| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223234
Identifier: 78223234
GI number: 78223234
Start: 2267880
End: 2269286
Strand: Reverse
Name: 78223234
Synonym: Gmet_2027
Alternate gene names: NA
Gene position: 2269286-2267880 (Counterclockwise)
Preceding gene: 78223235
Following gene: 78223233
Centisome position: 56.77
GC content: 53.09
Gene sequence:
>1407_bases ATGTCATGTTGCGTGGCAGCCACTGCCCACGCGGAGTTCAAGTTGACGCCGAGCCTGATTATCCGCGAGGAGTACAACGA CAACATTGATCTGACGAACGAAAACCGTCGCGACGACTTCATCACGACTATCGTACCGTCGCTCAATGCGCTGATCGATA CCAATCTCTTGAAGCTGAACCTGGATTACGGGCTTTACTTCAAGCTCTTCGCGAAGCACTCGGAAAAGGACGATACATCC CTGGCCAGGACCCAGCGGATACGCCTCGATTCGACCTTCAACCCCATACGGGACATCCTGTTCCTCAAGATGAGCGACGT GTACGCCCGGGTACCCATCGACGACCGCCGGCAGGTGGGGGTGGGCAATGATTTCGTCAACACTACCGACTCCAACATCT TCATCGCGAATCCGTACCTTGTCTACCCCATAACCAGCAGTATCAGTCTCACTGCGGGGTATACCTACAAGAATACCTGG TACGATGACCCGCAAGGTCAGAGCGCCCAAGACCACACCGTTACGGGGAGGCTCACCAAGTCCTTCGGAGAGAGATTGTC GATTTATGGGGAATATGACTTCCGCACCCATCTGCCGAAGGAGAATATTAATATTTCTATTACGCAATTCCGCACTGTGA CAGGTGCTATAAGAGTTGGTGATACATACATAATAACAAGTTCGATACCCTCGGGTGAGTCTTTACAAGAAACCGGCTGG AACGGCTATGATACACATACCGGGACGATTGGAGCAATGCTCCAGATCACACCGAAACTGACCTTGAATGGCTCTGTCGG CAAGGTTTACTATCGATACAAGTCGGGAACACTGACGGGGCGTACTCAGTATTTCATTGGTGCCACCACGGTTGCCGAGG GCCCGCCGGTGTCTCAAGAATACCGCCTTCCTGACACCGATTCCCTCATCTGGAACGCCCAGGCGAACTACCTCCTCTCC GACCGCCTTTCCCTGGAGGCGCACTATTCCCGTGATTTTACCGATTCGGTGAATCAAGGTGCGTATAAGAGGGATACGTA CGGTGGTTCGATAAAATATAACCATACAATCGAGACCACCCTGGGTGGTTTCCACACAAAGAGCAGCTATGAGACTGTAA ATCGCGAGGATACCTCCACCGGAGCGACCATGACCGCCCGGATTCCCCTGGGAGCGAATCTGGCGGCAAACCTCCTCGGC AACTACACGCACTACAAGTTTTCCCCCGACAACGTGACACCCATCACCGAGAAGACCAACCGCTACAGTGCCCAGGCGGG CCTTGACTATACCTTCAGAATCATGACGATGGGCCTTGGCTACACGTGGAACTTCAACGACTCCAACGTGGAGGCGCACG ATTACTTCAACAACATCGTCTGGTTGCAGGCCAAACTAACCTACTGA
Upstream 100 bases:
>100_bases GCATCAACCGGTTCGACGAGAACTACCGGTACCGCAATTACTACGCATACTACAAGGATAATGGTGCCCAATGAGAAAAG TGGTCATGGGTGGAATGCTT
Downstream 100 bases:
>100_bases AAGCGCTCACCATGTACGAAGAATTTTTCGGTTTCACCACAAAGCCCTTTGAGCTGGTTCCCGATCCCGAGTTCCTCTAT CTCAGCCGGGTCCACAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSCCVAATAHAEFKLTPSLIIREEYNDNIDLTNENRRDDFITTIVPSLNALIDTNLLKLNLDYGLYFKLFAKHSEKDDTS LARTQRIRLDSTFNPIRDILFLKMSDVYARVPIDDRRQVGVGNDFVNTTDSNIFIANPYLVYPITSSISLTAGYTYKNTW YDDPQGQSAQDHTVTGRLTKSFGERLSIYGEYDFRTHLPKENINISITQFRTVTGAIRVGDTYIITSSIPSGESLQETGW NGYDTHTGTIGAMLQITPKLTLNGSVGKVYYRYKSGTLTGRTQYFIGATTVAEGPPVSQEYRLPDTDSLIWNAQANYLLS DRLSLEAHYSRDFTDSVNQGAYKRDTYGGSIKYNHTIETTLGGFHTKSSYETVNREDTSTGATMTARIPLGANLAANLLG NYTHYKFSPDNVTPITEKTNRYSAQAGLDYTFRIMTMGLGYTWNFNDSNVEAHDYFNNIVWLQAKLTY
Sequences:
>Translated_468_residues MSCCVAATAHAEFKLTPSLIIREEYNDNIDLTNENRRDDFITTIVPSLNALIDTNLLKLNLDYGLYFKLFAKHSEKDDTS LARTQRIRLDSTFNPIRDILFLKMSDVYARVPIDDRRQVGVGNDFVNTTDSNIFIANPYLVYPITSSISLTAGYTYKNTW YDDPQGQSAQDHTVTGRLTKSFGERLSIYGEYDFRTHLPKENINISITQFRTVTGAIRVGDTYIITSSIPSGESLQETGW NGYDTHTGTIGAMLQITPKLTLNGSVGKVYYRYKSGTLTGRTQYFIGATTVAEGPPVSQEYRLPDTDSLIWNAQANYLLS DRLSLEAHYSRDFTDSVNQGAYKRDTYGGSIKYNHTIETTLGGFHTKSSYETVNREDTSTGATMTARIPLGANLAANLLG NYTHYKFSPDNVTPITEKTNRYSAQAGLDYTFRIMTMGLGYTWNFNDSNVEAHDYFNNIVWLQAKLTY >Mature_467_residues SCCVAATAHAEFKLTPSLIIREEYNDNIDLTNENRRDDFITTIVPSLNALIDTNLLKLNLDYGLYFKLFAKHSEKDDTSL ARTQRIRLDSTFNPIRDILFLKMSDVYARVPIDDRRQVGVGNDFVNTTDSNIFIANPYLVYPITSSISLTAGYTYKNTWY DDPQGQSAQDHTVTGRLTKSFGERLSIYGEYDFRTHLPKENINISITQFRTVTGAIRVGDTYIITSSIPSGESLQETGWN GYDTHTGTIGAMLQITPKLTLNGSVGKVYYRYKSGTLTGRTQYFIGATTVAEGPPVSQEYRLPDTDSLIWNAQANYLLSD RLSLEAHYSRDFTDSVNQGAYKRDTYGGSIKYNHTIETTLGGFHTKSSYETVNREDTSTGATMTARIPLGANLAANLLGN YTHYKFSPDNVTPITEKTNRYSAQAGLDYTFRIMTMGLGYTWNFNDSNVEAHDYFNNIVWLQAKLTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52707; Mature: 52576
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCCVAATAHAEFKLTPSLIIREEYNDNIDLTNENRRDDFITTIVPSLNALIDTNLLKLN CCEEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE LDYGLYFKLFAKHSEKDDTSLARTQRIRLDSTFNPIRDILFLKMSDVYARVPIDDRRQVG ECCCEEEEEEECCCCCCCHHHHHHEEEEECCCCCHHHHEEEEEECCEEEECCCCCCCCCC VGNDFVNTTDSNIFIANPYLVYPITSSISLTAGYTYKNTWYDDPQGQSAQDHTVTGRLTK CCCCCCCCCCCEEEEECCEEEEEECCCEEEEECEEECCCCCCCCCCCCCCCCEEEHHHHH SFGERLSIYGEYDFRTHLPKENINISITQFRTVTGAIRVGDTYIITSSIPSGESLQETGW HCCCEEEEEEECCCEECCCCCCCCEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHCCC NGYDTHTGTIGAMLQITPKLTLNGSVGKVYYRYKSGTLTGRTQYFIGATTVAEGPPVSQE CCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCEECCCEEEEEEEEEECCCCCCCCC YRLPDTDSLIWNAQANYLLSDRLSLEAHYSRDFTDSVNQGAYKRDTYGGSIKYNHTIETT CCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCHHHCCCCEECCCCCCEEEECCEEEEC LGGFHTKSSYETVNREDTSTGATMTARIPLGANLAANLLGNYTHYKFSPDNVTPITEKTN CCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCC RYSAQAGLDYTFRIMTMGLGYTWNFNDSNVEAHDYFNNIVWLQAKLTY CEECCCCCCEEEEEEEECCCEEECCCCCCEEHHHHCCCEEEEEEEECC >Mature Secondary Structure SCCVAATAHAEFKLTPSLIIREEYNDNIDLTNENRRDDFITTIVPSLNALIDTNLLKLN CEEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE LDYGLYFKLFAKHSEKDDTSLARTQRIRLDSTFNPIRDILFLKMSDVYARVPIDDRRQVG ECCCEEEEEEECCCCCCCHHHHHHEEEEECCCCCHHHHEEEEEECCEEEECCCCCCCCCC VGNDFVNTTDSNIFIANPYLVYPITSSISLTAGYTYKNTWYDDPQGQSAQDHTVTGRLTK CCCCCCCCCCCEEEEECCEEEEEECCCEEEEECEEECCCCCCCCCCCCCCCCEEEHHHHH SFGERLSIYGEYDFRTHLPKENINISITQFRTVTGAIRVGDTYIITSSIPSGESLQETGW HCCCEEEEEEECCCEECCCCCCCCEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHCCC NGYDTHTGTIGAMLQITPKLTLNGSVGKVYYRYKSGTLTGRTQYFIGATTVAEGPPVSQE CCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCEECCCEEEEEEEEEECCCCCCCCC YRLPDTDSLIWNAQANYLLSDRLSLEAHYSRDFTDSVNQGAYKRDTYGGSIKYNHTIETT CCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCHHHCCCCEECCCCCCEEEECCEEEEC LGGFHTKSSYETVNREDTSTGATMTARIPLGANLAANLLGNYTHYKFSPDNVTPITEKTN CCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCC RYSAQAGLDYTFRIMTMGLGYTWNFNDSNVEAHDYFNNIVWLQAKLTY CEECCCCCCEEEEEEEECCCEEECCCCCCEEHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA