| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223458
Identifier: 78223458
GI number: 78223458
Start: 2551514
End: 2552194
Strand: Reverse
Name: 78223458
Synonym: Gmet_2254
Alternate gene names: NA
Gene position: 2552194-2551514 (Counterclockwise)
Preceding gene: 78223459
Following gene: 78223457
Centisome position: 63.85
GC content: 45.96
Gene sequence:
>681_bases GTGTGTGAAAGTGGTCTGGGGCTAATCATATATGGTGTCGCTATTTTGCACTTGACAGCGTGCGGTTGTATGTTAATAAT ATACCGAACGGTCGATATAGATGGTTTGCGCGGGAGAAGATATTGTTACAAATATATGGGGCATGGGTTGGTTAGTGCTC GGTTACCGATAACTAGGCTGAGAGGGAAGGCTGAGAACGGAGGTGAAACAATGTATGAGAACAAGGATGAAGGCGTATTT GAGACTGTGTTGAAAAAGGCGGTCAAATTTGAGACTGACAACATCCACAACTATCTGGACGCTATGAACATAGTGCGGAA TGAATGGGCTAAGAAAACGCTCAGGCGGGTCGCCCTTGCGAAACTGGTTCATAAAAACCGTCTGGAAAAGGCCTTGATAA AGGGAAGATTGGAGAGTTCTGCCTTAACCCGGCCGGTTCCGACTATGAACCTCCATTATGTCTTGCCCAAAAAAATGCTT CATTCTGATTCGGACGCACGTGAGGCGTTAGCCTATGCCATCCATGTGGAAAAGGGGGCTATTGATTTTTACAATCATAT GGCCAATGAGAGTGGCGGGGCGCAGAACGATGTCCTGTTCGGACAGCTATTGGCAGAGGAATCACTCCATCTTCAAATAC TGGAAGATCTCTACGAAGAATACTTTTTACCCGAGAATTGA
Upstream 100 bases:
>100_bases GCTCGTATCGGACGTCTATTTCTGTACCCAGGTGACGATACCTCCACCATCAAGTCTGTTTCGCATCAACACACAAGATG ACACCCTGACGTACAAATGA
Downstream 100 bases:
>100_bases TTTTCTGATCATATTTAAATCTATTATATTGCAATGACAGTATCTTAAGATTTGGGAGTAACCTTGCTTGGAAAACAGTG CGCTTTTAACAGAGCTTGAG
Product: rubrerythrin
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MCESGLGLIIYGVAILHLTACGCMLIIYRTVDIDGLRGRRYCYKYMGHGLVSARLPITRLRGKAENGGETMYENKDEGVF ETVLKKAVKFETDNIHNYLDAMNIVRNEWAKKTLRRVALAKLVHKNRLEKALIKGRLESSALTRPVPTMNLHYVLPKKML HSDSDAREALAYAIHVEKGAIDFYNHMANESGGAQNDVLFGQLLAEESLHLQILEDLYEEYFLPEN
Sequences:
>Translated_226_residues MCESGLGLIIYGVAILHLTACGCMLIIYRTVDIDGLRGRRYCYKYMGHGLVSARLPITRLRGKAENGGETMYENKDEGVF ETVLKKAVKFETDNIHNYLDAMNIVRNEWAKKTLRRVALAKLVHKNRLEKALIKGRLESSALTRPVPTMNLHYVLPKKML HSDSDAREALAYAIHVEKGAIDFYNHMANESGGAQNDVLFGQLLAEESLHLQILEDLYEEYFLPEN >Mature_226_residues MCESGLGLIIYGVAILHLTACGCMLIIYRTVDIDGLRGRRYCYKYMGHGLVSARLPITRLRGKAENGGETMYENKDEGVF ETVLKKAVKFETDNIHNYLDAMNIVRNEWAKKTLRRVALAKLVHKNRLEKALIKGRLESSALTRPVPTMNLHYVLPKKML HSDSDAREALAYAIHVEKGAIDFYNHMANESGGAQNDVLFGQLLAEESLHLQILEDLYEEYFLPEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25629; Mature: 25629
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCESGLGLIIYGVAILHLTACGCMLIIYRTVDIDGLRGRRYCYKYMGHGLVSARLPITRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCHHHH RGKAENGGETMYENKDEGVFETVLKKAVKFETDNIHNYLDAMNIVRNEWAKKTLRRVALA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVHKNRLEKALIKGRLESSALTRPVPTMNLHYVLPKKMLHSDSDAREALAYAIHVEKGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHCCCH IDFYNHMANESGGAQNDVLFGQLLAEESLHLQILEDLYEEYFLPEN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCESGLGLIIYGVAILHLTACGCMLIIYRTVDIDGLRGRRYCYKYMGHGLVSARLPITRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCHHHH RGKAENGGETMYENKDEGVFETVLKKAVKFETDNIHNYLDAMNIVRNEWAKKTLRRVALA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVHKNRLEKALIKGRLESSALTRPVPTMNLHYVLPKKMLHSDSDAREALAYAIHVEKGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHCCCH IDFYNHMANESGGAQNDVLFGQLLAEESLHLQILEDLYEEYFLPEN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA