| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223245
Identifier: 78223245
GI number: 78223245
Start: 2281732
End: 2282433
Strand: Reverse
Name: 78223245
Synonym: Gmet_2038
Alternate gene names: NA
Gene position: 2282433-2281732 (Counterclockwise)
Preceding gene: 78223247
Following gene: 78223242
Centisome position: 57.1
GC content: 43.73
Gene sequence:
>702_bases ATGATTCCATTTACCTTCGAATGTGTTGACAAAACTTCCAACAAATATGATGAAACGATGGAAGAGGTTTATAGATTGCG CTTCAAAGTGTATTGCGAAGAATGGAGATTCGAGGATCCCAAGGATTATCCTGACGGCATGGAGCGCAATGAATATGACG ACTTTTCAGAACACTTCATCATCAGGTGCACTGAAGATGAGTCCATCGTGGGTACCGCTCGCATTATCCTTCCCAATGCA CTGGGCTATCCCATGATTCAGCACTGTGAAATTGTTTCTGAAATGCATGAGCACGCGTTACGGGGTGTTGAAAATGTGAA GATTGGCGAGGTTTCGCGCCTAGCTATCAGCAAAGAGTATCGAAAGAGGATTGAAGACGACGCTCTCGTAGGATATGACG CAACGTTGCCATCTGGAGCAGGTGTCGTTCACGATCTGCGGAAGTGCAATTATGTACATGAGTTTTATAAATTTCTTTTG TTGAGCAGTGTGAATATGGGGTTATCTCATTGGTATGTTGCGATGAAGAGGGGATTATACATACTTTTGAAGCGGGTTGG AATGATTTATCATCCGGTTGGTCCAGAGGTCGATTATCATGGGCTCAGGACACCGTATCTTGGTAATTTGCAGGAACTAA GGCTGGGAATGGAGAGAAAAGACCCTGATTGCTTTAAATTCATTGAAAGCAACATGCTGTGA
Upstream 100 bases:
>100_bases GCACTATACCACACCGCAATTTTATTTGACACAACTAACCGCACAAGATTGTCCGGATCGAGTTCCATCAGCGGCATGTT TAGCGCGTCAGGTGACATTT
Downstream 100 bases:
>100_bases TAAATCCGGTTATGCCATGATGTTGATGTTCTCGAATAAAAATTAGAGCCGGTTTGTGTCAGTATCGTGATATTTTATTC AGATTGGAACCAGAAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIPFTFECVDKTSNKYDETMEEVYRLRFKVYCEEWRFEDPKDYPDGMERNEYDDFSEHFIIRCTEDESIVGTARIILPNA LGYPMIQHCEIVSEMHEHALRGVENVKIGEVSRLAISKEYRKRIEDDALVGYDATLPSGAGVVHDLRKCNYVHEFYKFLL LSSVNMGLSHWYVAMKRGLYILLKRVGMIYHPVGPEVDYHGLRTPYLGNLQELRLGMERKDPDCFKFIESNML
Sequences:
>Translated_233_residues MIPFTFECVDKTSNKYDETMEEVYRLRFKVYCEEWRFEDPKDYPDGMERNEYDDFSEHFIIRCTEDESIVGTARIILPNA LGYPMIQHCEIVSEMHEHALRGVENVKIGEVSRLAISKEYRKRIEDDALVGYDATLPSGAGVVHDLRKCNYVHEFYKFLL LSSVNMGLSHWYVAMKRGLYILLKRVGMIYHPVGPEVDYHGLRTPYLGNLQELRLGMERKDPDCFKFIESNML >Mature_233_residues MIPFTFECVDKTSNKYDETMEEVYRLRFKVYCEEWRFEDPKDYPDGMERNEYDDFSEHFIIRCTEDESIVGTARIILPNA LGYPMIQHCEIVSEMHEHALRGVENVKIGEVSRLAISKEYRKRIEDDALVGYDATLPSGAGVVHDLRKCNYVHEFYKFLL LSSVNMGLSHWYVAMKRGLYILLKRVGMIYHPVGPEVDYHGLRTPYLGNLQELRLGMERKDPDCFKFIESNML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27342; Mature: 27342
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFTFECVDKTSNKYDETMEEVYRLRFKVYCEEWRFEDPKDYPDGMERNEYDDFSEHFI CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE IRCTEDESIVGTARIILPNALGYPMIQHCEIVSEMHEHALRGVENVKIGEVSRLAISKEY EEECCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH RKRIEDDALVGYDATLPSGAGVVHDLRKCNYVHEFYKFLLLSSVNMGLSHWYVAMKRGLY HHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ILLKRVGMIYHPVGPEVDYHGLRTPYLGNLQELRLGMERKDPDCFKFIESNML HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MIPFTFECVDKTSNKYDETMEEVYRLRFKVYCEEWRFEDPKDYPDGMERNEYDDFSEHFI CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE IRCTEDESIVGTARIILPNALGYPMIQHCEIVSEMHEHALRGVENVKIGEVSRLAISKEY EEECCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH RKRIEDDALVGYDATLPSGAGVVHDLRKCNYVHEFYKFLLLSSVNMGLSHWYVAMKRGLY HHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ILLKRVGMIYHPVGPEVDYHGLRTPYLGNLQELRLGMERKDPDCFKFIESNML HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA