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The map label for this gene is 78223385

Identifier: 78223385

GI number: 78223385

Start: 2461256

End: 2463907

Strand: Reverse

Name: 78223385

Synonym: Gmet_2178

Alternate gene names: NA

Gene position: 2463907-2461256 (Counterclockwise)

Preceding gene: 78223386

Following gene: 78223384

Centisome position: 61.64

GC content: 48.0

Gene sequence:

>2652_bases
ATGACAAAAACTCTTGCGACTTTACTTGCCAGTACGTTGTTAACCCTAATTAGCGTTACACTTGTGACTTCGATTGCATC
TGCAATCATGATTCCCAAAATCGTTGACTATGACGGTGATGGTAAGACCGATGTAGCCATGTTTCGTCCATCAGAGGGCA
AATGGTACATTTTGTACAGTTCAAATAACACACAGCATGTTGTGAATTACGGAATCAGTGGTGATATTCCAGTTTTTGGC
GATTTTGACGGCGACGGCAAAACCGACGAAGCTGTATACCGGCCATCAGAAGGAAGGTGGTACATCTTGAGGAGTTCTAA
TGGCTCTCAAAATGTTATTAACTATGGAATTAGTGGCGATATCGCAGTTCCCGGCGACTATGACGGAGATGGTAAGACCG
ATGTAGCCATGTTTCGTCCATCAGAGGGCAACTGGTACCTTTTATACAGTTCAAATAACACACAGCATGTTGTGAATTAC
GGAATTAGCGGTGATATTCCTGTTTTTGGCGATTTTGACGGCGACGGCAAAACCGACGAAGCTGTATACCGGCCATCAGA
AGGCAAGTGGTACATCTTGAGCAGCTCTAACGGCTCTCAAAATGTCATTAGCTATGGAATTAGTGGCGATATCGCAGTAC
CCGGCGACTATGACGGTGATGGTAAGACTGATGTAGCCATGTTCCGTCCATCAGAGGGCAACTGGTATATTTTGTACAGT
TCAAATAACACACAGCATGTTGTGAATTACGGAATCGGTAGCGACATTCCGGCTCCCGGCGACTACGACGGCGACGGCAA
GACTGACGAAGCTGTATACCGGCCGTCGGCAGGGAAATGGTACATCCTAAACAGCTCCAATGGCTCGCCACAAGTTGTAT
CGTACGGCTTACCGACGGACATGCCTTTAGTGAATCTGTTTCAACATTTTTCATCCGGTTATTCTGTGGTACGGCAAATA
ACAATTAATGGAGGGCTCTCCGGCATAGCCGCGGGGGCTGTTGCATCACTCACGATTGACTCTAGGGCACTAATCTCTGA
GGGGCTGTTGCGGTCCGACCGTAACGACTTGCGACTTTTCTATGACAACCAGGAGATAGATAGAGCTCTGGCTGATACCG
GGACCATTCATTTCAAGGTACAGGTAGCGATTGCGGCAAATGGCGCAGACAGTGGGTATTGTCTCTACTATGGCAATCCG
AACGAATCTGTCTCTCCAAAGTCGAACAGAGAGAACATTTATCCTTTCTATGTTGACGGCAGTTCAACGGCCGCATTCGT
TGTTACCGGTCCGACTCCGACCATCATGGCGATGCCGAAGCCAGAATTCCTGAAGTTCAGAAACAACCCTTTGTTGAGCC
GTACCCCAGGTTATTACGACTGGAAAAATGTGCGTGATATCAATTCACTCCTATACGAAGATGGATGGTATTACGCCTAT
TACGATTGTGACGATGAGGGAACTCTTGACGGGTTCCAAGGATGGGGTGTCTGTCAGGCAAAAAGCCAAGATTTGTCCAA
CTGGTTAAAGCTGGGACCGATCTTGCAGCCTAGCCTAGAGGAGGATTCGGGATCAGCTAGTGGCGCATATGTAACGAAAA
TTGGTTCAACATTTTATATGTACTACCTGGGTACTCCCAACATTGTCTTGGGTGTACCTCTTACTCCGTATAATGGAATG
TTAGCAACTGCTTCTGCGATAACAGGACCGTATACCAAGAAAGGAGTGGTTCTACCTCTGAGGAAAGGGGAATTTGACCA
AGACGAGGCATTGATCAATACCGTTTGGTACGACGGCACCAAGTATAATTGTCTGTACTCAGCCGCGGCCTTGGGATATG
CAAACGCTCTTGACCCGTCTGGCCCCTGGGATCATAGGACTAGCGTTATTGATGGGCGAGAAGGTATTGAGAATCCCGTG
CTGATTCATGACGCGTTGTCTGGGTATTATTACTTGTTTGCAAACCATGTGCAGCAACCGAATTCAGAGCCAGCATATAC
AGATTCTATTGTCATGTACTGGTCTAACGACCCGAAATCTTGGGACGTATCAAATAAGACTACGGTCGTTTCTCCGGGGT
ACGGTGCCTGGGATGGCTACATAATCGGGTTGCTTTCGAGTCTGGTCGTGAGAAATGGGGTTGTATACGGAGCTTATGAC
GGTAGGCAGCGGCCACCTTCCGGTGAACCTGTCTGGGGGCATGAATTTCGTGATGGGGGGTTCGTGGAGGCAAAATGGCC
ATTTTCATGGGGTAGCCGGATGAAAGTGGCGAGCGGTACGTCGCTACGATCAGGCCAAAAGTTTGGCGATGGTACACTAC
GGATCACTGCGCAGATGACCGGAGGCAACACCCCTAAGGTAGGACTCTCCGATGGGACCACTCACTTGTTTTTCCAAGTG
GACAGCAGCAACATATTTACAGTGAACAACAACGGTACCATGATTGCCGGAGGATTCCAACGTGTGAAGGAACTGACAAA
AACTTTCGAAATTCGCCGGTCGGGAACTAATGTGAGCTATATTTTTGATGGGGTGTTGGTTGCAAGCACAACTGGCCCAA
CGGGAGATCTGCCAATCTCTATTGCGGGAGATGTATTTTTGGAATCTATCACCTTTGAACCTGCCGCGCTCGTAACAGCT
GTTATCAGATAA

Upstream 100 bases:

>100_bases
CTATGACTTAATCCAAGCAGTATTATATAGCAACCACAAGATTGCACTACTAACACTGAACTTTCACTTATTATTCTAAA
GGTACGTTAGGAGGTTCGAG

Downstream 100 bases:

>100_bases
GCCATGTGGCTAAGGCTCTCGGACAACAAAACGTGTCTCTTGATGAGGTCGCCGAACCTGGTTGGTGGACAACAGAGCAA
GTATCTCCGACGGACCGGTG

Product: Integrins alpha chain

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Cytoplasmic Membrane Protein; FG-GAP Repeat-Containing Protein; Peptidase; CHAP Domain-Containing Protein; FG-GAP Repeat Protein; Metallophosphoesterase; Excalibur Domain-Containing Protein; Cell Surface Protein; Endonuclease/Exonuclease/Phosphatase; Cna B Domain Protein

Number of amino acids: Translated: 883; Mature: 882

Protein sequence:

>883_residues
MTKTLATLLASTLLTLISVTLVTSIASAIMIPKIVDYDGDGKTDVAMFRPSEGKWYILYSSNNTQHVVNYGISGDIPVFG
DFDGDGKTDEAVYRPSEGRWYILRSSNGSQNVINYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYLLYSSNNTQHVVNY
GISGDIPVFGDFDGDGKTDEAVYRPSEGKWYILSSSNGSQNVISYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYILYS
SNNTQHVVNYGIGSDIPAPGDYDGDGKTDEAVYRPSAGKWYILNSSNGSPQVVSYGLPTDMPLVNLFQHFSSGYSVVRQI
TINGGLSGIAAGAVASLTIDSRALISEGLLRSDRNDLRLFYDNQEIDRALADTGTIHFKVQVAIAANGADSGYCLYYGNP
NESVSPKSNRENIYPFYVDGSSTAAFVVTGPTPTIMAMPKPEFLKFRNNPLLSRTPGYYDWKNVRDINSLLYEDGWYYAY
YDCDDEGTLDGFQGWGVCQAKSQDLSNWLKLGPILQPSLEEDSGSASGAYVTKIGSTFYMYYLGTPNIVLGVPLTPYNGM
LATASAITGPYTKKGVVLPLRKGEFDQDEALINTVWYDGTKYNCLYSAAALGYANALDPSGPWDHRTSVIDGREGIENPV
LIHDALSGYYYLFANHVQQPNSEPAYTDSIVMYWSNDPKSWDVSNKTTVVSPGYGAWDGYIIGLLSSLVVRNGVVYGAYD
GRQRPPSGEPVWGHEFRDGGFVEAKWPFSWGSRMKVASGTSLRSGQKFGDGTLRITAQMTGGNTPKVGLSDGTTHLFFQV
DSSNIFTVNNNGTMIAGGFQRVKELTKTFEIRRSGTNVSYIFDGVLVASTTGPTGDLPISIAGDVFLESITFEPAALVTA
VIR

Sequences:

>Translated_883_residues
MTKTLATLLASTLLTLISVTLVTSIASAIMIPKIVDYDGDGKTDVAMFRPSEGKWYILYSSNNTQHVVNYGISGDIPVFG
DFDGDGKTDEAVYRPSEGRWYILRSSNGSQNVINYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYLLYSSNNTQHVVNY
GISGDIPVFGDFDGDGKTDEAVYRPSEGKWYILSSSNGSQNVISYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYILYS
SNNTQHVVNYGIGSDIPAPGDYDGDGKTDEAVYRPSAGKWYILNSSNGSPQVVSYGLPTDMPLVNLFQHFSSGYSVVRQI
TINGGLSGIAAGAVASLTIDSRALISEGLLRSDRNDLRLFYDNQEIDRALADTGTIHFKVQVAIAANGADSGYCLYYGNP
NESVSPKSNRENIYPFYVDGSSTAAFVVTGPTPTIMAMPKPEFLKFRNNPLLSRTPGYYDWKNVRDINSLLYEDGWYYAY
YDCDDEGTLDGFQGWGVCQAKSQDLSNWLKLGPILQPSLEEDSGSASGAYVTKIGSTFYMYYLGTPNIVLGVPLTPYNGM
LATASAITGPYTKKGVVLPLRKGEFDQDEALINTVWYDGTKYNCLYSAAALGYANALDPSGPWDHRTSVIDGREGIENPV
LIHDALSGYYYLFANHVQQPNSEPAYTDSIVMYWSNDPKSWDVSNKTTVVSPGYGAWDGYIIGLLSSLVVRNGVVYGAYD
GRQRPPSGEPVWGHEFRDGGFVEAKWPFSWGSRMKVASGTSLRSGQKFGDGTLRITAQMTGGNTPKVGLSDGTTHLFFQV
DSSNIFTVNNNGTMIAGGFQRVKELTKTFEIRRSGTNVSYIFDGVLVASTTGPTGDLPISIAGDVFLESITFEPAALVTA
VIR
>Mature_882_residues
TKTLATLLASTLLTLISVTLVTSIASAIMIPKIVDYDGDGKTDVAMFRPSEGKWYILYSSNNTQHVVNYGISGDIPVFGD
FDGDGKTDEAVYRPSEGRWYILRSSNGSQNVINYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYLLYSSNNTQHVVNYG
ISGDIPVFGDFDGDGKTDEAVYRPSEGKWYILSSSNGSQNVISYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYILYSS
NNTQHVVNYGIGSDIPAPGDYDGDGKTDEAVYRPSAGKWYILNSSNGSPQVVSYGLPTDMPLVNLFQHFSSGYSVVRQIT
INGGLSGIAAGAVASLTIDSRALISEGLLRSDRNDLRLFYDNQEIDRALADTGTIHFKVQVAIAANGADSGYCLYYGNPN
ESVSPKSNRENIYPFYVDGSSTAAFVVTGPTPTIMAMPKPEFLKFRNNPLLSRTPGYYDWKNVRDINSLLYEDGWYYAYY
DCDDEGTLDGFQGWGVCQAKSQDLSNWLKLGPILQPSLEEDSGSASGAYVTKIGSTFYMYYLGTPNIVLGVPLTPYNGML
ATASAITGPYTKKGVVLPLRKGEFDQDEALINTVWYDGTKYNCLYSAAALGYANALDPSGPWDHRTSVIDGREGIENPVL
IHDALSGYYYLFANHVQQPNSEPAYTDSIVMYWSNDPKSWDVSNKTTVVSPGYGAWDGYIIGLLSSLVVRNGVVYGAYDG
RQRPPSGEPVWGHEFRDGGFVEAKWPFSWGSRMKVASGTSLRSGQKFGDGTLRITAQMTGGNTPKVGLSDGTTHLFFQVD
SSNIFTVNNNGTMIAGGFQRVKELTKTFEIRRSGTNVSYIFDGVLVASTTGPTGDLPISIAGDVFLESITFEPAALVTAV
IR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95982; Mature: 95851

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTLATLLASTLLTLISVTLVTSIASAIMIPKIVDYDGDGKTDVAMFRPSEGKWYILYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEEEEC
SNNTQHVVNYGISGDIPVFGDFDGDGKTDEAVYRPSEGRWYILRSSNGSQNVINYGISGD
CCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEECCCCC
IAVPGDYDGDGKTDVAMFRPSEGNWYLLYSSNNTQHVVNYGISGDIPVFGDFDGDGKTDE
EECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCC
AVYRPSEGKWYILSSSNGSQNVISYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYILYS
CEEECCCCCEEEEECCCCCCCEEEECCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEE
SNNTQHVVNYGIGSDIPAPGDYDGDGKTDEAVYRPSAGKWYILNSSNGSPQVVSYGLPTD
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCC
MPLVNLFQHFSSGYSVVRQITINGGLSGIAAGAVASLTIDSRALISEGLLRSDRNDLRLF
CHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCEEEEEEECCHHHHHHHHHHCCCCCEEEE
YDNQEIDRALADTGTIHFKVQVAIAANGADSGYCLYYGNPNESVSPKSNRENIYPFYVDG
ECCHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEC
SSTAAFVVTGPTPTIMAMPKPEFLKFRNNPLLSRTPGYYDWKNVRDINSLLYEDGWYYAY
CCCEEEEEECCCCEEEECCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
YDCDDEGTLDGFQGWGVCQAKSQDLSNWLKLGPILQPSLEEDSGSASGAYVTKIGSTFYM
EEECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEE
YYLGTPNIVLGVPLTPYNGMLATASAITGPYTKKGVVLPLRKGEFDQDEALINTVWYDGT
EEECCCCEEEEECCCCCCCCEEEHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCC
KYNCLYSAAALGYANALDPSGPWDHRTSVIDGREGIENPVLIHDALSGYYYLFANHVQQP
CCEEEEHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEEEHHHCCC
NSEPAYTDSIVMYWSNDPKSWDVSNKTTVVSPGYGAWDGYIIGLLSSLVVRNGVVYGAYD
CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECC
GRQRPPSGEPVWGHEFRDGGFVEAKWPFSWGSRMKVASGTSLRSGQKFGDGTLRITAQMT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEC
GGNTPKVGLSDGTTHLFFQVDSSNIFTVNNNGTMIAGGFQRVKELTKTFEIRRSGTNVSY
CCCCCEEECCCCCEEEEEEECCCCEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE
IFDGVLVASTTGPTGDLPISIAGDVFLESITFEPAALVTAVIR
EEEEEEEEECCCCCCCCCEEEECCEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
TKTLATLLASTLLTLISVTLVTSIASAIMIPKIVDYDGDGKTDVAMFRPSEGKWYILYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEEEEC
SNNTQHVVNYGISGDIPVFGDFDGDGKTDEAVYRPSEGRWYILRSSNGSQNVINYGISGD
CCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEECCCCC
IAVPGDYDGDGKTDVAMFRPSEGNWYLLYSSNNTQHVVNYGISGDIPVFGDFDGDGKTDE
EECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCC
AVYRPSEGKWYILSSSNGSQNVISYGISGDIAVPGDYDGDGKTDVAMFRPSEGNWYILYS
CEEECCCCCEEEEECCCCCCCEEEECCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEE
SNNTQHVVNYGIGSDIPAPGDYDGDGKTDEAVYRPSAGKWYILNSSNGSPQVVSYGLPTD
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCC
MPLVNLFQHFSSGYSVVRQITINGGLSGIAAGAVASLTIDSRALISEGLLRSDRNDLRLF
CHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCEEEEEEECCHHHHHHHHHHCCCCCEEEE
YDNQEIDRALADTGTIHFKVQVAIAANGADSGYCLYYGNPNESVSPKSNRENIYPFYVDG
ECCHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEC
SSTAAFVVTGPTPTIMAMPKPEFLKFRNNPLLSRTPGYYDWKNVRDINSLLYEDGWYYAY
CCCEEEEEECCCCEEEECCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
YDCDDEGTLDGFQGWGVCQAKSQDLSNWLKLGPILQPSLEEDSGSASGAYVTKIGSTFYM
EEECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEE
YYLGTPNIVLGVPLTPYNGMLATASAITGPYTKKGVVLPLRKGEFDQDEALINTVWYDGT
EEECCCCEEEEECCCCCCCCEEEHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCC
KYNCLYSAAALGYANALDPSGPWDHRTSVIDGREGIENPVLIHDALSGYYYLFANHVQQP
CCEEEEHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEEEHHHCCC
NSEPAYTDSIVMYWSNDPKSWDVSNKTTVVSPGYGAWDGYIIGLLSSLVVRNGVVYGAYD
CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECC
GRQRPPSGEPVWGHEFRDGGFVEAKWPFSWGSRMKVASGTSLRSGQKFGDGTLRITAQMT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEC
GGNTPKVGLSDGTTHLFFQVDSSNIFTVNNNGTMIAGGFQRVKELTKTFEIRRSGTNVSY
CCCCCEEECCCCCEEEEEEECCCCEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE
IFDGVLVASTTGPTGDLPISIAGDVFLESITFEPAALVTAVIR
EEEEEEEEECCCCCCCCCEEEECCEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA