Click here to switch to the map view.

The map label for this gene is 78223270

Identifier: 78223270

GI number: 78223270

Start: 2319728

End: 2320672

Strand: Reverse

Name: 78223270

Synonym: Gmet_2063

Alternate gene names: NA

Gene position: 2320672-2319728 (Counterclockwise)

Preceding gene: 78223271

Following gene: 78223267

Centisome position: 58.05

GC content: 62.33

Gene sequence:

>945_bases
GTGTCCGGGACACTGTTTACCTATCGGAGAAAAGTCGATTTTGGAGACTGCGACTCCGCCCGCATCTACTTCACGCCGCG
GGCTGTCGATTACGCGGTGGAGGCAGTGGAAGCCTGGTTCGGGGATGTGTTGGGCGTCTCCTGGGCGGATCTGTTCCTGA
GGCACGATCTCGATGTGACGTTCGTGCGGATGGGGTGCGAGTACTTCCGGCCGGTGATTGCCGACCAGACAGTGCATGTG
CGGGTAAGGGCGACCGCTGTCGACCGCTCGTCAGTGACTTTCAGCGCCGCCGGAGAGGACGACTCCGGCGGCGTCTTTTT
TCGGGCAACTCTCGTGGCGCAATTCAGAGCGGGGCGGAATCGCGCACCGGTTCCGATTCCGCCCCGTTACCGCGAGCGGA
TGGAGGACTGTCTGGAGCAGGCAGACGGGAAGTCGGGTACTGTCGCTCAAAGGGTTGGCGGCGAACCGTTCCTCTCCCGA
TTGCAGTCCGATGGGGTCCACTTTACCGTCCGGCGTCGCGTGGTCTATGGGGATTGCACGCTTTCCGGCACCGTTTACGC
TCCGCGACTCTTCAACTACGCCGTTGAGGCGGTGGGTGAGTGGTACCGGGAGACCCTGGGCATTTCCTGGCGGGAGCAGT
GCATCCGCCTGAGGGGAGCCCCTTTCCGGGAGGTCTGGTGCGAGCGGCTGGCCCCCCTTGTCCCCGGCCAGGTAATCACC
ATGACGGTCGGGATTCCGCGGTTGGGGAAATCGAGCATTGGTTATGAAGTCGTCGGGTATGATGACCGGGGTGAGCCCTG
TTTTCAGGTCGGGATGTCGGCCTGTTACATCTCGGAGGAAACCGGCTCCATCAAGGCGATCCCCTTTCCTGACGACATGC
GGAGTCGGATCCTCGCCTATCAGGTGCTCTGCGATCAGGGTGTCATTCCCGCCACGGCCTCTTAG

Upstream 100 bases:

>100_bases
ATCTGATCAACGGGGTGCTCATCCCCCTCGCGAAAAAAGGGGCTGAGGAAATTTCCAGCCAGCTCGGGTATTGCTGAAGC
GGGTTCATGGGGAGACGCGC

Downstream 100 bases:

>100_bases
AGTGCCTTCAGAACGACCAGCGAGACATCGTCGGTCAGGTTCTGGTTTGCGGCGAACGATCTGACCTGGGCGAGGAGATT
GTCGATAATCTGCTGGGGAT

Product: thioesterase-like

Products: NA

Alternate protein names: Thioesterase-Like

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSGTLFTYRRKVDFGDCDSARIYFTPRAVDYAVEAVEAWFGDVLGVSWADLFLRHDLDVTFVRMGCEYFRPVIADQTVHV
RVRATAVDRSSVTFSAAGEDDSGGVFFRATLVAQFRAGRNRAPVPIPPRYRERMEDCLEQADGKSGTVAQRVGGEPFLSR
LQSDGVHFTVRRRVVYGDCTLSGTVYAPRLFNYAVEAVGEWYRETLGISWREQCIRLRGAPFREVWCERLAPLVPGQVIT
MTVGIPRLGKSSIGYEVVGYDDRGEPCFQVGMSACYISEETGSIKAIPFPDDMRSRILAYQVLCDQGVIPATAS

Sequences:

>Translated_314_residues
MSGTLFTYRRKVDFGDCDSARIYFTPRAVDYAVEAVEAWFGDVLGVSWADLFLRHDLDVTFVRMGCEYFRPVIADQTVHV
RVRATAVDRSSVTFSAAGEDDSGGVFFRATLVAQFRAGRNRAPVPIPPRYRERMEDCLEQADGKSGTVAQRVGGEPFLSR
LQSDGVHFTVRRRVVYGDCTLSGTVYAPRLFNYAVEAVGEWYRETLGISWREQCIRLRGAPFREVWCERLAPLVPGQVIT
MTVGIPRLGKSSIGYEVVGYDDRGEPCFQVGMSACYISEETGSIKAIPFPDDMRSRILAYQVLCDQGVIPATAS
>Mature_313_residues
SGTLFTYRRKVDFGDCDSARIYFTPRAVDYAVEAVEAWFGDVLGVSWADLFLRHDLDVTFVRMGCEYFRPVIADQTVHVR
VRATAVDRSSVTFSAAGEDDSGGVFFRATLVAQFRAGRNRAPVPIPPRYRERMEDCLEQADGKSGTVAQRVGGEPFLSRL
QSDGVHFTVRRRVVYGDCTLSGTVYAPRLFNYAVEAVGEWYRETLGISWREQCIRLRGAPFREVWCERLAPLVPGQVITM
TVGIPRLGKSSIGYEVVGYDDRGEPCFQVGMSACYISEETGSIKAIPFPDDMRSRILAYQVLCDQGVIPATAS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35038; Mature: 34907

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTLFTYRRKVDFGDCDSARIYFTPRAVDYAVEAVEAWFGDVLGVSWADLFLRHDLDVT
CCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVRMGCEYFRPVIADQTVHVRVRATAVDRSSVTFSAAGEDDSGGVFFRATLVAQFRAGRN
HHHHCHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCCCCCCEEEHHHHHHHHHCCCC
RAPVPIPPRYRERMEDCLEQADGKSGTVAQRVGGEPFLSRLQSDGVHFTVRRRVVYGDCT
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCEEEEEEEEEEEECEE
LSGTVYAPRLFNYAVEAVGEWYRETLGISWREQCIRLRGAPFREVWCERLAPLVPGQVIT
ECCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE
MTVGIPRLGKSSIGYEVVGYDDRGEPCFQVGMSACYISEETGSIKAIPFPDDMRSRILAY
EEECCCCCCCCCCCEEEEEECCCCCHHHHHCCHHEEEECCCCCEEEECCCHHHHHHHHHH
QVLCDQGVIPATAS
HHHHCCCCCCCCCC
>Mature Secondary Structure 
SGTLFTYRRKVDFGDCDSARIYFTPRAVDYAVEAVEAWFGDVLGVSWADLFLRHDLDVT
CCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FVRMGCEYFRPVIADQTVHVRVRATAVDRSSVTFSAAGEDDSGGVFFRATLVAQFRAGRN
HHHHCHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCCCCCCEEEHHHHHHHHHCCCC
RAPVPIPPRYRERMEDCLEQADGKSGTVAQRVGGEPFLSRLQSDGVHFTVRRRVVYGDCT
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCEEEEEEEEEEEECEE
LSGTVYAPRLFNYAVEAVGEWYRETLGISWREQCIRLRGAPFREVWCERLAPLVPGQVIT
ECCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE
MTVGIPRLGKSSIGYEVVGYDDRGEPCFQVGMSACYISEETGSIKAIPFPDDMRSRILAY
EEECCCCCCCCCCCEEEEEECCCCCHHHHHCCHHEEEECCCCCEEEECCCHHHHHHHHHH
QVLCDQGVIPATAS
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA