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The map label for this gene is fadF [H]

Identifier: 78223277

GI number: 78223277

Start: 2328262

End: 2330253

Strand: Reverse

Name: fadF [H]

Synonym: Gmet_2070

Alternate gene names: 78223277

Gene position: 2330253-2328262 (Counterclockwise)

Preceding gene: 78223278

Following gene: 78223276

Centisome position: 58.29

GC content: 61.19

Gene sequence:

>1992_bases
ATGGAAGCTACCCGCGAACTCTATTGGAATATCGGCCACGGGGCATCGGTCCTTATACCGATGTATCTCTTCACCTTCGC
TGCCCTGGGATTTCTGGTGCGAAGCGGGTTGCAGCGGCTGGATATCTACAAGCAGGGAAAGCCCCTGAACCGCTTTGACC
AGCGTGGCGTGCGCATTGTTCAGCTCCTGAAGAACGTCCTGCTGCAGAGCAGGGTGCTGAAGGTAAAGGGGCCGGGCTAT
GCACACGGGCTCTTCTTCTGGGGGTTCTTCCTCCTCTTTATCGGAACTGTTTTCGTGGCTCTCCAGGCCGACTTCACCGA
TCTCCTCTTCGGGTTCCGCTTCCTTCACGGGGACTTCTATCTCATCTTCTCGGCAGTGCTCGACATTGCCGGTCTCGTGG
CCATCGCCATGCTGGCCGGGTTCTTCGTCCGCCGCTACCTGGTGCGCCCCGATGGACTTGAAACCACCCGCGACGACGCC
ATCATGCACGGCCTCCTCTTCGCCATCCTCATCACCGGTTTTGTCATCGAAGGGGCCCGGATGGCCGTGACCGAACTCCC
TAACAACATGGCCCTGGCGGCGTGGTCGCCGGTTGGCCTCGTGGTGGCCAAGGGACTCTCCGGCATGGGTGAGGGTTCCC
TCCGGGCCCTCCACCAGGGGATGTGGTGGCTCCACTTCGCTCTCGTCATCGGCTTTATCTGCTCCATACCCTTCACCAAG
TTCCGGCATATCCTCACCACGAGCGCCAACTACTTCCTGGCCGACCTCGGTCCCAAGGGTGCCCTCGTCACCCTCAACAT
GGAGAGCGAGGACGCCGAGAGCTTCGGTGCGGCCCAGATCAAGGATATGACCTGGAAAGACATCTTCGACACCGACGCCT
GCACCAAGTGCAAGCGTTGCCAGGACCGGTGTCCGGCCCACAACACCGACAAGCCCCTCTCCCCCATGAAGGTCATCAAC
CAATTGGGAGAGGTGGCCGGCACCAATCCCGACGCGAACCTGATAGAGACCGTGAGCAAGGATGCCCTCTGGTCCTGCAC
CACCTGCCGGGCATGCCAGGAGATCTGCCCGGCCAGCATCGAGCATGTGGGTAAGATCGTGGACATGCGCCGCAACATGG
TGCTGATGGAAGGGGAGTTCCCCGGCGAAGAGGTCATGGTGGCCATGGACAACACCGAGGTAAACGGCAACCCCCTCGGT
CTGGCGTTCGCCTCCCGGGGCGACTGGGCCGAAGGGCTCCCGGTCACACGCCTCTCCGACGACGCCGAGGTGGACATCCT
CTACTTTGTCGGCTGCTATGCCTCCTTTGACAAGCGCAACATCAAAGTAGCCACCAGCTTCGTTCAGCTCTGCGCCGCTG
CCGGCGTCAAGGTCGGCATCCTCGGCAAAGAGGAGAAATGCTGCGGCGAGCCGATGCGGAAACTGGGGAACGAATACCTC
TACCAGTCCATGGCCACCGAGAACATCGAGACCATGGAGTCCTACAAGGTGAAAAAGGTCGTCACCGCCTGTCCCCACTG
CTTCAATACCCTGACCAAGGATTACCGTGATCTCGGCTTCAGCATCGAGACCGAGCACTACACCACCTTCCTGAACCGCC
TTATCCAGGAAGGGAAACTCAAGGTGAAGGGCGATGCCTTCGACTGCACCTATCACGACTCCTGCTATATCGGCCGCCAC
AACGACCTCTATGAAGAGCCTCGGGCCTTGGTGGCGGCAGCGGGGGGCACCATCCGCGAGATGGAGCGGAGCAGGGCGGA
GGGCTTCTGCTGCGGCGCCGGCGGCGGGCGGATCATGGCCGAGGAGAAACTGGGGAGCCGGATCAGCGGCAAGCGCGCAC
TGATGGCGGCGGAAACCGGCACCGGCACCCTCGTATCCAACTGTCCCTTCTGTCTCACCATGTTCGAGGACGGGATCAAG
GGAGCGGAGCTGGAAGGGAAGCTCGTTCCCCGGGATATTGCCGAGATCCTGGTGGAAAGGGTGATTGCCTGA

Upstream 100 bases:

>100_bases
GGAAGGTATGGGGGCTTTTGTGGAAAAGCGGAAACCGAACTTTACCGGGTCGTAAGATTGTTCGAGATGTGAACCTATTA
ACACTATTGGAGATTGAGCC

Downstream 100 bases:

>100_bases
GAAATGAGGCACCTGCAAAGCTACTGTTTGCAGGTGCCTCAAGAGTTGCTCCGGGGAGAATGTCATGAATTCAAACCCTG
ATGAACAGGAGCTGCTTGCC

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MEATRELYWNIGHGASVLIPMYLFTFAALGFLVRSGLQRLDIYKQGKPLNRFDQRGVRIVQLLKNVLLQSRVLKVKGPGY
AHGLFFWGFFLLFIGTVFVALQADFTDLLFGFRFLHGDFYLIFSAVLDIAGLVAIAMLAGFFVRRYLVRPDGLETTRDDA
IMHGLLFAILITGFVIEGARMAVTELPNNMALAAWSPVGLVVAKGLSGMGEGSLRALHQGMWWLHFALVIGFICSIPFTK
FRHILTTSANYFLADLGPKGALVTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRCQDRCPAHNTDKPLSPMKVIN
QLGEVAGTNPDANLIETVSKDALWSCTTCRACQEICPASIEHVGKIVDMRRNMVLMEGEFPGEEVMVAMDNTEVNGNPLG
LAFASRGDWAEGLPVTRLSDDAEVDILYFVGCYASFDKRNIKVATSFVQLCAAAGVKVGILGKEEKCCGEPMRKLGNEYL
YQSMATENIETMESYKVKKVVTACPHCFNTLTKDYRDLGFSIETEHYTTFLNRLIQEGKLKVKGDAFDCTYHDSCYIGRH
NDLYEEPRALVAAAGGTIREMERSRAEGFCCGAGGGRIMAEEKLGSRISGKRALMAAETGTGTLVSNCPFCLTMFEDGIK
GAELEGKLVPRDIAEILVERVIA

Sequences:

>Translated_663_residues
MEATRELYWNIGHGASVLIPMYLFTFAALGFLVRSGLQRLDIYKQGKPLNRFDQRGVRIVQLLKNVLLQSRVLKVKGPGY
AHGLFFWGFFLLFIGTVFVALQADFTDLLFGFRFLHGDFYLIFSAVLDIAGLVAIAMLAGFFVRRYLVRPDGLETTRDDA
IMHGLLFAILITGFVIEGARMAVTELPNNMALAAWSPVGLVVAKGLSGMGEGSLRALHQGMWWLHFALVIGFICSIPFTK
FRHILTTSANYFLADLGPKGALVTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRCQDRCPAHNTDKPLSPMKVIN
QLGEVAGTNPDANLIETVSKDALWSCTTCRACQEICPASIEHVGKIVDMRRNMVLMEGEFPGEEVMVAMDNTEVNGNPLG
LAFASRGDWAEGLPVTRLSDDAEVDILYFVGCYASFDKRNIKVATSFVQLCAAAGVKVGILGKEEKCCGEPMRKLGNEYL
YQSMATENIETMESYKVKKVVTACPHCFNTLTKDYRDLGFSIETEHYTTFLNRLIQEGKLKVKGDAFDCTYHDSCYIGRH
NDLYEEPRALVAAAGGTIREMERSRAEGFCCGAGGGRIMAEEKLGSRISGKRALMAAETGTGTLVSNCPFCLTMFEDGIK
GAELEGKLVPRDIAEILVERVIA
>Mature_663_residues
MEATRELYWNIGHGASVLIPMYLFTFAALGFLVRSGLQRLDIYKQGKPLNRFDQRGVRIVQLLKNVLLQSRVLKVKGPGY
AHGLFFWGFFLLFIGTVFVALQADFTDLLFGFRFLHGDFYLIFSAVLDIAGLVAIAMLAGFFVRRYLVRPDGLETTRDDA
IMHGLLFAILITGFVIEGARMAVTELPNNMALAAWSPVGLVVAKGLSGMGEGSLRALHQGMWWLHFALVIGFICSIPFTK
FRHILTTSANYFLADLGPKGALVTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRCQDRCPAHNTDKPLSPMKVIN
QLGEVAGTNPDANLIETVSKDALWSCTTCRACQEICPASIEHVGKIVDMRRNMVLMEGEFPGEEVMVAMDNTEVNGNPLG
LAFASRGDWAEGLPVTRLSDDAEVDILYFVGCYASFDKRNIKVATSFVQLCAAAGVKVGILGKEEKCCGEPMRKLGNEYL
YQSMATENIETMESYKVKKVVTACPHCFNTLTKDYRDLGFSIETEHYTTFLNRLIQEGKLKVKGDAFDCTYHDSCYIGRH
NDLYEEPRALVAAAGGTIREMERSRAEGFCCGAGGGRIMAEEKLGSRISGKRALMAAETGTGTLVSNCPFCLTMFEDGIK
GAELEGKLVPRDIAEILVERVIA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73184; Mature: 73184

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATRELYWNIGHGASVLIPMYLFTFAALGFLVRSGLQRLDIYKQGKPLNRFDQRGVRIV
CCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLLKNVLLQSRVLKVKGPGYAHGLFFWGFFLLFIGTVFVALQADFTDLLFGFRFLHGDFY
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHH
LIFSAVLDIAGLVAIAMLAGFFVRRYLVRPDGLETTRDDAIMHGLLFAILITGFVIEGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
MAVTELPNNMALAAWSPVGLVVAKGLSGMGEGSLRALHQGMWWLHFALVIGFICSIPFTK
HHHHHCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FRHILTTSANYFLADLGPKGALVTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRC
HHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHCCCHHHCCCCHHHHCCCHHHHHHHHH
QDRCPAHNTDKPLSPMKVINQLGEVAGTNPDANLIETVSKDALWSCTTCRACQEICPASI
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHH
EHVGKIVDMRRNMVLMEGEFPGEEVMVAMDNTEVNGNPLGLAFASRGDWAEGLPVTRLSD
HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
DAEVDILYFVGCYASFDKRNIKVATSFVQLCAAAGVKVGILGKEEKCCGEPMRKLGNEYL
CCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHH
YQSMATENIETMESYKVKKVVTACPHCFNTLTKDYRDLGFSIETEHYTTFLNRLIQEGKL
HHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCE
KVKGDAFDCTYHDSCYIGRHNDLYEEPRALVAAAGGTIREMERSRAEGFCCGAGGGRIMA
EECCCEEEEEECCCEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEE
EEKLGSRISGKRALMAAETGTGTLVSNCPFCLTMFEDGIKGAELEGKLVPRDIAEILVER
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
VIA
HCC
>Mature Secondary Structure
MEATRELYWNIGHGASVLIPMYLFTFAALGFLVRSGLQRLDIYKQGKPLNRFDQRGVRIV
CCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLLKNVLLQSRVLKVKGPGYAHGLFFWGFFLLFIGTVFVALQADFTDLLFGFRFLHGDFY
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHH
LIFSAVLDIAGLVAIAMLAGFFVRRYLVRPDGLETTRDDAIMHGLLFAILITGFVIEGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
MAVTELPNNMALAAWSPVGLVVAKGLSGMGEGSLRALHQGMWWLHFALVIGFICSIPFTK
HHHHHCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FRHILTTSANYFLADLGPKGALVTLNMESEDAESFGAAQIKDMTWKDIFDTDACTKCKRC
HHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHCCCHHHCCCCHHHHCCCHHHHHHHHH
QDRCPAHNTDKPLSPMKVINQLGEVAGTNPDANLIETVSKDALWSCTTCRACQEICPASI
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHH
EHVGKIVDMRRNMVLMEGEFPGEEVMVAMDNTEVNGNPLGLAFASRGDWAEGLPVTRLSD
HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
DAEVDILYFVGCYASFDKRNIKVATSFVQLCAAAGVKVGILGKEEKCCGEPMRKLGNEYL
CCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHH
YQSMATENIETMESYKVKKVVTACPHCFNTLTKDYRDLGFSIETEHYTTFLNRLIQEGKL
HHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCE
KVKGDAFDCTYHDSCYIGRHNDLYEEPRALVAAAGGTIREMERSRAEGFCCGAGGGRIMA
EECCCEEEEEECCCEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEE
EEKLGSRISGKRALMAAETGTGTLVSNCPFCLTMFEDGIKGAELEGKLVPRDIAEILVER
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
VIA
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]