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The map label for this gene is fadF [H]

Identifier: 78223471

GI number: 78223471

Start: 2568177

End: 2570255

Strand: Reverse

Name: fadF [H]

Synonym: Gmet_2267

Alternate gene names: 78223471

Gene position: 2570255-2568177 (Counterclockwise)

Preceding gene: 78223472

Following gene: 78223470

Centisome position: 64.3

GC content: 55.99

Gene sequence:

>2079_bases
ATGGAACAGACACTTGTTTCACCAGCTGCTGCGGCATTTTTCGGCATCCCCGGGTATCTGCTCTTTTCGCTGATCCCCCT
TGTCGGAATCGGAGCATTTGCCTACATCATAGGTAAACGATTGTCCCCCCTTTTGAAAGGGGAGCCTGACCCACGAATCA
ACGAGGTGCCGGAACGTATCGTCAAATTTCTCAAGTTCGGTATGCTGCAGTGGCGCCAGCCGAGGTACCTGTTTGCCGGT
GTCCTGCATATCCTGCTGTTTGCGGGGTTCCTTGTCCTGTCACTGGGATCCATATCGCTGGTGATCATTGGCATCAGGGA
CGGTTTTGTCCTGCCGGGTCTCGGGGGGAGAGCCGGTGTCGTCTATTCGGTTTTCAAGGACTTTGCCGCAACCATCGTGC
TGATAGTCGCCATCACAGCAGCTATCCGCAGGGGAGTATTCAAGCCCAAGCGCTATGACGTCCCGAGCCGCTATGGAGAC
AAGGATCATACGGGCGAAGCGGTACTGGTGTTGCTTCTTATCGCTGCTCTTGTGACCTGCGACATGCTCTTTGAAGGGAG
CCGCGCTGCTGCCCAGTCCCAAGCCGGAGCTCTCCACCATCTGCTGGTTCCGGTGACCGGTTCGTGGGTCGCGGCGCAGT
TGTTCAGTTCCCTTTCTCCGACGCTGCTTCAGAAAATCCATCTGGGGAGTTACTTCCTGCATGAAGTGGTGTTCTTCTCC
TTCCTCTGTCTGCTCCCTTTCGGCAAGCATTTCCATGTTATCACCTCACTCCCCAATGTATTTCTCACCAAGCTCAGCAA
GGGAAGGATCAAGCCGGTACGCTGGGGGGTGACTGACGACGAGCTCGACGGCCTGGAATCGTTGGGAGTAAAGAAGTTAG
AGGATTTCAGCTGGAAGCATATGCTGGACTTTTACTCCTGCGTCGACTGCGGCCGCTGTTCGGACAACTGCCCTGCCAAT
GCGGTCGGCCGGCCGCTGTCGCCTCGGTTCATCTCGATCAAATGCCGGGATTACGCCTTTAATCGGTATCCCTTGTTCGG
AGATGGGGGGAACCAGGACGAACGTCTGATCGGAACGGTGCTCCACGAGGATGAAATTTGGTCCTGTACTACTTGTGGGG
CCTGCGAGGAGGAGTGCCCCGTTCTGATCGAATACATCGATAAGATCGTTGATCTCCGTAGAGGCATGGTCGACGAGGGG
ATGGTGCCGCAGTCACTCCAGAAACCGTTGGGTGCATTGGAGAAACGCGGCAACCCGTGGGGCAAGCTGGAGAAAAAACG
TGCGGACTGGACCAAGGAGGCCGAGTTTGCCGCCAACTATCCGGTGAAGGTGTTTGATGGTCAACAGCAGGCCGATACGC
TCTACTTTGTAGACAGTATTACCTCCTATGACGACCGGATGCAGGAGATCGGGCGAGCTACGGCCAGAGTGCTCACCGCG
GCAGGGATCGATTTCGGTATTCTCGGTGCGGATGAGCGCGACAGCGGTAACGAAGTGCTCCGTTTTGGCGAGGAAACCCT
TTATCAGACGCTCAAGGCCCACAACATGGAAGTCATAAAGGAGACCGGTGTCCGCCAGATTGTTACTGCCGACCCCCATG
CTTTCAATGCGCTCAAAAACGACTACCAGGGACTCCCACCTGTGGAGCACATTAGCCAGACTATCATGAAGAGCCTCAGC
TCGGGGAGGATCAGGTTCAGTGCGGTCGAAGATCCCGCGAAGGTCTACACCTTCCATGACCCGTGTTACCTTGGCAGGCA
CAATGAGCTCTATGACGATCCCCGTGGGGTGCTTGACGCTATTCCCGGCTTGCGGAAGGTTGAAATGGACAGGTGCCGCG
ACCGTTCATTCTGCTGTGGTGGCGGTGGGCTGATGCTGTTTTTCGAGCCGGAGGAAGAGCAGCGCATGGGTGTGCTGCGG
GTCAAGATGGCACAGGAGGCGGGGGCCAATGTGATCGTCACGGCATGCCCGTTCTGTATGGTCAATATCGAGGATGCCAT
CAAGGTCAGCGGACTGGAAGGAACGATGGAGGTCATTGACCTAGTGGAACTGGCCGATAGGCATCTTTCAGTAACGTAA

Upstream 100 bases:

>100_bases
ATCAGCGTTGATGAGAGTTGTCTGTAGAAGGAAAGAAGCTTTTTGATCAGAGACAGATGTGCGACGGTTCATTCTTAGTG
TCGCCGAGAGTGAGAGAACC

Downstream 100 bases:

>100_bases
AGCGTACAGAGAATGAACGAGTTCTCTCGTCAACGACGTGGAAATAATCTTTAACGGAGGCCTCTATGGAAATTCTGGTT
TGTGTCACGAGGGTACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MEQTLVSPAAAAFFGIPGYLLFSLIPLVGIGAFAYIIGKRLSPLLKGEPDPRINEVPERIVKFLKFGMLQWRQPRYLFAG
VLHILLFAGFLVLSLGSISLVIIGIRDGFVLPGLGGRAGVVYSVFKDFAATIVLIVAITAAIRRGVFKPKRYDVPSRYGD
KDHTGEAVLVLLLIAALVTCDMLFEGSRAAAQSQAGALHHLLVPVTGSWVAAQLFSSLSPTLLQKIHLGSYFLHEVVFFS
FLCLLPFGKHFHVITSLPNVFLTKLSKGRIKPVRWGVTDDELDGLESLGVKKLEDFSWKHMLDFYSCVDCGRCSDNCPAN
AVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLIGTVLHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEG
MVPQSLQKPLGALEKRGNPWGKLEKKRADWTKEAEFAANYPVKVFDGQQQADTLYFVDSITSYDDRMQEIGRATARVLTA
AGIDFGILGADERDSGNEVLRFGEETLYQTLKAHNMEVIKETGVRQIVTADPHAFNALKNDYQGLPPVEHISQTIMKSLS
SGRIRFSAVEDPAKVYTFHDPCYLGRHNELYDDPRGVLDAIPGLRKVEMDRCRDRSFCCGGGGLMLFFEPEEEQRMGVLR
VKMAQEAGANVIVTACPFCMVNIEDAIKVSGLEGTMEVIDLVELADRHLSVT

Sequences:

>Translated_692_residues
MEQTLVSPAAAAFFGIPGYLLFSLIPLVGIGAFAYIIGKRLSPLLKGEPDPRINEVPERIVKFLKFGMLQWRQPRYLFAG
VLHILLFAGFLVLSLGSISLVIIGIRDGFVLPGLGGRAGVVYSVFKDFAATIVLIVAITAAIRRGVFKPKRYDVPSRYGD
KDHTGEAVLVLLLIAALVTCDMLFEGSRAAAQSQAGALHHLLVPVTGSWVAAQLFSSLSPTLLQKIHLGSYFLHEVVFFS
FLCLLPFGKHFHVITSLPNVFLTKLSKGRIKPVRWGVTDDELDGLESLGVKKLEDFSWKHMLDFYSCVDCGRCSDNCPAN
AVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLIGTVLHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEG
MVPQSLQKPLGALEKRGNPWGKLEKKRADWTKEAEFAANYPVKVFDGQQQADTLYFVDSITSYDDRMQEIGRATARVLTA
AGIDFGILGADERDSGNEVLRFGEETLYQTLKAHNMEVIKETGVRQIVTADPHAFNALKNDYQGLPPVEHISQTIMKSLS
SGRIRFSAVEDPAKVYTFHDPCYLGRHNELYDDPRGVLDAIPGLRKVEMDRCRDRSFCCGGGGLMLFFEPEEEQRMGVLR
VKMAQEAGANVIVTACPFCMVNIEDAIKVSGLEGTMEVIDLVELADRHLSVT
>Mature_692_residues
MEQTLVSPAAAAFFGIPGYLLFSLIPLVGIGAFAYIIGKRLSPLLKGEPDPRINEVPERIVKFLKFGMLQWRQPRYLFAG
VLHILLFAGFLVLSLGSISLVIIGIRDGFVLPGLGGRAGVVYSVFKDFAATIVLIVAITAAIRRGVFKPKRYDVPSRYGD
KDHTGEAVLVLLLIAALVTCDMLFEGSRAAAQSQAGALHHLLVPVTGSWVAAQLFSSLSPTLLQKIHLGSYFLHEVVFFS
FLCLLPFGKHFHVITSLPNVFLTKLSKGRIKPVRWGVTDDELDGLESLGVKKLEDFSWKHMLDFYSCVDCGRCSDNCPAN
AVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLIGTVLHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEG
MVPQSLQKPLGALEKRGNPWGKLEKKRADWTKEAEFAANYPVKVFDGQQQADTLYFVDSITSYDDRMQEIGRATARVLTA
AGIDFGILGADERDSGNEVLRFGEETLYQTLKAHNMEVIKETGVRQIVTADPHAFNALKNDYQGLPPVEHISQTIMKSLS
SGRIRFSAVEDPAKVYTFHDPCYLGRHNELYDDPRGVLDAIPGLRKVEMDRCRDRSFCCGGGGLMLFFEPEEEQRMGVLR
VKMAQEAGANVIVTACPFCMVNIEDAIKVSGLEGTMEVIDLVELADRHLSVT

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 76676; Mature: 76676

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTLVSPAAAAFFGIPGYLLFSLIPLVGIGAFAYIIGKRLSPLLKGEPDPRINEVPERI
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VKFLKFGMLQWRQPRYLFAGVLHILLFAGFLVLSLGSISLVIIGIRDGFVLPGLGGRAGV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCCCHHH
VYSVFKDFAATIVLIVAITAAIRRGVFKPKRYDVPSRYGDKDHTGEAVLVLLLIAALVTC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DMLFEGSRAAAQSQAGALHHLLVPVTGSWVAAQLFSSLSPTLLQKIHLGSYFLHEVVFFS
HHHHCCCHHHHHHHHCCHHHEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FLCLLPFGKHFHVITSLPNVFLTKLSKGRIKPVRWGVTDDELDGLESLGVKKLEDFSWKH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHCCHHHCCCHHHHHCCHHH
MLDFYSCVDCGRCSDNCPANAVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLIGTV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHH
LHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEGMVPQSLQKPLGALEKRGNPW
HCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
GKLEKKRADWTKEAEFAANYPVKVFDGQQQADTLYFVDSITSYDDRMQEIGRATARVLTA
HHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
AGIDFGILGADERDSGNEVLRFGEETLYQTLKAHNMEVIKETGVRQIVTADPHAFNALKN
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCHHHHHHHH
DYQGLPPVEHISQTIMKSLSSGRIRFSAVEDPAKVYTFHDPCYLGRHNELYDDPRGVLDA
HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEECCCCCCCCCHHHHHHH
IPGLRKVEMDRCRDRSFCCGGGGLMLFFEPEEEQRMGVLRVKMAQEAGANVIVTACPFCM
CCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCE
VNIEDAIKVSGLEGTMEVIDLVELADRHLSVT
EEHHHHHEECCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQTLVSPAAAAFFGIPGYLLFSLIPLVGIGAFAYIIGKRLSPLLKGEPDPRINEVPERI
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VKFLKFGMLQWRQPRYLFAGVLHILLFAGFLVLSLGSISLVIIGIRDGFVLPGLGGRAGV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCCCHHH
VYSVFKDFAATIVLIVAITAAIRRGVFKPKRYDVPSRYGDKDHTGEAVLVLLLIAALVTC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DMLFEGSRAAAQSQAGALHHLLVPVTGSWVAAQLFSSLSPTLLQKIHLGSYFLHEVVFFS
HHHHCCCHHHHHHHHCCHHHEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FLCLLPFGKHFHVITSLPNVFLTKLSKGRIKPVRWGVTDDELDGLESLGVKKLEDFSWKH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHCCHHHCCCHHHHHCCHHH
MLDFYSCVDCGRCSDNCPANAVGRPLSPRFISIKCRDYAFNRYPLFGDGGNQDERLIGTV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHH
LHEDEIWSCTTCGACEEECPVLIEYIDKIVDLRRGMVDEGMVPQSLQKPLGALEKRGNPW
HCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
GKLEKKRADWTKEAEFAANYPVKVFDGQQQADTLYFVDSITSYDDRMQEIGRATARVLTA
HHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
AGIDFGILGADERDSGNEVLRFGEETLYQTLKAHNMEVIKETGVRQIVTADPHAFNALKN
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCHHHHHHHH
DYQGLPPVEHISQTIMKSLSSGRIRFSAVEDPAKVYTFHDPCYLGRHNELYDDPRGVLDA
HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEECCCCCCCCCHHHHHHH
IPGLRKVEMDRCRDRSFCCGGGGLMLFFEPEEEQRMGVLRVKMAQEAGANVIVTACPFCM
CCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCE
VNIEDAIKVSGLEGTMEVIDLVELADRHLSVT
EEHHHHHEECCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]