRAKKGKYLFLIGVDPMVRKQ ELFQERKGESLADRVVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLK EAWWRDQGSFRLLFSEFYKYCLFRFFFLFASGELRPPAGP >Mature_199_residues ALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLFRAKKGKYLFLIGVDPMVRKQE LFQERKGESLADRVVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKE AWWRDQGSFRLLFSEFYKYCLFRFFFLFASGELRPPAGP
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23244; Mature: 23112
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH RAKKGKYLFLIGVDPMVRKQELFQERKGESLADRVVLENASRNTLENALYGREIIDRKDI HHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH RSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKEAWWRDQGSFRLLFSEFYKY HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEHHHHHHHHH CLFRFFFLFASGELRPPAGP HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH RAKKGKYLFLIGVDPMVRKQELFQERKGESLADRVVLENASRNTLENALYGREIIDRKDI HHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH RSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKEAWWRDQGSFRLLFSEFYKY HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEHHHHHHHHH CLFRFFFLFASGELRPPAGP HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA