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The map label for this gene is etfB [H]

Identifier: 78223470

GI number: 78223470

Start: 2567329

End: 2568111

Strand: Reverse

Name: etfB [H]

Synonym: Gmet_2266

Alternate gene names: 78223470

Gene position: 2568111-2567329 (Counterclockwise)

Preceding gene: 78223471

Following gene: 78223469

Centisome position: 64.24

GC content: 55.17

Gene sequence:

>783_bases
ATGGAAATTCTGGTTTGTGTCACGAGGGTACCTGATACCGCTGAAAACGAAATCGAAGTCAATGCCGACGGCAGTGACAT
CGAAAGGGATTCGTTGGTCTATTCGGTCAACGAATGGGACAACTACGCGGTCGAGGAGGCAATCAGGATAAAGGAAAGCT
CGGGCGGTTCCGTGACCGTTGTGACTGTCGGTGACGGGGAATCAGAGGAAGTGTTGCGTCGCGAGATGGCTATGGGCGCT
GATCGAGGCATTCTCCTGCAAGACGAATCATTCGCGGGAACGGATGGAAGAGGGCTCGCCACAATTCTGAAGGCCGAGAT
CGAAAAAGGGAAATACGACCTGATCCTCGCTGGTGCTCAGGCCGACGCCGGGGCAGGAGAAGTCGGGGGTATGCTGGCAG
CCCTCCTTGATTTCCCCTACGCCTCACTGGTAAACAGCATCGAGATCGTCGATGACAAGACCCTGAAAGTCGGACGGGAA
GTTGATGGGGGAAATATCGAAATGAACCGGATATCGCTGCCGTGCGTGCTGTCGATTCAGACAGGCATAAACGAGCCGCG
CTATGTAGGCATCCGCGGCATCCGCCAGGTGGCATCGGTGCAGATTCCGGTGCATGGGGCCGGTGAGCTGGGGCTGTCAA
CGGCAGCAGTTGAACCTCGTGTACGCAGGGAGGACTATTTTGTCCCCGAATTGGGTGCCGGTGCCGAGATGCTTGATGGG
AGCAACGAAGAAATAATCGATAAACTGGTCGAAATGCTCAAAGCCAAAGGAGGGCTCAAATAA

Upstream 100 bases:

>100_bases
TGGAACTGGCCGATAGGCATCTTTCAGTAACGTAAAGCGTACAGAGAATGAACGAGTTCTCTCGTCAACGACGTGGAAAT
AATCTTTAACGGAGGCCTCT

Downstream 100 bases:

>100_bases
TGGCGGCTCAGATCTTTGCCTATATCAAGCATAAGGGTGGTGCGGTAGATGATACCGCTTTGGAATTGATCTCCGCGGCC
AGGAATATTGATGCGTCCGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEILVCVTRVPDTAENEIEVNADGSDIERDSLVYSVNEWDNYAVEEAIRIKESSGGSVTVVTVGDGESEEVLRREMAMGA
DRGILLQDESFAGTDGRGLATILKAEIEKGKYDLILAGAQADAGAGEVGGMLAALLDFPYASLVNSIEIVDDKTLKVGRE
VDGGNIEMNRISLPCVLSIQTGINEPRYVGIRGIRQVASVQIPVHGAGELGLSTAAVEPRVRREDYFVPELGAGAEMLDG
SNEEIIDKLVEMLKAKGGLK

Sequences:

>Translated_260_residues
MEILVCVTRVPDTAENEIEVNADGSDIERDSLVYSVNEWDNYAVEEAIRIKESSGGSVTVVTVGDGESEEVLRREMAMGA
DRGILLQDESFAGTDGRGLATILKAEIEKGKYDLILAGAQADAGAGEVGGMLAALLDFPYASLVNSIEIVDDKTLKVGRE
VDGGNIEMNRISLPCVLSIQTGINEPRYVGIRGIRQVASVQIPVHGAGELGLSTAAVEPRVRREDYFVPELGAGAEMLDG
SNEEIIDKLVEMLKAKGGLK
>Mature_260_residues
MEILVCVTRVPDTAENEIEVNADGSDIERDSLVYSVNEWDNYAVEEAIRIKESSGGSVTVVTVGDGESEEVLRREMAMGA
DRGILLQDESFAGTDGRGLATILKAEIEKGKYDLILAGAQADAGAGEVGGMLAALLDFPYASLVNSIEIVDDKTLKVGRE
VDGGNIEMNRISLPCVLSIQTGINEPRYVGIRGIRQVASVQIPVHGAGELGLSTAAVEPRVRREDYFVPELGAGAEMLDG
SNEEIIDKLVEMLKAKGGLK

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=257, Percent_Identity=34.6303501945525, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI62420877, Length=241, Percent_Identity=34.0248962655602, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI87081682, Length=221, Percent_Identity=29.8642533936652, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=198, Percent_Identity=34.3434343434343, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=195, Percent_Identity=36.9230769230769, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24651147, Length=261, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24651145, Length=261, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27752; Mature: 27752

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILVCVTRVPDTAENEIEVNADGSDIERDSLVYSVNEWDNYAVEEAIRIKESSGGSVTV
CEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHEEECCCCCEEEE
VTVGDGESEEVLRREMAMGADRGILLQDESFAGTDGRGLATILKAEIEKGKYDLILAGAQ
EEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC
ADAGAGEVGGMLAALLDFPYASLVNSIEIVDDKTLKVGREVDGGNIEMNRISLPCVLSIQ
CCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCEEEEEE
TGINEPRYVGIRGIRQVASVQIPVHGAGELGLSTAAVEPRVRREDYFVPELGAGAEMLDG
CCCCCCEEECHHHHHHHHEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCC
SNEEIIDKLVEMLKAKGGLK
CCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEILVCVTRVPDTAENEIEVNADGSDIERDSLVYSVNEWDNYAVEEAIRIKESSGGSVTV
CEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHEEECCCCCEEEE
VTVGDGESEEVLRREMAMGADRGILLQDESFAGTDGRGLATILKAEIEKGKYDLILAGAQ
EEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC
ADAGAGEVGGMLAALLDFPYASLVNSIEIVDDKTLKVGREVDGGNIEMNRISLPCVLSIQ
CCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCEEEEEE
TGINEPRYVGIRGIRQVASVQIPVHGAGELGLSTAAVEPRVRREDYFVPELGAGAEMLDG
CCCCCCEEECHHHHHHHHEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCC
SNEEIIDKLVEMLKAKGGLK
CCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]