Click here to switch to the map view.

The map label for this gene is 78223300

Identifier: 78223300

GI number: 78223300

Start: 2356911

End: 2358080

Strand: Reverse

Name: 78223300

Synonym: Gmet_2093

Alternate gene names: NA

Gene position: 2358080-2356911 (Counterclockwise)

Preceding gene: 78223301

Following gene: 78223295

Centisome position: 58.99

GC content: 53.25

Gene sequence:

>1170_bases
ATGCACACCGGTCCGACCGTTTTCAAACAACTTCTGCAGTTTCTGCCCCGGTACGAATTCAATCTCTGCGTTCGCCGACA
CCGTGGCGAGTATCGGGAGAAGAAGTTCTCGACCTATGACCAGTTCCTCTGCCTGGCTTATGCCCAGATGGCTGGCCGTG
AGAGCTTGCGGGATATCGAGACCTGCCTGAACTCCCACCAGGAGAAGCTGTACCACATCGGCTTTCGTGGTGATGTCTCC
CGCACGACCCTTGCCGACGCGAACGAGCGCAGGGACTGGCGTATCTTCCAAGACTTCGGTCATGTACTGATCGGCATAGC
TCAGCAGCTGTACCAGGCTGATGCCATCTCCGTTGAGCTTACGCAACCGCTCTACGCCTTTGACTCGACCACTATCGACC
TGTGCCTTACGCTGTTCCCATGGGCCGAGTTCCGCAAAACCAAGGCGGCGGTCAAGATGCATACGCTCATTGATCTGCGT
GGTCCCATTCCGACCTGGGTCACTATTACCACTGGCAAGGTCCACGATGTCAGGATGCTGGACCATCTGCCGGTTGCAAA
GGATGCCATTTACACGATGGACAGAGGGTATGTCGATTTTGCCCGGCTCCACTCCATCCACAAGCAGGGAGCATTCTTCG
TAGTTCGGGCAAAGGACAACCTGAAATGCCAGCGGTTATATTCCCATCCGAAGGACAAGGAATCAGGTGTACGGGCAGAC
CAGATTATCACCCTGGTGACGCAGAAGTCGAAAAAGGGGTATCCGGAGAAACTGCGCCGGGTCAGCTATGTTGACAAAGA
ACGGAACAAGCGACTCGTATTTCTCACGAACAACTTCGAGATTCCGGCAGCGACGGTGGCTGCGATTTACAAGCAGCGCT
GGCAGGTGGAGCTGTTTTTCAAATGGATCAAACAGCACCTGCGGATCAAGTCGTTCATCGGAACGTCAGTCAATGCCGTG
AAGAGCCAGATATGGGTTGCCTTGTGCATCTATCTGCTGGTGGCGATCACGAAAAAGAAGTTGGGGGTTCCGTGTTCGCT
CTACACTTTTCTACAGATTCTGGAGGTCAACTTGTTCGAGAAAAAGCCCATTTCATCGCTGGTTGCGGAGGCTCTCAAGC
GAAATGCTGATTATCCTGAGCGCAACCAACTGAACTTATTCAACTATTAA

Upstream 100 bases:

>100_bases
CTGTAACTTGTTGAACTTTATTGCTCTTTGGCACAATTGTTCTTTTTTCGACATGAATTCGTTCTGAGTGTAGCCTTCCT
CCCTTTACAGGAGGGGAGCA

Downstream 100 bases:

>100_bases
CCGGACAGTAGTGGATCGGCATCCAATTTTGACCCTTTTCGGCGTCTAAGGGTGACCCACCAGCATTGATAACTAATTGA
TATCAGGCTACCAAGGAAGA

Product: transposase IS4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS
RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAISVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR
GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD
QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV
KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY

Sequences:

>Translated_389_residues
MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS
RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAISVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR
GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD
QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV
KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY
>Mature_389_residues
MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS
RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAISVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR
GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD
QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV
KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 45350; Mature: 45350

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIE
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TCLNSHQEKLYHIGFRGDVSRTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAISVEL
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLRGPIPTWVTITTGKVHDVRML
CCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
DHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD
HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHH
QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFF
HHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KWIKQHLRIKSFIGTSVNAVKSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
KKPISSLVAEALKRNADYPERNQLNLFNY
CCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIE
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TCLNSHQEKLYHIGFRGDVSRTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAISVEL
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLRGPIPTWVTITTGKVHDVRML
CCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
DHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD
HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHH
QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFF
HHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KWIKQHLRIKSFIGTSVNAVKSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
KKPISSLVAEALKRNADYPERNQLNLFNY
CCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]