| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yhcP [C]
Identifier: 78223267
GI number: 78223267
Start: 2314429
End: 2316336
Strand: Reverse
Name: yhcP [C]
Synonym: Gmet_2060
Alternate gene names: 78223267
Gene position: 2316336-2314429 (Counterclockwise)
Preceding gene: 78223270
Following gene: 78223266
Centisome position: 57.95
GC content: 61.84
Gene sequence:
>1908_bases ATGCATAAAGACACCGTGATTGACATGCTTACCCTTACCGTACGCAGGCAACTCGCCCTCCAGCGGCCACAACTGATGCT CGCAGTCCGCGGTACCGCTGCCGCCCTCATTTCCCTTGCGGTAGCCGTGCTGTTGCGTCTGGAATCTCCCTACTGGGCGG CAATGACGGCGATCATCGTGATCCAGCCGACACGGGGGCTTTTGCTGGAAAAGAGCTATTACCGCCTCGTCGGCACGGCC ATCGGGTCTGCGGCAGGGCTGCTGCTCATGCTGCACGTCACGTCGCCTCTGGTTCTCACCCTTGCGCTTTCCCTCTGGCT GGCAGGGTGTGTCGGCATCGGCAACCTGATATATGGCCTCCGCTCCTACGCCATTCTTCTGGCCGGCTGTACCTGTGCCA TCATTGGCGCCCGCGCCTACCAAACCCCTCTCCATCTCCATGACCTCGCATTCGGAAGAATCGCCGGGACGATTGTTGGA ATCATGGTCGCGACGACGGTCACGCTCCTTTTTACCCCACGCCAGTCGAAGGACGACTATGTGGACCGACTGCGCCGGGT TTCCGGGGAGGCCGTCGCGTGGCTGGCGCTGCTGCTGCGTCATGGGGGCGAGAGCAGCCAGGTGCGGCTGGAACAGGAAA TTCTGCTGGAGATCGCGGAGATTGAAAGCCTCATCGACGTTGTTGGGGCGGGGTCGCTGCGCTTCAAGAGGAAAAAGCGC CACATTCGGAGTCTCGTTGCCTCGCTCCTTTCCCTTCTGGCCGCCGGTCGGTCGGTTGCCCTGGGAAGCGGTCAGCATGC CTCCCGTGATGATCGGCTGAGCCAACTTGTCCTGCGCCTTGAGGAGGTTGCCGGTAACCTGAAAGGACACACAACAGCCT CCTCATGCATCGACGATCTCCAGGGGGTTGCGGCTGAGACCGCAGCCAATCTTCCCCTTCTGGGGGAGACGCTGACAGAC CTCGTGTCGGCCCTTCGACTCGTTCTGTCGGAGTTCGATACTGCGCCGGACACTCCTGATGAGGAAACCGCGACCCGGCT CATCCGCCATCGGGATTGGGAGGCGGGGCGGCGGGCTGCGTTGCGAGCCGCAGTCGCGATACTTGTCGTGGGGCTTATCT GGCAAGTTACCGGGTGGAAGCAGGGGGCAGTGATGCTCATGCCCGCATCCATCATGGTCAGTCTCTTTTCCACGCGGGAT TTTCCTGCCGACACGCTGGTTCACGTCTTTGTCGGCGCCTCGATCGGTTCCGCGGCGGCCCTTCTCTGCCGGCTGATTCT GCTGCCGGGGGTGACCAATCCCCTCGTGGAAGGAGTCGTAATCGCTCCGCTGATCCTTCTCGGCGTCTTCGCCATGCAGT ATCGACAAACGGTGGCTGCCGCCACCGACGCCACACTCATCTTCATGTTCGTCGAGCAGCCCGGCGTTCCGCTCACCAGT ACGGCTTACGACCTGCTGACCGGTGCCTTTGCCACCGTGGCCGGTATCGGGATTGCCTGGGCCTCGTTTCACTACCTGAT GCCGATCAATCCGGCAATGCGGATGCATTCCCTTCTGATTGCCATTGTGCGGGACCTTCATGTCATGGCAGAGAGTGAAT CCTCCGGCATGGCAGAGCGATTGCTGGCGCGCCTTCAGCACCGTGTCATCCGCCTGGTAGCCATGGCAAAGAGCTTCGAC GCCGACCACCTTGTGGTGGTGGAGGGGGGATTGGCGGCACTGGTCATCGGCAGGTGCATCCAGCGCCGGAAGGAATTGGA AAAGAATGGCCTCCTTTCTGCCGAGGCCCACAGGGCCTATCAGGAGACCGTGGCCCAAATGGCTTCTCTGTTGCAGCGAC CGGAAGGGAGCCTCCCGGTGCTGGAGAGCGCGGCTGCCAGACTCTGTGCGGCACTTGCCCCTCACTAG
Upstream 100 bases:
>100_bases GTGTCTTTACCTAATATCACAGAATGGTGGGTTGTCATGAACCGTCCTCAAGGGATTAAAAAAGATAGCAATATAATAGA ATGCATGCTAACTATATTTT
Downstream 100 bases:
>100_bases TGCACCTCAACCACCATAGCAGTAATATCAACACGCTATTCCCCGTGCAGCAGTGTCTCCTGGAGACAAACGCGCCTGCT TTGAATAATTGATAGTCCCC
Product: fusaric acid resistance protein region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MHKDTVIDMLTLTVRRQLALQRPQLMLAVRGTAAALISLAVAVLLRLESPYWAAMTAIIVIQPTRGLLLEKSYYRLVGTA IGSAAGLLLMLHVTSPLVLTLALSLWLAGCVGIGNLIYGLRSYAILLAGCTCAIIGARAYQTPLHLHDLAFGRIAGTIVG IMVATTVTLLFTPRQSKDDYVDRLRRVSGEAVAWLALLLRHGGESSQVRLEQEILLEIAEIESLIDVVGAGSLRFKRKKR HIRSLVASLLSLLAAGRSVALGSGQHASRDDRLSQLVLRLEEVAGNLKGHTTASSCIDDLQGVAAETAANLPLLGETLTD LVSALRLVLSEFDTAPDTPDEETATRLIRHRDWEAGRRAALRAAVAILVVGLIWQVTGWKQGAVMLMPASIMVSLFSTRD FPADTLVHVFVGASIGSAAALLCRLILLPGVTNPLVEGVVIAPLILLGVFAMQYRQTVAAATDATLIFMFVEQPGVPLTS TAYDLLTGAFATVAGIGIAWASFHYLMPINPAMRMHSLLIAIVRDLHVMAESESSGMAERLLARLQHRVIRLVAMAKSFD ADHLVVVEGGLAALVIGRCIQRRKELEKNGLLSAEAHRAYQETVAQMASLLQRPEGSLPVLESAAARLCAALAPH
Sequences:
>Translated_635_residues MHKDTVIDMLTLTVRRQLALQRPQLMLAVRGTAAALISLAVAVLLRLESPYWAAMTAIIVIQPTRGLLLEKSYYRLVGTA IGSAAGLLLMLHVTSPLVLTLALSLWLAGCVGIGNLIYGLRSYAILLAGCTCAIIGARAYQTPLHLHDLAFGRIAGTIVG IMVATTVTLLFTPRQSKDDYVDRLRRVSGEAVAWLALLLRHGGESSQVRLEQEILLEIAEIESLIDVVGAGSLRFKRKKR HIRSLVASLLSLLAAGRSVALGSGQHASRDDRLSQLVLRLEEVAGNLKGHTTASSCIDDLQGVAAETAANLPLLGETLTD LVSALRLVLSEFDTAPDTPDEETATRLIRHRDWEAGRRAALRAAVAILVVGLIWQVTGWKQGAVMLMPASIMVSLFSTRD FPADTLVHVFVGASIGSAAALLCRLILLPGVTNPLVEGVVIAPLILLGVFAMQYRQTVAAATDATLIFMFVEQPGVPLTS TAYDLLTGAFATVAGIGIAWASFHYLMPINPAMRMHSLLIAIVRDLHVMAESESSGMAERLLARLQHRVIRLVAMAKSFD ADHLVVVEGGLAALVIGRCIQRRKELEKNGLLSAEAHRAYQETVAQMASLLQRPEGSLPVLESAAARLCAALAPH >Mature_635_residues MHKDTVIDMLTLTVRRQLALQRPQLMLAVRGTAAALISLAVAVLLRLESPYWAAMTAIIVIQPTRGLLLEKSYYRLVGTA IGSAAGLLLMLHVTSPLVLTLALSLWLAGCVGIGNLIYGLRSYAILLAGCTCAIIGARAYQTPLHLHDLAFGRIAGTIVG IMVATTVTLLFTPRQSKDDYVDRLRRVSGEAVAWLALLLRHGGESSQVRLEQEILLEIAEIESLIDVVGAGSLRFKRKKR HIRSLVASLLSLLAAGRSVALGSGQHASRDDRLSQLVLRLEEVAGNLKGHTTASSCIDDLQGVAAETAANLPLLGETLTD LVSALRLVLSEFDTAPDTPDEETATRLIRHRDWEAGRRAALRAAVAILVVGLIWQVTGWKQGAVMLMPASIMVSLFSTRD FPADTLVHVFVGASIGSAAALLCRLILLPGVTNPLVEGVVIAPLILLGVFAMQYRQTVAAATDATLIFMFVEQPGVPLTS TAYDLLTGAFATVAGIGIAWASFHYLMPINPAMRMHSLLIAIVRDLHVMAESESSGMAERLLARLQHRVIRLVAMAKSFD ADHLVVVEGGLAALVIGRCIQRRKELEKNGLLSAEAHRAYQETVAQMASLLQRPEGSLPVLESAAARLCAALAPH
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=246, Percent_Identity=25.609756097561, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1787933, Length=535, Percent_Identity=24.8598130841122, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 68201; Mature: 68201
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKDTVIDMLTLTVRRQLALQRPQLMLAVRGTAAALISLAVAVLLRLESPYWAAMTAIIV CCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHEEEEE IQPTRGLLLEKSYYRLVGTAIGSAAGLLLMLHVTSPLVLTLALSLWLAGCVGIGNLIYGL EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSYAILLAGCTCAIIGARAYQTPLHLHDLAFGRIAGTIVGIMVATTVTLLFTPRQSKDDY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VDRLRRVSGEAVAWLALLLRHGGESSQVRLEQEILLEIAEIESLIDVVGAGSLRFKRKKR HHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HIRSLVASLLSLLAAGRSVALGSGQHASRDDRLSQLVLRLEEVAGNLKGHTTASSCIDDL HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QGVAAETAANLPLLGETLTDLVSALRLVLSEFDTAPDTPDEETATRLIRHRDWEAGRRAA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH LRAAVAILVVGLIWQVTGWKQGAVMLMPASIMVSLFSTRDFPADTLVHVFVGASIGSAAA HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH LLCRLILLPGVTNPLVEGVVIAPLILLGVFAMQYRQTVAAATDATLIFMFVEQPGVPLTS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH TAYDLLTGAFATVAGIGIAWASFHYLMPINPAMRMHSLLIAIVRDLHVMAESESSGMAER HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LLARLQHRVIRLVAMAKSFDADHLVVVEGGLAALVIGRCIQRRKELEKNGLLSAEAHRAY HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QETVAQMASLLQRPEGSLPVLESAAARLCAALAPH HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHKDTVIDMLTLTVRRQLALQRPQLMLAVRGTAAALISLAVAVLLRLESPYWAAMTAIIV CCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHEEEEE IQPTRGLLLEKSYYRLVGTAIGSAAGLLLMLHVTSPLVLTLALSLWLAGCVGIGNLIYGL EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSYAILLAGCTCAIIGARAYQTPLHLHDLAFGRIAGTIVGIMVATTVTLLFTPRQSKDDY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VDRLRRVSGEAVAWLALLLRHGGESSQVRLEQEILLEIAEIESLIDVVGAGSLRFKRKKR HHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HIRSLVASLLSLLAAGRSVALGSGQHASRDDRLSQLVLRLEEVAGNLKGHTTASSCIDDL HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QGVAAETAANLPLLGETLTDLVSALRLVLSEFDTAPDTPDEETATRLIRHRDWEAGRRAA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH LRAAVAILVVGLIWQVTGWKQGAVMLMPASIMVSLFSTRDFPADTLVHVFVGASIGSAAA HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH LLCRLILLPGVTNPLVEGVVIAPLILLGVFAMQYRQTVAAATDATLIFMFVEQPGVPLTS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH TAYDLLTGAFATVAGIGIAWASFHYLMPINPAMRMHSLLIAIVRDLHVMAESESSGMAER HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LLARLQHRVIRLVAMAKSFDADHLVVVEGGLAALVIGRCIQRRKELEKNGLLSAEAHRAY HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QETVAQMASLLQRPEGSLPVLESAAARLCAALAPH HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]