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The map label for this gene is fadF [H]

Identifier: 78223459

GI number: 78223459

Start: 2552713

End: 2554680

Strand: Reverse

Name: fadF [H]

Synonym: Gmet_2255

Alternate gene names: 78223459

Gene position: 2554680-2552713 (Counterclockwise)

Preceding gene: 78223461

Following gene: 78223458

Centisome position: 63.91

GC content: 62.55

Gene sequence:

>1968_bases
ATGACACCCAATCCGACCATCTTCATCCCCCTCCTGCTCGTTTCTCTCGGTATCTTCGCCTGGGGATGCTGGCGCCGGCT
GAGCCTCGTGGCCGTCGGTACCGGCGAAGACCGCTTCGATAACCCCGGCCGGCGCATGGTGGAGATGCTCCGCTACGCCT
TTGGCCAGAAGCGGGTCGTCGCCCGCCCCTTCGGCATCAACCATGCGGTCATCTTCTGGTCGTTCCTCGTCCTGCTCATC
GCCAACGGGGAGTTCCTGCTCGACGGGGTGTTCCCCGCCGTCGCCCTGGATAAACTTCCCGCGGGAATCTATCACCCCCT
CATGCTGCTCTTGGATATCGTGTCGCTCCTGGCCCTGGTGGCCGTCTGCGTTGCAGCGGTGCGGCGGGTGGCGTCACCAC
CCTATCCCGAGGCCCGGACCGTCGAGGCCTTTGTCATTCTCGGCCTGATCGCCATCCTCATGCTTGCCTACTTCGGCCTG
CACGGAGCGGAGATTGCCCTAGGGAACGGGGCCGCCGCCCGGTTTATGCCGGTCTCCTCGGTTGTTGCCGGGCTGCTGCA
AGCCTCGCCTTTAGCCTTCAGCCTTCAGTCTGCCGCCTGGTTCTGCTGGTGGGCCCATGCCGTCGCCCTGCTCCTGTTCA
TGGCCTACCTTCCCAACAGCAAGCACCTCCATATCCTCACCGCCATCCCCAACTGCTTCTTCCGGCGGTTGGAGCAGCCC
AACACCCAGCCCCGGGAGGAATTCGCCGTCGGCAAGAAGTTCGGGGTCGCCCGGGTGGACCGCTTCAGCTGGAAGGACCT
CCTGGATTCCCTTTCCTGCACCGAATGCGGCCGCTGCCAGAACGCCTGCCCGGCGGGCATCACCGGCAAGCCCCTCAACC
CGCGGGGGATCATCCATGAGATCAAGGTCAATCTGCTGGGAAATGGTCACCACTTAAAGAACGGATTGAAGCCGGAGCTT
CCCCTGATCGGCGAGGGGGGGGGGAGCTGTCCGGAAGGCGCCATCTGGTCCTGCACCACCTGCGGTGCCTGCATGGAGGC
CTGCCCGGTCTTCATCGAGCATGTCCCCAAGATCGTTCAGATGCGCCGCCACCTGGTGGAGGAGGATGTCCGTTTCCCCG
AAGAACTCTTGAACCTCTTCGAAAACATGGAAGGACGGAGCAACCCCTGGGGTATCGCCCCCACGGAGCGGACCAAGTGG
ACCGTCACCCTCGATGTCAAACCCTACGAGGCGGGGAAAACCGAGTACCTCTTCTACGTAGGGTGTGCCGGCTCCTTCGA
CTCCCGCAACAAGCATGTGACGGTGGCGCTGGCCCAACTCCTGGACCGGGCCGGGGTCTCCTGGGGTGTGCTGGGTAAAG
ATGAGAAATGCTGCGGCGACGGCGTGCGGCGGCTGGGGAACGAATACCTCTTCGACAAAATGGCGAAAGAGAACGTCGAG
CTGTTCAAGCAAAAAGGGATCACCAAGGTCGTTACCCAGTGCCCCCACTGCTTCTCCACCCTGAAAAACGACTACCGGCA
GTACGGCCTTGAGCTGGAGGTGATCCATCACGCCGAGCTCCTGCGGGACCTGGTAAAGGAGGGGAGGCTGAAACTTGACA
CAGCGGCGGCCCTGGGCGCCACCGTCTTCCACGATTCCTGCTATCTGGGCCGGCATAACGACGTCTACGACGCCCCGCGC
GATGTCATCCGGGCTGCTACAGGCAGCGCACCGGCCGACATGGAGCGAAACCGCAACAACGCCTTTTGCTGTGGCGCTGG
GGGTGGGCGGATGTGGATGGAAGAGCACACGGGAAAACGGATAAACCTGGAGCGGGTCGAAGAGGCGCTGCGTCAGAAAC
CGGATACCATCTGCGTCTCCTGCCCCTACTGCATGACCATGTTCGAGGATGGACTCAAGGACGTGAAAGCCGAAAACGTC
AGGGTCAGGGATGTGGCCGAGGTCTTGGCGGAAGGGTTAAGAGCTTAA

Upstream 100 bases:

>100_bases
TTCTGTCCACGATGTCGTGGCACTTAACAGCTAGGGACTAGCAAAGGCTTTTACCGGTCCCCAGTCCCTAATCCCCGGTT
ACTAACTACACGAGGTTTGC

Downstream 100 bases:

>100_bases
GGTTTTTTCGGGAGGATGCAAAAATGTCGGATATAAAGGGACTTCCACGATACAATGTTATCTCATTTAGGGTCACCGAT
GAAGAAATGAAGGCGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MTPNPTIFIPLLLVSLGIFAWGCWRRLSLVAVGTGEDRFDNPGRRMVEMLRYAFGQKRVVARPFGINHAVIFWSFLVLLI
ANGEFLLDGVFPAVALDKLPAGIYHPLMLLLDIVSLLALVAVCVAAVRRVASPPYPEARTVEAFVILGLIAILMLAYFGL
HGAEIALGNGAAARFMPVSSVVAGLLQASPLAFSLQSAAWFCWWAHAVALLLFMAYLPNSKHLHILTAIPNCFFRRLEQP
NTQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTECGRCQNACPAGITGKPLNPRGIIHEIKVNLLGNGHHLKNGLKPEL
PLIGEGGGSCPEGAIWSCTTCGACMEACPVFIEHVPKIVQMRRHLVEEDVRFPEELLNLFENMEGRSNPWGIAPTERTKW
TVTLDVKPYEAGKTEYLFYVGCAGSFDSRNKHVTVALAQLLDRAGVSWGVLGKDEKCCGDGVRRLGNEYLFDKMAKENVE
LFKQKGITKVVTQCPHCFSTLKNDYRQYGLELEVIHHAELLRDLVKEGRLKLDTAAALGATVFHDSCYLGRHNDVYDAPR
DVIRAATGSAPADMERNRNNAFCCGAGGGRMWMEEHTGKRINLERVEEALRQKPDTICVSCPYCMTMFEDGLKDVKAENV
RVRDVAEVLAEGLRA

Sequences:

>Translated_655_residues
MTPNPTIFIPLLLVSLGIFAWGCWRRLSLVAVGTGEDRFDNPGRRMVEMLRYAFGQKRVVARPFGINHAVIFWSFLVLLI
ANGEFLLDGVFPAVALDKLPAGIYHPLMLLLDIVSLLALVAVCVAAVRRVASPPYPEARTVEAFVILGLIAILMLAYFGL
HGAEIALGNGAAARFMPVSSVVAGLLQASPLAFSLQSAAWFCWWAHAVALLLFMAYLPNSKHLHILTAIPNCFFRRLEQP
NTQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTECGRCQNACPAGITGKPLNPRGIIHEIKVNLLGNGHHLKNGLKPEL
PLIGEGGGSCPEGAIWSCTTCGACMEACPVFIEHVPKIVQMRRHLVEEDVRFPEELLNLFENMEGRSNPWGIAPTERTKW
TVTLDVKPYEAGKTEYLFYVGCAGSFDSRNKHVTVALAQLLDRAGVSWGVLGKDEKCCGDGVRRLGNEYLFDKMAKENVE
LFKQKGITKVVTQCPHCFSTLKNDYRQYGLELEVIHHAELLRDLVKEGRLKLDTAAALGATVFHDSCYLGRHNDVYDAPR
DVIRAATGSAPADMERNRNNAFCCGAGGGRMWMEEHTGKRINLERVEEALRQKPDTICVSCPYCMTMFEDGLKDVKAENV
RVRDVAEVLAEGLRA
>Mature_654_residues
TPNPTIFIPLLLVSLGIFAWGCWRRLSLVAVGTGEDRFDNPGRRMVEMLRYAFGQKRVVARPFGINHAVIFWSFLVLLIA
NGEFLLDGVFPAVALDKLPAGIYHPLMLLLDIVSLLALVAVCVAAVRRVASPPYPEARTVEAFVILGLIAILMLAYFGLH
GAEIALGNGAAARFMPVSSVVAGLLQASPLAFSLQSAAWFCWWAHAVALLLFMAYLPNSKHLHILTAIPNCFFRRLEQPN
TQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTECGRCQNACPAGITGKPLNPRGIIHEIKVNLLGNGHHLKNGLKPELP
LIGEGGGSCPEGAIWSCTTCGACMEACPVFIEHVPKIVQMRRHLVEEDVRFPEELLNLFENMEGRSNPWGIAPTERTKWT
VTLDVKPYEAGKTEYLFYVGCAGSFDSRNKHVTVALAQLLDRAGVSWGVLGKDEKCCGDGVRRLGNEYLFDKMAKENVEL
FKQKGITKVVTQCPHCFSTLKNDYRQYGLELEVIHHAELLRDLVKEGRLKLDTAAALGATVFHDSCYLGRHNDVYDAPRD
VIRAATGSAPADMERNRNNAFCCGAGGGRMWMEEHTGKRINLERVEEALRQKPDTICVSCPYCMTMFEDGLKDVKAENVR
VRDVAEVLAEGLRA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 72468; Mature: 72337

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNPTIFIPLLLVSLGIFAWGCWRRLSLVAVGTGEDRFDNPGRRMVEMLRYAFGQKRVV
CCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE
ARPFGINHAVIFWSFLVLLIANGEFLLDGVFPAVALDKLPAGIYHPLMLLLDIVSLLALV
ECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AVCVAAVRRVASPPYPEARTVEAFVILGLIAILMLAYFGLHGAEIALGNGAAARFMPVSS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
VVAGLLQASPLAFSLQSAAWFCWWAHAVALLLFMAYLPNSKHLHILTAIPNCFFRRLEQP
HHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCC
NTQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTECGRCQNACPAGITGKPLNPRGIIHE
CCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEE
IKVNLLGNGHHLKNGLKPELPLIGEGGGSCPEGAIWSCTTCGACMEACPVFIEHVPKIVQ
EEEEEECCCHHHCCCCCCCCCEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH
MRRHLVEEDVRFPEELLNLFENMEGRSNPWGIAPTERTKWTVTLDVKPYEAGKTEYLFYV
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEE
GCAGSFDSRNKHVTVALAQLLDRAGVSWGVLGKDEKCCGDGVRRLGNEYLFDKMAKENVE
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFKQKGITKVVTQCPHCFSTLKNDYRQYGLELEVIHHAELLRDLVKEGRLKLDTAAALGA
HHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCEEEEHHHHHHH
TVFHDSCYLGRHNDVYDAPRDVIRAATGSAPADMERNRNNAFCCGAGGGRMWMEEHTGKR
HHHHCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCCCHHHHCCCCE
INLERVEEALRQKPDTICVSCPYCMTMFEDGLKDVKAENVRVRDVAEVLAEGLRA
ECHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPNPTIFIPLLLVSLGIFAWGCWRRLSLVAVGTGEDRFDNPGRRMVEMLRYAFGQKRVV
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE
ARPFGINHAVIFWSFLVLLIANGEFLLDGVFPAVALDKLPAGIYHPLMLLLDIVSLLALV
ECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AVCVAAVRRVASPPYPEARTVEAFVILGLIAILMLAYFGLHGAEIALGNGAAARFMPVSS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
VVAGLLQASPLAFSLQSAAWFCWWAHAVALLLFMAYLPNSKHLHILTAIPNCFFRRLEQP
HHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCC
NTQPREEFAVGKKFGVARVDRFSWKDLLDSLSCTECGRCQNACPAGITGKPLNPRGIIHE
CCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEE
IKVNLLGNGHHLKNGLKPELPLIGEGGGSCPEGAIWSCTTCGACMEACPVFIEHVPKIVQ
EEEEEECCCHHHCCCCCCCCCEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH
MRRHLVEEDVRFPEELLNLFENMEGRSNPWGIAPTERTKWTVTLDVKPYEAGKTEYLFYV
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEE
GCAGSFDSRNKHVTVALAQLLDRAGVSWGVLGKDEKCCGDGVRRLGNEYLFDKMAKENVE
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFKQKGITKVVTQCPHCFSTLKNDYRQYGLELEVIHHAELLRDLVKEGRLKLDTAAALGA
HHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCEEEEHHHHHHH
TVFHDSCYLGRHNDVYDAPRDVIRAATGSAPADMERNRNNAFCCGAGGGRMWMEEHTGKR
HHHHCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCCCHHHHCCCCE
INLERVEEALRQKPDTICVSCPYCMTMFEDGLKDVKAENVRVRDVAEVLAEGLRA
ECHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]