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The map label for this gene is slyA [C]

Identifier: 78223340

GI number: 78223340

Start: 2400210

End: 2400623

Strand: Direct

Name: slyA [C]

Synonym: Gmet_2133

Alternate gene names: 78223340

Gene position: 2400210-2400623 (Clockwise)

Preceding gene: 78223339

Following gene: 78223341

Centisome position: 60.04

GC content: 58.45

Gene sequence:

>414_bases
ATGATTTCATATCGGGACCACATAGTATTCTTGATCGCCAAGGCCCATCAACGGGCCCAGGGAGCCCTTAAGGGACACCT
TCTCCCCTTTGGTCTCACCCCCATGCAGTGCCTTTTTCTGGAGGCCCTCATGGAGGAGGATGGGCTTTCGGTGGGAGAGA
TCGGCCGGCGCATAGCCCTGGATACCGCCACCCTTGCGGGAATTCTCGACCGCATGGTCACGGCCGGCTGGGTCAGGCGC
GAGACCGACTCCCAGGACGCCCGGGTGGCGCGGGTCTATCTGACGGAGAAGGCAGCGGCGGCCATTCCGGAGCTGTCAGC
AAGCATTGAACGAACAAACGATGAGCTCATGCGGAACTTTTCCCTTGAGGAAAAACTTCTGATGAAACGGTTCCTTCGGG
ATTTCCGGGAATAA

Upstream 100 bases:

>100_bases
AAAGACACGAAAAAATCTAACATAATGCTTTATTTTTCACTATTTCCCGTTGACATGACCTCCCCTTGCGGTTATCTTGT
ATGCAAGAGGATTTATTGAG

Downstream 100 bases:

>100_bases
GAATGATTTTCTTTTAACCTAACACCTTGCATACAAGATATCCGCATAGGGCAAGGACCATCATCAATGTGAGGAGATAC
ACCATGTACATGCCCGATTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Organic Hydroperoxide Resistance Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MISYRDHIVFLIAKAHQRAQGALKGHLLPFGLTPMQCLFLEALMEEDGLSVGEIGRRIALDTATLAGILDRMVTAGWVRR
ETDSQDARVARVYLTEKAAAAIPELSASIERTNDELMRNFSLEEKLLMKRFLRDFRE

Sequences:

>Translated_137_residues
MISYRDHIVFLIAKAHQRAQGALKGHLLPFGLTPMQCLFLEALMEEDGLSVGEIGRRIALDTATLAGILDRMVTAGWVRR
ETDSQDARVARVYLTEKAAAAIPELSASIERTNDELMRNFSLEEKLLMKRFLRDFRE
>Mature_137_residues
MISYRDHIVFLIAKAHQRAQGALKGHLLPFGLTPMQCLFLEALMEEDGLSVGEIGRRIALDTATLAGILDRMVTAGWVRR
ETDSQDARVARVYLTEKAAAAIPELSASIERTNDELMRNFSLEEKLLMKRFLRDFRE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15519; Mature: 15519

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYRDHIVFLIAKAHQRAQGALKGHLLPFGLTPMQCLFLEALMEEDGLSVGEIGRRIAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DTATLAGILDRMVTAGWVRRETDSQDARVARVYLTEKAAAAIPELSASIERTNDELMRNF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SLEEKLLMKRFLRDFRE
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISYRDHIVFLIAKAHQRAQGALKGHLLPFGLTPMQCLFLEALMEEDGLSVGEIGRRIAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DTATLAGILDRMVTAGWVRRETDSQDARVARVYLTEKAAAAIPELSASIERTNDELMRNF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SLEEKLLMKRFLRDFRE
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA