| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223218
Identifier: 78223218
GI number: 78223218
Start: 2250686
End: 2251285
Strand: Reverse
Name: 78223218
Synonym: Gmet_2011
Alternate gene names: NA
Gene position: 2251285-2250686 (Counterclockwise)
Preceding gene: 78223219
Following gene: 78223217
Centisome position: 56.32
GC content: 40.33
Gene sequence:
>600_bases ATGCTGAGGTTCATGCCAGATAACGTCAATAAGATACTTGATGTTGGTTGCGGAGCAGGTGAGTTTGGCCACGCCCTAAA GTCACAAAGGCCGGTTGAGGTCTGGGGGGTTGAACTCAGTCATGAAGCTGCTAAGGAAGCTCAAACAAAATTGGACAAAG TAATTGTGGGAAGCATTGAAGCTGGGCCTCTGTCGTTACCGGAATTATATTTTGATTGTATAGTGTTTAATGATGTCCTC GAGCATTTGGTTGACCCGTGGGCTATTTTGGTTGGAATTAAGGCATTCATGCAACCAGATTGCCGCGTTGTCGCTTCTAT TCCGAACGTGAGATATTACGATAACATAAAACAACTCATTAAATACAAACAGTGGAAATACAATGACGAAGGCATTTTAG ACAAGACTCACCTAAGATTTTTTACGAACGAAAGTATCAAAGATTTATTCGATATGTGTGGATATAAAATCATTAGTATG AAAGGAATAGGCGAAACCCAGTTTCCGTGGAAATTCAGGATGATAAATCAGCTGTTGGGCAATACTTTCGATGATATGAA ATATAGGCAATTTGCGTGTGTTGGGATGCAAAAAGATTAG
Upstream 100 bases:
>100_bases CGGTGTTAGGTGACGCTGACCGATATTAGGAGTTTTAATGGAAAATTTACTCGGTTCTAATCATAAACCAGCTAATTACT ATAACAGCAGTAGGTTAGAA
Downstream 100 bases:
>100_bases TTAGTTTATTCTGTTTGTGTACAGCTAACTCGGGCTAATCGAACTTGGGCATTTGATTTTATGGTAAAAGTTACAATTAT AATACCAACTTATAACCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; O-Antigen Biosynthesis Protein; Glycosyltransferase; SAM-Dependent Methyltransferase; SAM-Dependent O-Methyltransferase; Methionine Biosynthesis Protein MetW; Methyltransferase; Bifunctional SAM-Dependent Methyltransferase Type; Methyltransferase Family Protein; UbiE/COQ5 Methyltransferase Family Protein; Glycosyl Transferase; LOW QUALITY PROTEIN Glycosyl Transferase; Methylase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLRFMPDNVNKILDVGCGAGEFGHALKSQRPVEVWGVELSHEAAKEAQTKLDKVIVGSIEAGPLSLPELYFDCIVFNDVL EHLVDPWAILVGIKAFMQPDCRVVASIPNVRYYDNIKQLIKYKQWKYNDEGILDKTHLRFFTNESIKDLFDMCGYKIISM KGIGETQFPWKFRMINQLLGNTFDDMKYRQFACVGMQKD
Sequences:
>Translated_199_residues MLRFMPDNVNKILDVGCGAGEFGHALKSQRPVEVWGVELSHEAAKEAQTKLDKVIVGSIEAGPLSLPELYFDCIVFNDVL EHLVDPWAILVGIKAFMQPDCRVVASIPNVRYYDNIKQLIKYKQWKYNDEGILDKTHLRFFTNESIKDLFDMCGYKIISM KGIGETQFPWKFRMINQLLGNTFDDMKYRQFACVGMQKD >Mature_199_residues MLRFMPDNVNKILDVGCGAGEFGHALKSQRPVEVWGVELSHEAAKEAQTKLDKVIVGSIEAGPLSLPELYFDCIVFNDVL EHLVDPWAILVGIKAFMQPDCRVVASIPNVRYYDNIKQLIKYKQWKYNDEGILDKTHLRFFTNESIKDLFDMCGYKIISM KGIGETQFPWKFRMINQLLGNTFDDMKYRQFACVGMQKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22894; Mature: 22894
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFMPDNVNKILDVGCGAGEFGHALKSQRPVEVWGVELSHEAAKEAQTKLDKVIVGSIE CCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC AGPLSLPELYFDCIVFNDVLEHLVDPWAILVGIKAFMQPDCRVVASIPNVRYYDNIKQLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH KYKQWKYNDEGILDKTHLRFFTNESIKDLFDMCGYKIISMKGIGETQFPWKFRMINQLLG HHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHC NTFDDMKYRQFACVGMQKD CCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRFMPDNVNKILDVGCGAGEFGHALKSQRPVEVWGVELSHEAAKEAQTKLDKVIVGSIE CCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC AGPLSLPELYFDCIVFNDVLEHLVDPWAILVGIKAFMQPDCRVVASIPNVRYYDNIKQLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH KYKQWKYNDEGILDKTHLRFFTNESIKDLFDMCGYKIISMKGIGETQFPWKFRMINQLLG HHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHC NTFDDMKYRQFACVGMQKD CCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA