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The map label for this gene is ydgM [C]

Identifier: 78223444

GI number: 78223444

Start: 2531662

End: 2532777

Strand: Reverse

Name: ydgM [C]

Synonym: Gmet_2239

Alternate gene names: 78223444

Gene position: 2532777-2531662 (Counterclockwise)

Preceding gene: 78223446

Following gene: 78223443

Centisome position: 63.36

GC content: 49.1

Gene sequence:

>1116_bases
GTGGGTGGCGAATTGATATTAAGTGCTGTGGACGACGGAAGCGAAAGTCTTGATGACGTCTATGTGAAACTACGTAAACA
CTTGGATACGTTTGTCCTGAGTGCCCCCGAGGCGGAATCGATTCTTGGAATCCTCCGTATCCGATTCACTCCTGAAGAGG
CTGGAGCTGCCTTGATTCTGAGTCAGCAACATGTGGAAATAACAAAGCTCGCACAGCGTGGCAACTTGGATGTAAATGTA
TTGCGTCCTGTTCTTGAACGAATGGCGGATAAGGCACTAGTCTATAAAAAGAATATTACCCAGGATGGAGTGGCCAAGGA
ACTGTACTGCCTTCTACCAACGGCTGTGGGATTGTGGGAAACCTCGTTTGCCACAGGAGAAAGGAACCCGCGAACTGAGC
AGTTGGCCAGGCTTTGGCAGGAATACTACAAAAGTGGATGGGGCAAGAGCATGTTAGGGGGAGCTCCATTCACACGAGTC
ATTCCTGTGGGGAAATCGATAGATACTAGTCAGGAGATTTTCCCCTACGAGAAGGCGGCAGAGCTTATTAAGCGATATGA
TTTTGCTGTGGTGATTCATTGCCCTTGTAGGAAGTCAGCAGAGCTTAGTGGAAGCAGTTGCGGTAAAGTCACGGAGGTCT
GCTTTCATTTTGGAGATCTTGCCCGCTTTATGAGTGAGAGAGGGTACGGACGGGAAGTGGACCAAACAGAAGTCTTGGAG
ATCCTGGATCAGACAGAAAAGGCCGGATTGGTTCACGTGGTTGGCAATGCAAAAGAGATGGGTGTTTCTATGTGCAGTTG
TTGTCCCTGCTGCTGTACACAATTGCAGGCCATTGCCCACAAACCCCACGCCATGGCGAAATCTAGGTTTATTGCCGGAG
TAGAGCAAGCACGATGTATCGCTTGTGGCTTATGTGCAAAGAGGTGCCCAGTCCGGGGTGTTACGTCAATCATGGGGCCG
TTACACATAAGCGAGGAGAAATGCATAGGATGTGGACTTTGCGTAACGACTTGTCCTACCCAGGCGATTTCACTAAAAGA
ACGACAAACCTATCAGGAACCGTTTGATACCGGCAGGCAACTGTTTGCAGCATGGAGTCAAAAAGATAAAGCCTGA

Upstream 100 bases:

>100_bases
TTTTCAACAACCTGTTAAGTATTGGAGATGTAGCTGAACAATTTTTTTCCATTTTGACTGAAGGTTCCGGGCTTGAGTTG
GGTATCATGGCAGATAATGA

Downstream 100 bases:

>100_bases
TGTTGTTGGATTACCGGACGGTAGTGCTGTAAAACGGAAGAAGGTGTCGCGTGATATGAAACAAATATTGCCAGAGATCC
TTGAACTCGAACAGATTGAG

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: Pyridine Nucleotide-Disulphide Oxidoreductase; Glutamate Synthase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; 4Fe-4S Ferredoxin

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MGGELILSAVDDGSESLDDVYVKLRKHLDTFVLSAPEAESILGILRIRFTPEEAGAALILSQQHVEITKLAQRGNLDVNV
LRPVLERMADKALVYKKNITQDGVAKELYCLLPTAVGLWETSFATGERNPRTEQLARLWQEYYKSGWGKSMLGGAPFTRV
IPVGKSIDTSQEIFPYEKAAELIKRYDFAVVIHCPCRKSAELSGSSCGKVTEVCFHFGDLARFMSERGYGREVDQTEVLE
ILDQTEKAGLVHVVGNAKEMGVSMCSCCPCCCTQLQAIAHKPHAMAKSRFIAGVEQARCIACGLCAKRCPVRGVTSIMGP
LHISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFDTGRQLFAAWSQKDKA

Sequences:

>Translated_371_residues
MGGELILSAVDDGSESLDDVYVKLRKHLDTFVLSAPEAESILGILRIRFTPEEAGAALILSQQHVEITKLAQRGNLDVNV
LRPVLERMADKALVYKKNITQDGVAKELYCLLPTAVGLWETSFATGERNPRTEQLARLWQEYYKSGWGKSMLGGAPFTRV
IPVGKSIDTSQEIFPYEKAAELIKRYDFAVVIHCPCRKSAELSGSSCGKVTEVCFHFGDLARFMSERGYGREVDQTEVLE
ILDQTEKAGLVHVVGNAKEMGVSMCSCCPCCCTQLQAIAHKPHAMAKSRFIAGVEQARCIACGLCAKRCPVRGVTSIMGP
LHISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFDTGRQLFAAWSQKDKA
>Mature_370_residues
GGELILSAVDDGSESLDDVYVKLRKHLDTFVLSAPEAESILGILRIRFTPEEAGAALILSQQHVEITKLAQRGNLDVNVL
RPVLERMADKALVYKKNITQDGVAKELYCLLPTAVGLWETSFATGERNPRTEQLARLWQEYYKSGWGKSMLGGAPFTRVI
PVGKSIDTSQEIFPYEKAAELIKRYDFAVVIHCPCRKSAELSGSSCGKVTEVCFHFGDLARFMSERGYGREVDQTEVLEI
LDQTEKAGLVHVVGNAKEMGVSMCSCCPCCCTQLQAIAHKPHAMAKSRFIAGVEQARCIACGLCAKRCPVRGVTSIMGPL
HISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFDTGRQLFAAWSQKDKA

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40821; Mature: 40689

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGELILSAVDDGSESLDDVYVKLRKHLDTFVLSAPEAESILGILRIRFTPEEAGAALIL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHCCEEEEE
SQQHVEITKLAQRGNLDVNVLRPVLERMADKALVYKKNITQDGVAKELYCLLPTAVGLWE
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TSFATGERNPRTEQLARLWQEYYKSGWGKSMLGGAPFTRVIPVGKSIDTSQEIFPYEKAA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCHHHHH
ELIKRYDFAVVIHCPCRKSAELSGSSCGKVTEVCFHFGDLARFMSERGYGREVDQTEVLE
HHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ILDQTEKAGLVHVVGNAKEMGVSMCSCCPCCCTQLQAIAHKPHAMAKSRFIAGVEQARCI
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ACGLCAKRCPVRGVTSIMGPLHISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFDTGRQ
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LFAAWSQKDKA
HHHHHHHCCCC
>Mature Secondary Structure 
GGELILSAVDDGSESLDDVYVKLRKHLDTFVLSAPEAESILGILRIRFTPEEAGAALIL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHCCEEEEE
SQQHVEITKLAQRGNLDVNVLRPVLERMADKALVYKKNITQDGVAKELYCLLPTAVGLWE
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TSFATGERNPRTEQLARLWQEYYKSGWGKSMLGGAPFTRVIPVGKSIDTSQEIFPYEKAA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCHHHHH
ELIKRYDFAVVIHCPCRKSAELSGSSCGKVTEVCFHFGDLARFMSERGYGREVDQTEVLE
HHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ILDQTEKAGLVHVVGNAKEMGVSMCSCCPCCCTQLQAIAHKPHAMAKSRFIAGVEQARCI
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ACGLCAKRCPVRGVTSIMGPLHISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFDTGRQ
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LFAAWSQKDKA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA