| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cat2 [H]
Identifier: 78223349
GI number: 78223349
Start: 2408537
End: 2410390
Strand: Reverse
Name: cat2 [H]
Synonym: Gmet_2142
Alternate gene names: 78223349
Gene position: 2410390-2408537 (Counterclockwise)
Preceding gene: 78223352
Following gene: 78223348
Centisome position: 60.3
GC content: 62.03
Gene sequence:
>1854_bases ATGAACAACCAACTTGTTGAGCTGTACAGACAGAAGCTGACAACGGCTGATGAGGCGGTGGCACGGATTCAATCCGGTTG GCGCGTGTTTGTCGGGTCGGGCTGCGCCGCGCCGTTGCAGCTGGTGGCCGCCCTGAACCGAAACGCCGGCAGGCTCCATG ACATCGAGCTGATCCAGCTACTCGCCTTCGGTTCTGCCGATTACATTACCGAGCGGAATACCGGTCATCTTCGCCACAAC TCGTTCTTCATCAGCGAGGATATCCGCCAGGCGGTCTGCGACGGGCGGGCGGACTACACGCCGATCTTCCTGAGCGAGAT CCCGGCCCTGATCCGCCGCGGCCGGAGGGGGAATCATGCGGCGCTGTTGCAGGTGTCCCCCCCTGACAGCCACGGTTACT GCAGCCTCGGGGTCAATGTGGATATCCAGCGGGCGGCGCTGGACCGGGCCCGGCTGGTGATTGCCGAGGTGAACCCCCGC ATGCCGCGCACCTGCGGCGACACCCACATTCACCTGAGCCGCTTCGATTGCCTGGTGGAAACGGACTACCCGATCCTTGA ATCCGCTGCCAAGGAACCGGATGAGGTGGAGCTGCAGATCGGCTACCACATCTCGCGGCTGGTGGAAAACGGCAGCTGCC TCCAGATGGGGATCGGCACCATTCCCAGCACGGTCCTCCGGTTCATCGCCGACAAGCGGGATCTCGGCATCCACACCGAG ATGTTCAGCGACGCCCTGATCCCCCTTATCGAGGAGGGAAACATTACCAACCGCCTGAAGAGCGTTCATCCCGGCAAGAC GGTCACCAGCTTTGTCATCGGCACCCGCGCGCTTTACGATTTCGTTGACGGCAACGTGGGGGTTGAATTCCATCCCTCGG ATTTCGTCAACGATCCCCGGGTGATCTGCGCCAACGACCGGGTGGTGGCCATCAATTCGGCCCTGCAGGTGGACCTGACC GGGCAGATCTGCGCCGACAGCATCGGCTATACCTTCTACAGCGGCATCGGCGGCCAGGTGGATTTCGCCCGCGGTGCGGC CATGAGCCGGGGAGGTAAACCGATCATCGCCATCCGCAGCACCGCAAAAGGCGGGGGGATCAGCCGCATCGTCCACCGGA TCGACGACGGCGCCGGCGTTGTCACCAGTCGCGGCGACGCCCACTACGTGGTGTCCGAGTACGGTATCGCCTATCTCCAC GGGAAAACCATCCGCGAGCGGGCCCTGGCCCTGATCTCCATTGCCCACCCCGATTACCGGCGGGAGTTGCTGGAGTTCGT CAAGCAGAAGCATTACGTCTATGAAGATGAGCAGGTATGGCAGCAGGCGCTCAATCGCTACCCGAAGGATTTTGAAGAGA GAAGGGCGTTCGGCGGGACCATGATGCTGGTCCGACCCCTCAAGGCCACCGATGAGCGTTTGCTCCAGGAGTTCTTCTAC AGCCATAATCCCGAGACCATTTACAATCGCTATTTCGGGCCGAAACTGCAACTGGCCCATCGTGAGGCGGCGAAACAGGT CTGCGTGGACTACAGCAGTCGCATGGCGCTGGCGGTGTTCCGGCAGGAGGATGATGCCGAGTCCATCGTGGCGGTGGCGC GCTATGCCGTCGACCCCCTCACCAATATGGCTGAAACGGCGGTGGTGGTCCATGAGGAGTATCGCCGCCTGGGCCTGGCT CATCACCTCCTCCGCCAGTTGGAGCGCCACGCCGCCGGCCAGGGGATCGACGGCTTCTATGCGGAGATCCTGCCGACCAA CGAGGCGATGCTTGCCTATCACCGGCGGTTGGGGCATTCTCTGACCTATTCCGACGAGACCGATACCTACCGAATGGAGT ACCGATTCAAATGA
Upstream 100 bases:
>100_bases AGAACGTGTACGGGCATCCGATTGGTTCCGGCAGCACGTCCCGAGGCGGGGTGGTCTGGTTGCGGTACTACTGAAAGGGA CGTTTTCAAACGGGGAGAGG
Downstream 100 bases:
>100_bases TGCTATCCATGACCTTTCCGTATTCTCCTCCCCACTCGGATGGCGAGCTGGTGGAGATTGGCCCTGATGTCAGATGGCTG CGCATGCCGGTGACCTACGC
Product: GCN5-related N-acetyltransferase:Acetyl-CoA hydrolase/transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MNNQLVELYRQKLTTADEAVARIQSGWRVFVGSGCAAPLQLVAALNRNAGRLHDIELIQLLAFGSADYITERNTGHLRHN SFFISEDIRQAVCDGRADYTPIFLSEIPALIRRGRRGNHAALLQVSPPDSHGYCSLGVNVDIQRAALDRARLVIAEVNPR MPRTCGDTHIHLSRFDCLVETDYPILESAAKEPDEVELQIGYHISRLVENGSCLQMGIGTIPSTVLRFIADKRDLGIHTE MFSDALIPLIEEGNITNRLKSVHPGKTVTSFVIGTRALYDFVDGNVGVEFHPSDFVNDPRVICANDRVVAINSALQVDLT GQICADSIGYTFYSGIGGQVDFARGAAMSRGGKPIIAIRSTAKGGGISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPDYRRELLEFVKQKHYVYEDEQVWQQALNRYPKDFEERRAFGGTMMLVRPLKATDERLLQEFFY SHNPETIYNRYFGPKLQLAHREAAKQVCVDYSSRMALAVFRQEDDAESIVAVARYAVDPLTNMAETAVVVHEEYRRLGLA HHLLRQLERHAAGQGIDGFYAEILPTNEAMLAYHRRLGHSLTYSDETDTYRMEYRFK
Sequences:
>Translated_617_residues MNNQLVELYRQKLTTADEAVARIQSGWRVFVGSGCAAPLQLVAALNRNAGRLHDIELIQLLAFGSADYITERNTGHLRHN SFFISEDIRQAVCDGRADYTPIFLSEIPALIRRGRRGNHAALLQVSPPDSHGYCSLGVNVDIQRAALDRARLVIAEVNPR MPRTCGDTHIHLSRFDCLVETDYPILESAAKEPDEVELQIGYHISRLVENGSCLQMGIGTIPSTVLRFIADKRDLGIHTE MFSDALIPLIEEGNITNRLKSVHPGKTVTSFVIGTRALYDFVDGNVGVEFHPSDFVNDPRVICANDRVVAINSALQVDLT GQICADSIGYTFYSGIGGQVDFARGAAMSRGGKPIIAIRSTAKGGGISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPDYRRELLEFVKQKHYVYEDEQVWQQALNRYPKDFEERRAFGGTMMLVRPLKATDERLLQEFFY SHNPETIYNRYFGPKLQLAHREAAKQVCVDYSSRMALAVFRQEDDAESIVAVARYAVDPLTNMAETAVVVHEEYRRLGLA HHLLRQLERHAAGQGIDGFYAEILPTNEAMLAYHRRLGHSLTYSDETDTYRMEYRFK >Mature_617_residues MNNQLVELYRQKLTTADEAVARIQSGWRVFVGSGCAAPLQLVAALNRNAGRLHDIELIQLLAFGSADYITERNTGHLRHN SFFISEDIRQAVCDGRADYTPIFLSEIPALIRRGRRGNHAALLQVSPPDSHGYCSLGVNVDIQRAALDRARLVIAEVNPR MPRTCGDTHIHLSRFDCLVETDYPILESAAKEPDEVELQIGYHISRLVENGSCLQMGIGTIPSTVLRFIADKRDLGIHTE MFSDALIPLIEEGNITNRLKSVHPGKTVTSFVIGTRALYDFVDGNVGVEFHPSDFVNDPRVICANDRVVAINSALQVDLT GQICADSIGYTFYSGIGGQVDFARGAAMSRGGKPIIAIRSTAKGGGISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPDYRRELLEFVKQKHYVYEDEQVWQQALNRYPKDFEERRAFGGTMMLVRPLKATDERLLQEFFY SHNPETIYNRYFGPKLQLAHREAAKQVCVDYSSRMALAVFRQEDDAESIVAVARYAVDPLTNMAETAVVVHEEYRRLGLA HHLLRQLERHAAGQGIDGFYAEILPTNEAMLAYHRRLGHSLTYSDETDTYRMEYRFK
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=169, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789287, Length=474, Percent_Identity=24.2616033755274, Blast_Score=74, Evalue=3e-14, Organism=Caenorhabditis elegans, GI32563853, Length=419, Percent_Identity=47.255369928401, Blast_Score=355, Evalue=4e-98, Organism=Caenorhabditis elegans, GI17538151, Length=425, Percent_Identity=45.4117647058823, Blast_Score=340, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6319456, Length=520, Percent_Identity=23.2692307692308, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI21358615, Length=417, Percent_Identity=46.0431654676259, Blast_Score=369, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 69151; Mature: 69151
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQLVELYRQKLTTADEAVARIQSGWRVFVGSGCAAPLQLVAALNRNAGRLHDIELIQL CCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH LAFGSADYITERNTGHLRHNSFFISEDIRQAVCDGRADYTPIFLSEIPALIRRGRRGNHA HHCCCCCCEECCCCCCEECCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCE ALLQVSPPDSHGYCSLGVNVDIQRAALDRARLVIAEVNPRMPRTCGDTHIHLSRFDCLVE EEEEECCCCCCCEEEECCCEEHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEHEEEEEE TDYPILESAAKEPDEVELQIGYHISRLVENGSCLQMGIGTIPSTVLRFIADKRDLGIHTE CCCHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHH MFSDALIPLIEEGNITNRLKSVHPGKTVTSFVIGTRALYDFVDGNVGVEFHPSDFVNDPR HHHHHHCHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCE VICANDRVVAINSALQVDLTGQICADSIGYTFYSGIGGQVDFARGAAMSRGGKPIIAIRS EEEECCCEEEECCEEEEEECCHHHHHHCCHHHHCCCCCCEEHHCCHHHCCCCCEEEEEEC TAKGGGISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLHGKTIRERALALISIAHPDYR CCCCCCHHHHHHHHCCCCCEEECCCCCEEEHHHCCEEEEECCHHHHHHHHHHEECCCHHH RELLEFVKQKHYVYEDEQVWQQALNRYPKDFEERRAFGGTMMLVRPLKATDERLLQEFFY HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHH SHNPETIYNRYFGPKLQLAHREAAKQVCVDYSSRMALAVFRQEDDAESIVAVARYAVDPL CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH TNMAETAVVVHEEYRRLGLAHHLLRQLERHAAGQGIDGFYAEILPTNEAMLAYHRRLGHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHCCC LTYSDETDTYRMEYRFK CEECCCCCCEEEEEEEC >Mature Secondary Structure MNNQLVELYRQKLTTADEAVARIQSGWRVFVGSGCAAPLQLVAALNRNAGRLHDIELIQL CCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH LAFGSADYITERNTGHLRHNSFFISEDIRQAVCDGRADYTPIFLSEIPALIRRGRRGNHA HHCCCCCCEECCCCCCEECCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCE ALLQVSPPDSHGYCSLGVNVDIQRAALDRARLVIAEVNPRMPRTCGDTHIHLSRFDCLVE EEEEECCCCCCCEEEECCCEEHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEHEEEEEE TDYPILESAAKEPDEVELQIGYHISRLVENGSCLQMGIGTIPSTVLRFIADKRDLGIHTE CCCHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHH MFSDALIPLIEEGNITNRLKSVHPGKTVTSFVIGTRALYDFVDGNVGVEFHPSDFVNDPR HHHHHHCHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCE VICANDRVVAINSALQVDLTGQICADSIGYTFYSGIGGQVDFARGAAMSRGGKPIIAIRS EEEECCCEEEECCEEEEEECCHHHHHHCCHHHHCCCCCCEEHHCCHHHCCCCCEEEEEEC TAKGGGISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLHGKTIRERALALISIAHPDYR CCCCCCHHHHHHHHCCCCCEEECCCCCEEEHHHCCEEEEECCHHHHHHHHHHEECCCHHH RELLEFVKQKHYVYEDEQVWQQALNRYPKDFEERRAFGGTMMLVRPLKATDERLLQEFFY HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHH SHNPETIYNRYFGPKLQLAHREAAKQVCVDYSSRMALAVFRQEDDAESIVAVARYAVDPL CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH TNMAETAVVVHEEYRRLGLAHHLLRQLERHAAGQGIDGFYAEILPTNEAMLAYHRRLGHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHCCC LTYSDETDTYRMEYRFK CEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]