| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cutM [H]
Identifier: 78223341
GI number: 78223341
Start: 2400707
End: 2401576
Strand: Direct
Name: cutM [H]
Synonym: Gmet_2134
Alternate gene names: 78223341
Gene position: 2400707-2401576 (Clockwise)
Preceding gene: 78223340
Following gene: 78223342
Centisome position: 60.06
GC content: 62.64
Gene sequence:
>870_bases ATGTACATGCCCGATTTTGAGTACCATACTCCGGAGACTCTGACCGAGGCCTGCGCGCTCCTGGACGAACTGGGAGAACA GGCCACGGTCCTGGCCGGGGGAACCGATGTCCTCCACAAGATGAAGGTGGGTAAACTGGCGCCGGGGCATCTGGTATCGC TCAAAAACCTGGACGACCTTCGCACCATCAGCCACGAGCCGGGGCGCGGCATCGTCATGGGAGCCCTGACCAGCCACAAT GCCATCTACACCTCGCGTCTGCTCCAGAAACGCTACCTGTCCCTCCCCATGGCGGCCCACACCATGGCCTCCAACCAGAT CTGCAACATGGGAACCGTGGGCGGTAACATCGTCAACGGCGTCCCTTCCGCCGACCTCCCTCCGATCCTCATTGCCCTCA ACGCCTCGATACGGCTGGTTTCCAGCAAAGGGGAGCGAACCATGCCCCTGGAAGACTTCTTCCATGGCTCGGCCGAGACG GTGATCGCTCCGGGCGAGTTGCTGGCCGACATCACCATCCCGGACCAGCCGACCACCGGGAGCACCTACATGAAATTCGG CCTGCGCCGCTCCGGTGCTCTAGCGGTTGTTGGGGTAGCGGTGTCGGTTACGGTGAAAGGTGACATCCTGGAAGACGTCC GGATCGTTCTCGCTTCGGCGGCGCCAACGGTAATGCGCGCTCGGAAGGCAGAGGACCGGCTGAGGGGGAAAAAGATCAGC GACGAATTGCTGGCCGAAGCCGGGGAGGAGGCAGCGGCGGAAAGCCGTCCCCGGGACAGCATCCGGGGTTCCGCCGAATA TCGCCGGAACTTGGTCGGAGTGCTCACCAAACGGGCGCTGCGCAAAGCAATCGACGAAGGCCACTCGTAA
Upstream 100 bases:
>100_bases GGGATTTCCGGGAATAAGAATGATTTTCTTTTAACCTAACACCTTGCATACAAGATATCCGCATAGGGCAAGGACCATCA TCAATGTGAGGAGATACACC
Downstream 100 bases:
>100_bases GGAGGTAAATATATGTTGCAGTCAATAACCGACAAAGACGGAGTGAAGCGTTACCTGATCACCCTGAAGGTGAATGGGGA TGCGAAGACCGTGCTGGTAA
Product: molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein-like
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MYMPDFEYHTPETLTEACALLDELGEQATVLAGGTDVLHKMKVGKLAPGHLVSLKNLDDLRTISHEPGRGIVMGALTSHN AIYTSRLLQKRYLSLPMAAHTMASNQICNMGTVGGNIVNGVPSADLPPILIALNASIRLVSSKGERTMPLEDFFHGSAET VIAPGELLADITIPDQPTTGSTYMKFGLRRSGALAVVGVAVSVTVKGDILEDVRIVLASAAPTVMRARKAEDRLRGKKIS DELLAEAGEEAAAESRPRDSIRGSAEYRRNLVGVLTKRALRKAIDEGHS
Sequences:
>Translated_289_residues MYMPDFEYHTPETLTEACALLDELGEQATVLAGGTDVLHKMKVGKLAPGHLVSLKNLDDLRTISHEPGRGIVMGALTSHN AIYTSRLLQKRYLSLPMAAHTMASNQICNMGTVGGNIVNGVPSADLPPILIALNASIRLVSSKGERTMPLEDFFHGSAET VIAPGELLADITIPDQPTTGSTYMKFGLRRSGALAVVGVAVSVTVKGDILEDVRIVLASAAPTVMRARKAEDRLRGKKIS DELLAEAGEEAAAESRPRDSIRGSAEYRRNLVGVLTKRALRKAIDEGHS >Mature_289_residues MYMPDFEYHTPETLTEACALLDELGEQATVLAGGTDVLHKMKVGKLAPGHLVSLKNLDDLRTISHEPGRGIVMGALTSHN AIYTSRLLQKRYLSLPMAAHTMASNQICNMGTVGGNIVNGVPSADLPPILIALNASIRLVSSKGERTMPLEDFFHGSAET VIAPGELLADITIPDQPTTGSTYMKFGLRRSGALAVVGVAVSVTVKGDILEDVRIVLASAAPTVMRARKAEDRLRGKKIS DELLAEAGEEAAAESRPRDSIRGSAEYRRNLVGVLTKRALRKAIDEGHS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=282, Percent_Identity=25.886524822695, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789231, Length=285, Percent_Identity=30.1754385964912, Blast_Score=132, Evalue=3e-32, Organism=Drosophila melanogaster, GI17737937, Length=275, Percent_Identity=28.3636363636364, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 30946; Mature: 30946
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMPDFEYHTPETLTEACALLDELGEQATVLAGGTDVLHKMKVGKLAPGHLVSLKNLDDL CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCEEEECCCHHH RTISHEPGRGIVMGALTSHNAIYTSRLLQKRYLSLPMAAHTMASNQICNMGTVGGNIVNG HHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCC VPSADLPPILIALNASIRLVSSKGERTMPLEDFFHGSAETVIAPGELLADITIPDQPTTG CCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHCCCCCEEEECHHHEEEEECCCCCCCC STYMKFGLRRSGALAVVGVAVSVTVKGDILEDVRIVLASAAPTVMRARKAEDRLRGKKIS CHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH DELLAEAGEEAAAESRPRDSIRGSAEYRRNLVGVLTKRALRKAIDEGHS HHHHHHCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYMPDFEYHTPETLTEACALLDELGEQATVLAGGTDVLHKMKVGKLAPGHLVSLKNLDDL CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCEEEECCCHHH RTISHEPGRGIVMGALTSHNAIYTSRLLQKRYLSLPMAAHTMASNQICNMGTVGGNIVNG HHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCC VPSADLPPILIALNASIRLVSSKGERTMPLEDFFHGSAETVIAPGELLADITIPDQPTTG CCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHCCCCCEEEECHHHEEEEECCCCCCCC STYMKFGLRRSGALAVVGVAVSVTVKGDILEDVRIVLASAAPTVMRARKAEDRLRGKKIS CHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH DELLAEAGEEAAAESRPRDSIRGSAEYRRNLVGVLTKRALRKAIDEGHS HHHHHHCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]