| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223494
Identifier: 78223494
GI number: 78223494
Start: 2597141
End: 2597626
Strand: Reverse
Name: 78223494
Synonym: Gmet_2291
Alternate gene names: NA
Gene position: 2597626-2597141 (Counterclockwise)
Preceding gene: 78223495
Following gene: 78223493
Centisome position: 64.98
GC content: 53.91
Gene sequence:
>486_bases ATGAACGTTATCGACTGTGCGCTCAAGATGGAGGAGGAGGCTGCTGCACATTACATACAACTGGCGGCGGCTTCTTCTGT TGATGAGTTGCAGCGCATTTTCAGTATGCTGGCGGCGGCGGAAAAGGAGCACCATGCTACCCTCTTGTCCATGCTGGGTA ATATTGATCCGGCAAAGGCGGAATTCAAGGCCCTCGACGAGGCTGCATGCGCCTTCAAACCGCTCCTCGGCAAGCGTGAC CTGGTGTCTGAACTGCTGAAGGATCCTGACGGATACCAGCACGTGGTGAGGGAAGAGGAGGCAAGCATCAAATTCTACGA GGAACTTGCTGGCAAGGCTGACAACGAGGAGACCCGCGCTCTGTTGAAGAAGCTGGCCGATGAGGAACGGCGACACCTGA GCATCGTGGAAAATATTTACTCGTTCGTGGAAAATCCGAAGACCTATCTTGCGTGGGGAGAGTTCAGCAACCTGAAGGAA TACTGA
Upstream 100 bases:
>100_bases GGCGCCTTTTTCTTTTTTTCGGACCCACCTGAAAATACGGAGTGATTTGGTATTATTTCAGTAGAGAGAGTAAATCAAAC CAGGGAAAGGGGGCTTGTGT
Downstream 100 bases:
>100_bases AACGAACAATTTCCCAGCCCGCGCGTAAAAGCCCGCCCAGAGACGGGCTTTTTTATTGCGGCCAAGCCGTGAAACGCTCT ATAGTTATTAGGTTGCTTCA
Product: rubrerythrin
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNVIDCALKMEEEAAAHYIQLAAASSVDELQRIFSMLAAAEKEHHATLLSMLGNIDPAKAEFKALDEAACAFKPLLGKRD LVSELLKDPDGYQHVVREEEASIKFYEELAGKADNEETRALLKKLADEERRHLSIVENIYSFVENPKTYLAWGEFSNLKE Y
Sequences:
>Translated_161_residues MNVIDCALKMEEEAAAHYIQLAAASSVDELQRIFSMLAAAEKEHHATLLSMLGNIDPAKAEFKALDEAACAFKPLLGKRD LVSELLKDPDGYQHVVREEEASIKFYEELAGKADNEETRALLKKLADEERRHLSIVENIYSFVENPKTYLAWGEFSNLKE Y >Mature_161_residues MNVIDCALKMEEEAAAHYIQLAAASSVDELQRIFSMLAAAEKEHHATLLSMLGNIDPAKAEFKALDEAACAFKPLLGKRD LVSELLKDPDGYQHVVREEEASIKFYEELAGKADNEETRALLKKLADEERRHLSIVENIYSFVENPKTYLAWGEFSNLKE Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18177; Mature: 18177
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIDCALKMEEEAAAHYIQLAAASSVDELQRIFSMLAAAEKEHHATLLSMLGNIDPAKA CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH EFKALDEAACAFKPLLGKRDLVSELLKDPDGYQHVVREEEASIKFYEELAGKADNEETRA HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLKKLADEERRHLSIVENIYSFVENPKTYLAWGEFSNLKEY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure MNVIDCALKMEEEAAAHYIQLAAASSVDELQRIFSMLAAAEKEHHATLLSMLGNIDPAKA CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH EFKALDEAACAFKPLLGKRDLVSELLKDPDGYQHVVREEEASIKFYEELAGKADNEETRA HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLKKLADEERRHLSIVENIYSFVENPKTYLAWGEFSNLKEY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA