| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is fabG [H]
Identifier: 78223441
GI number: 78223441
Start: 2529320
End: 2530120
Strand: Reverse
Name: fabG [H]
Synonym: Gmet_2236
Alternate gene names: 78223441
Gene position: 2530120-2529320 (Counterclockwise)
Preceding gene: 78223442
Following gene: 78223440
Centisome position: 63.29
GC content: 51.06
Gene sequence:
>801_bases ATGTTAAAAATTGAAGACAAACCGGTTTCCGGTCTTCTTGATCTTTCAGGCAAAAGGGCGGTTGTTACTGGCGCGGCAGC TGGAATTGGCTATGCGATTGCCAAACGGCTGGCGGAGGCGGGAGCCACTGTTCTGATTACTGATATCAATCGAGAAGCGA TTGAAGAGGCGGAACATAGATTGAGCAGCATGAAGTGTAAAGTTAAAAGTCTGGTGTCAGATGCCGGCCGGGAAGCCGAT ATAAAATCTTTGTTCTCGTACGTTGCTGATAGCTTTGGCGGTGTTGATATCTTGGTGAACAATGCCGGAATTTATCCTGC CACCAAAATTTTGGATATGTCGCTAGAGCAGTGGCGGGAGGTAATCAGGATCAATCTTGAAAGTGCCTTCCTCTGTTCTC AGGAAGCTGGTCGTATCATGGTCCGGCAGGGGACGGGAGGAGTGATTGTCAACATATCTTCCATGGCAGCACTAAAACCA TGCTTTCCGGGTCTGGCCCATTATGGAGCCTCAAAAGGAGGGGTTGTAAATCTTACGCGAAGCACGGCCCTGGAACTGGC GCCACACAAGATACGCGCTGTAGCCGTTGTTCCGGGGGGGATCCTGACGGGAGGGGTCCGTTCCAATCTGAAACAGAGCG AGGAAAAGGATTCACTGCAATCCATTGGTGCCACCATTCCCCTCGGCGGGTTTGGCCAACCAGACGACATAGCCAGAACA GTGCTTTTTCTCGCATCGGATTCAGCAGCGTACATCACTGGCACAACCATACTTGTTGACGGCGGTGCGATGCTGGTTTA A
Upstream 100 bases:
>100_bases AAATTTACCGGATTCCGGAAAATCTGCAATATATTCCACCTGACAAGACCTACCCGTAAATCTTTCCAGGAATGCTGTCC ATCAGTAAAGGGGGGGCTCC
Downstream 100 bases:
>100_bases CCCTGCTAAAGAGGCTGTTTATCTTAAAACTTTGCATAGGTGTTTAGGATATACATGGTTTAAGCTCGAAAAATTTATGG AGTGTGTCTTATGAGAGCGG
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLKIEDKPVSGLLDLSGKRAVVTGAAAGIGYAIAKRLAEAGATVLITDINREAIEEAEHRLSSMKCKVKSLVSDAGREAD IKSLFSYVADSFGGVDILVNNAGIYPATKILDMSLEQWREVIRINLESAFLCSQEAGRIMVRQGTGGVIVNISSMAALKP CFPGLAHYGASKGGVVNLTRSTALELAPHKIRAVAVVPGGILTGGVRSNLKQSEEKDSLQSIGATIPLGGFGQPDDIART VLFLASDSAAYITGTTILVDGGAMLV
Sequences:
>Translated_266_residues MLKIEDKPVSGLLDLSGKRAVVTGAAAGIGYAIAKRLAEAGATVLITDINREAIEEAEHRLSSMKCKVKSLVSDAGREAD IKSLFSYVADSFGGVDILVNNAGIYPATKILDMSLEQWREVIRINLESAFLCSQEAGRIMVRQGTGGVIVNISSMAALKP CFPGLAHYGASKGGVVNLTRSTALELAPHKIRAVAVVPGGILTGGVRSNLKQSEEKDSLQSIGATIPLGGFGQPDDIART VLFLASDSAAYITGTTILVDGGAMLV >Mature_266_residues MLKIEDKPVSGLLDLSGKRAVVTGAAAGIGYAIAKRLAEAGATVLITDINREAIEEAEHRLSSMKCKVKSLVSDAGREAD IKSLFSYVADSFGGVDILVNNAGIYPATKILDMSLEQWREVIRINLESAFLCSQEAGRIMVRQGTGGVIVNISSMAALKP CFPGLAHYGASKGGVVNLTRSTALELAPHKIRAVAVVPGGILTGGVRSNLKQSEEKDSLQSIGATIPLGGFGQPDDIART VLFLASDSAAYITGTTILVDGGAMLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=35.7429718875502, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=37.4015748031496, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=36.078431372549, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=35.361216730038, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=30.8300395256917, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=8e-24, Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=31.8897637795276, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=37.696335078534, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI31542939, Length=249, Percent_Identity=34.5381526104418, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI126723191, Length=179, Percent_Identity=34.0782122905028, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=31.2741312741313, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI224922801, Length=175, Percent_Identity=37.1428571428571, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=28.968253968254, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI209862901, Length=208, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI19923983, Length=208, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=30.6122448979592, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI10190704, Length=263, Percent_Identity=30.0380228136882, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI59889578, Length=237, Percent_Identity=29.957805907173, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI83715985, Length=185, Percent_Identity=34.5945945945946, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI142976729, Length=197, Percent_Identity=27.4111675126904, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=28.6458333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504503, Length=256, Percent_Identity=28.125, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI40807363, Length=195, Percent_Identity=29.7435897435897, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI302344755, Length=101, Percent_Identity=36.6336633663366, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=36.1111111111111, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=35.2226720647773, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=36.2204724409449, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=36, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=31.3953488372093, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=33.0708661417323, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=35.2713178294574, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI87082160, Length=262, Percent_Identity=31.2977099236641, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=33.0645161290323, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=30.7086614173228, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=31.3953488372093, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=29.9595141700405, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787820, Length=232, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=36.8, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=36.6935483870968, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI25147288, Length=255, Percent_Identity=36.8627450980392, Blast_Score=133, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=35.0746268656716, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=31.6793893129771, Blast_Score=124, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=33.2075471698113, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=33.7078651685393, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=31.4393939393939, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=33.5849056603774, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=33.5849056603774, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=32.9501915708812, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=33.7078651685393, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=33.457249070632, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=32.9545454545455, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=31.8181818181818, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=33.4586466165414, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=32.5301204819277, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=32.7067669172932, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=32.4110671936759, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=31.203007518797, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=33.4615384615385, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=32.9588014981273, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=30.859375, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17536651, Length=275, Percent_Identity=31.6363636363636, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=32.2834645669291, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=31.0880829015544, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=30.8, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=29.520295202952, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=32.8502415458937, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=32.3076923076923, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=32.3383084577114, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=31.6326530612245, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17555612, Length=256, Percent_Identity=28.515625, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508895, Length=173, Percent_Identity=32.3699421965318, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI86565303, Length=214, Percent_Identity=28.5046728971963, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193207185, Length=151, Percent_Identity=34.4370860927152, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=28.4090909090909, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=25.78125, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322067, Length=200, Percent_Identity=28, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=252, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=35.7429718875502, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=35.3174603174603, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.8645418326693, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=35.2226720647773, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=34.8178137651822, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=35.15625, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24644337, Length=261, Percent_Identity=32.9501915708812, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=31.3253012048193, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI24665243, Length=193, Percent_Identity=32.6424870466321, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI221331218, Length=193, Percent_Identity=32.6424870466321, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI221331216, Length=194, Percent_Identity=32.4742268041237, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24665247, Length=194, Percent_Identity=32.4742268041237, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24641232, Length=233, Percent_Identity=30.4721030042918, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17737361, Length=191, Percent_Identity=33.5078534031414, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=30.4597701149425, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI18859837, Length=223, Percent_Identity=31.390134529148, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=29.4416243654822, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571387, Length=235, Percent_Identity=25.9574468085106, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24584744, Length=200, Percent_Identity=32.5, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574402, Length=200, Percent_Identity=32.5, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281364494, Length=198, Percent_Identity=29.2929292929293, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007238, Length=205, Percent_Identity=29.2682926829268, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24663911, Length=198, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24649181, Length=203, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584748, Length=194, Percent_Identity=29.3814432989691, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI161076933, Length=194, Percent_Identity=29.3814432989691, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007234, Length=248, Percent_Identity=28.6290322580645, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI281364892, Length=199, Percent_Identity=31.1557788944724, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007232, Length=189, Percent_Identity=31.2169312169312, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640492, Length=147, Percent_Identity=29.2517006802721, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27769; Mature: 27769
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIEDKPVSGLLDLSGKRAVVTGAAAGIGYAIAKRLAEAGATVLITDINREAIEEAEHR CCEECCCCCCCCEECCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH LSSMKCKVKSLVSDAGREADIKSLFSYVADSFGGVDILVNNAGIYPATKILDMSLEQWRE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH VIRINLESAFLCSQEAGRIMVRQGTGGVIVNISSMAALKPCFPGLAHYGASKGGVVNLTR HHHHCCHHHEEECCCCCEEEEEECCCCEEEEEHHHHHHHHCCHHHHHCCCCCCCEEEEEH STALELAPHKIRAVAVVPGGILTGGVRSNLKQSEEKDSLQSIGATIPLGGFGQPDDIART HHHHHCCCCEEEEEEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLFLASDSAAYITGTTILVDGGAMLV HHEEECCCCEEEEEEEEEEECCEEEC >Mature Secondary Structure MLKIEDKPVSGLLDLSGKRAVVTGAAAGIGYAIAKRLAEAGATVLITDINREAIEEAEHR CCEECCCCCCCCEECCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH LSSMKCKVKSLVSDAGREADIKSLFSYVADSFGGVDILVNNAGIYPATKILDMSLEQWRE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH VIRINLESAFLCSQEAGRIMVRQGTGGVIVNISSMAALKPCFPGLAHYGASKGGVVNLTR HHHHCCHHHEEECCCCCEEEEEECCCCEEEEEHHHHHHHHCCHHHHHCCCCCCCEEEEEH STALELAPHKIRAVAVVPGGILTGGVRSNLKQSEEKDSLQSIGATIPLGGFGQPDDIART HHHHHCCCCEEEEEEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLFLASDSAAYITGTTILVDGGAMLV HHEEECCCCEEEEEEEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]