Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is yveL [H]

Identifier: 78223235

GI number: 78223235

Start: 2269313

End: 2270164

Strand: Reverse

Name: yveL [H]

Synonym: Gmet_2028

Alternate gene names: 78223235

Gene position: 2270164-2269313 (Counterclockwise)

Preceding gene: 78223236

Following gene: 78223234

Centisome position: 56.79

GC content: 56.69

Gene sequence:

>852_bases
ATGAGCAGGATAGAGAGCATCCTTGAAAAAGCTGCGAAAATGCGGCAGGACAAGACCCCGGGGGAGAGCAGGGTTTTGGT
GGAACAGCGGGAAGTGCCCAGGGCGGTTATCGAGCCTGAGGTGTTTCAGCCCGACACCAGGATTGCAGTGGACAACCCCT
ATCTGGTTACGATCAGCGAACCCCGTTCGCCGGTCACGGAAGAGTATCGCAAACTCAAGTCGATCATCCTCAAACTGACA
AATTCGGGTCAGTTCAAGAACACCATCATGGTCACCAGCGCCGTAAGCGGCGAAGGGAAGACCATCACCTCCATCAACCT
GGCGGTGGCCCTGGCCCAGGAGTTCGACCACACGGTGCTTCTGGTCGATGCCGACCTGCGCCGTCCCGGCACCAGCAGCT
ATCTCGGCATCAGGGCCGAAGTGGGCCTGAGCGACTGTCTGTACGGCAAGGTCGATGTAAAAGACGCCCTGGTTAAAACG
GGAATAGGGAAGCTCGTGGTACTCCCCGCCGGCAGCAGGGTGGAGAACCCGGTGGAACTTCTCTCTTCCGGTCGGATGCA
AAGCTTCATTGCCGAAATAAAGAACCGCTACCCCGACCGATATATCATCATCGACACGCCGCCGCTCCTTTCCTTTGCGG
AAACCTACTCCCTGGCCAATATGGTCGACGGGGTCGTGTTCGTGGTGAAAGAGGGGGGCGCCACCATGAGCAACGTCAAG
GACGCCCTCGGTCATCTCAAGAAGGAAAAGGTCTACGGCGTTGTCTATAACAACGTCGGCATCAACCGGTTCGACGAGAA
CTACCGGTACCGCAATTACTACGCATACTACAAGGATAATGGTGCCCAATGA

Upstream 100 bases:

>100_bases
TGGGATTGACTCTGATCGAGAAGGTCCTCACCAAACTGGGGCTTGATCAGTTCATCATGAGCTGATACCGCAACGACGCA
GAGAAAGGAACATAGTACCT

Downstream 100 bases:

>100_bases
GAAAAGTGGTCATGGGTGGAATGCTTATGTCATGTTGCGTGGCAGCCACTGCCCACGCGGAGTTCAAGTTGACGCCGAGC
CTGATTATCCGCGAGGAGTA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLT
NSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKT
GIGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK
DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ

Sequences:

>Translated_283_residues
MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLT
NSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKT
GIGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK
DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ
>Mature_282_residues
SRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLTN
SGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTG
IGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVKD
ALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ

Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=232, Percent_Identity=30.6034482758621, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787216, Length=221, Percent_Identity=28.5067873303167, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 31492; Mature: 31360

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISE
CHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHCCCCCCCCCCEEEECCCEEEEECC
PRSPVTEEYRKLKSIILKLTNSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVL
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEHHHHHEEHHHCCCEEE
LVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTGIGKLVVLPAGSRVENPVEL
EEECCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHH
LSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK
HHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH
DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ
HHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
SRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISE
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHCCCCCCCCCCEEEECCCEEEEECC
PRSPVTEEYRKLKSIILKLTNSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVL
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEHHHHHEEHHHCCCEEE
LVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTGIGKLVVLPAGSRVENPVEL
EEECCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHH
LSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK
HHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH
DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ
HHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]