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The map label for this gene is yibD [C]

Identifier: 78223383

GI number: 78223383

Start: 2459110

End: 2460084

Strand: Reverse

Name: yibD [C]

Synonym: Gmet_2176

Alternate gene names: 78223383

Gene position: 2460084-2459110 (Counterclockwise)

Preceding gene: 78223384

Following gene: 78223382

Centisome position: 61.54

GC content: 49.64

Gene sequence:

>975_bases
GTGAGTGCCATGCTGAAACTGTCTGTCGCCATATGCACCTACAACGGTGAACGGTTCCTCCGGGAGCAGCTGGACAGCAT
CGCCCGCCAGACAAGACTGCCGGACGAGCTGATACTTTGCGACGACGGTTCTTCGGACAGGACACTGCAGATCATCGATA
ATTTTGCCTCGTCCGCTCCGTTCGAGGTGAAATCATCCCGGAATGTCAGCAACATCGGTTCAACCAAAAACTTCGAGCGT
GCCATCGGCCTTTGCGACGGAGACATAATCGCCTTATCGGATCAAGATGACGTATGGCATCGCGACAAGCTTGAAGTGAT
CGAGCGGGCATTTCTCGATGCGCCGCTGACGGGAGCGGTTTTCACAAATGGTGCGGTGGTCGGCGACGATTTGTCACCCT
TGGGGTATACCCTCTGGGATACCTTCCGCTTCAAGAAGAAGCAACAAAGCTGCTTCAAGAAGGGGAGGGCGCTGGAAGTG
CTTCTGAATCATGATGTTGTCACGGGCGCGACCATGGCCTTCCGTTCCGCCTTGCGCGACATCGTTGTCCCGATACCTGT
CGAATGGGTCCACGACGCCTGGATAGCACTCTTGACCTCAATCTATTCGAAGATTGATTTCATTGACAAGAATCTGATCG
ACTATCGCCAGCACAGTAATCAGCAGATTGGCAGTGTCAAAAAAAATTTTACCGACCATAAAAACGTTGCACAGTCAATA
ACTGATTATTATGCGCAGATCTCTAAGTACGAGATGCTGCTTGATCATATACGCTGCTTGAACCAGGTCCCCAACGATTA
TGCCATAGGAAAACTGCACGATAAGATCGAACACATGGAAGTACGTAACAGTATCTGCACGAGTCCAAAAATTATCAAGA
CCGTAGAAGCCACCTGTGAATTGCTGAACCGAAGATACCATAATTATTCCAACGGATACTTCAGCTTTTGCAAGGATATA
TTTTGGGGCGATTGA

Upstream 100 bases:

>100_bases
GGTCCGGCAGGCTGTTCATGCTGCTGATGCGGCTGGTGGAGTGGGGCCTGCTCAAAGTGTTCCCTCACAAGGGAGAGGAA
TTATCTCTCATGGGTGTCAA

Downstream 100 bases:

>100_bases
TTTCATTATGACAGTGGGCTGGCAGGCATTGCCAACGGGTTGCCAATGAACTCGCAATCGATTCACGCCATGAATCAGGA
AAGCTTTCCGGAATGCCGGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSAMLKLSVAICTYNGERFLREQLDSIARQTRLPDELILCDDGSSDRTLQIIDNFASSAPFEVKSSRNVSNIGSTKNFER
AIGLCDGDIIALSDQDDVWHRDKLEVIERAFLDAPLTGAVFTNGAVVGDDLSPLGYTLWDTFRFKKKQQSCFKKGRALEV
LLNHDVVTGATMAFRSALRDIVVPIPVEWVHDAWIALLTSIYSKIDFIDKNLIDYRQHSNQQIGSVKKNFTDHKNVAQSI
TDYYAQISKYEMLLDHIRCLNQVPNDYAIGKLHDKIEHMEVRNSICTSPKIIKTVEATCELLNRRYHNYSNGYFSFCKDI
FWGD

Sequences:

>Translated_324_residues
MSAMLKLSVAICTYNGERFLREQLDSIARQTRLPDELILCDDGSSDRTLQIIDNFASSAPFEVKSSRNVSNIGSTKNFER
AIGLCDGDIIALSDQDDVWHRDKLEVIERAFLDAPLTGAVFTNGAVVGDDLSPLGYTLWDTFRFKKKQQSCFKKGRALEV
LLNHDVVTGATMAFRSALRDIVVPIPVEWVHDAWIALLTSIYSKIDFIDKNLIDYRQHSNQQIGSVKKNFTDHKNVAQSI
TDYYAQISKYEMLLDHIRCLNQVPNDYAIGKLHDKIEHMEVRNSICTSPKIIKTVEATCELLNRRYHNYSNGYFSFCKDI
FWGD
>Mature_323_residues
SAMLKLSVAICTYNGERFLREQLDSIARQTRLPDELILCDDGSSDRTLQIIDNFASSAPFEVKSSRNVSNIGSTKNFERA
IGLCDGDIIALSDQDDVWHRDKLEVIERAFLDAPLTGAVFTNGAVVGDDLSPLGYTLWDTFRFKKKQQSCFKKGRALEVL
LNHDVVTGATMAFRSALRDIVVPIPVEWVHDAWIALLTSIYSKIDFIDKNLIDYRQHSNQQIGSVKKNFTDHKNVAQSIT
DYYAQISKYEMLLDHIRCLNQVPNDYAIGKLHDKIEHMEVRNSICTSPKIIKTVEATCELLNRRYHNYSNGYFSFCKDIF
WGD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36904; Mature: 36773

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMLKLSVAICTYNGERFLREQLDSIARQTRLPDELILCDDGSSDRTLQIIDNFASSAP
CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCC
FEVKSSRNVSNIGSTKNFERAIGLCDGDIIALSDQDDVWHRDKLEVIERAFLDAPLTGAV
CEECCCCCCHHCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCE
FTNGAVVGDDLSPLGYTLWDTFRFKKKQQSCFKKGRALEVLLNHDVVTGATMAFRSALRD
EECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH
IVVPIPVEWVHDAWIALLTSIYSKIDFIDKNLIDYRQHSNQQIGSVKKNFTDHKNVAQSI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
TDYYAQISKYEMLLDHIRCLNQVPNDYAIGKLHDKIEHMEVRNSICTSPKIIKTVEATCE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLNRRYHNYSNGYFSFCKDIFWGD
HHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SAMLKLSVAICTYNGERFLREQLDSIARQTRLPDELILCDDGSSDRTLQIIDNFASSAP
CCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCC
FEVKSSRNVSNIGSTKNFERAIGLCDGDIIALSDQDDVWHRDKLEVIERAFLDAPLTGAV
CEECCCCCCHHCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCE
FTNGAVVGDDLSPLGYTLWDTFRFKKKQQSCFKKGRALEVLLNHDVVTGATMAFRSALRD
EECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH
IVVPIPVEWVHDAWIALLTSIYSKIDFIDKNLIDYRQHSNQQIGSVKKNFTDHKNVAQSI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
TDYYAQISKYEMLLDHIRCLNQVPNDYAIGKLHDKIEHMEVRNSICTSPKIIKTVEATCE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLNRRYHNYSNGYFSFCKDIFWGD
HHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]