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The map label for this gene is 78223212

Identifier: 78223212

GI number: 78223212

Start: 2243312

End: 2244154

Strand: Reverse

Name: 78223212

Synonym: Gmet_2005

Alternate gene names: NA

Gene position: 2244154-2243312 (Counterclockwise)

Preceding gene: 78223213

Following gene: 78223211

Centisome position: 56.14

GC content: 60.74

Gene sequence:

>843_bases
ATGCTAAACGCCCTTAGTTTCGACATAGAGGACTGGTTCCAGGTGGAGAACCTTAAGGGGGCCATTGCCGCCGACAGCTG
GGATACGTGCGACCTGCGGGTGGTGAACAATACCCGCAAAATTTTGGACTTGTTGCGGCGCCACCAGACCCGGGCAACAT
TCTTCATTCTCGGATGGGTTGCGGAGCGGTGCCCCGATCTCGTGCGGGAGATTGCCGATGCAGGGCACGAGATCGCCAGC
CACGGCTATGGGCATGAACTGGTCTACACCCAGACCCCTGAGGAGTTCCGCCGGGATCTTCGGCGCTCGAAGGAGATTCT
TGAGGGGCTCACAGGAATGGCAGTGCGGGGGTACCGGGCGCCGTCGTTTTCCGTTAATCCGGAAACGCCCTGGGCTCTCG
ACGTGCTGGTTGACGAGGGGTTCACCTACGACTCCAGCGTGTTCCCCACCTCGTTCCATGACCGGTACGGCTTCAGCGGC
TCATCGCTCTCTCCGTTCCGCTTCGACAACGGGTTGGTGGAGGTGCCCCTGTCTACGGTAAGGTTCGGCGGCAAGAACAT
TCCCGCTGCCGGCGGGGGCTATTTCCGCCTCTTCCCCTATCCGTTCTTCCGCTATCTGGCAAAACGGATCAACGGCGAGG
GGAGGGCGCTTGTGTTCTATCTCCACCCCTGGGAGTTGGACCCGGAACAGCCGCGAATTCCGATTCGGCACGATTACCGG
TTCAGGCACTATGTGAACCTGTGCAAGACAGGCAGGCGTCTGGACCGCCTTCTGGGTGATTTCAGGTTCGGGGCGATGGG
GGAGCTTGTGGCAAGGGTTGGCGGCAAGGTTGCGGAGGCGTAG

Upstream 100 bases:

>100_bases
TGAAAGTACGAAAAGAGGCATAAAACACAAAGAGGCTAAAGGTCTTGGGGTTTATTTTCGTGTTTTCTCAATTTCGTGTT
TTCGTGGTGAAAGAATTTGA

Downstream 100 bases:

>100_bases
CAGAATCCCCATGGGTGATGCATCCGGTCAGCAGAAAGCTTGTGATCGTCCGATTACGGTCATGTACATCATCGACACCT
TCCTGTCCCCGTGCGGTTCA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Domain Protein; Sporulation Protein Polysaccharide Deacetylase Family; Hydrolase; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Xylanase/Chitin Deacetylase-Like Protein; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Family Sporulation Protein PdaB; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Pda4C; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLNALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWVAERCPDLVREIADAGHEIAS
HGYGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRAPSFSVNPETPWALDVLVDEGFTYDSSVFPTSFHDRYGFSG
SSLSPFRFDNGLVEVPLSTVRFGGKNIPAAGGGYFRLFPYPFFRYLAKRINGEGRALVFYLHPWELDPEQPRIPIRHDYR
FRHYVNLCKTGRRLDRLLGDFRFGAMGELVARVGGKVAEA

Sequences:

>Translated_280_residues
MLNALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWVAERCPDLVREIADAGHEIAS
HGYGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRAPSFSVNPETPWALDVLVDEGFTYDSSVFPTSFHDRYGFSG
SSLSPFRFDNGLVEVPLSTVRFGGKNIPAAGGGYFRLFPYPFFRYLAKRINGEGRALVFYLHPWELDPEQPRIPIRHDYR
FRHYVNLCKTGRRLDRLLGDFRFGAMGELVARVGGKVAEA
>Mature_280_residues
MLNALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWVAERCPDLVREIADAGHEIAS
HGYGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRAPSFSVNPETPWALDVLVDEGFTYDSSVFPTSFHDRYGFSG
SSLSPFRFDNGLVEVPLSTVRFGGKNIPAAGGGYFRLFPYPFFRYLAKRINGEGRALVFYLHPWELDPEQPRIPIRHDYR
FRHYVNLCKTGRRLDRLLGDFRFGAMGELVARVGGKVAEA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32031; Mature: 32031

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWV
CCCCEECCHHHHHHHHCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
AERCPDLVREIADAGHEIASHGYGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRA
HHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCC
PSFSVNPETPWALDVLVDEGFTYDSSVFPTSFHDRYGFSGSSLSPFRFDNGLVEVPLSTV
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCEEECCHHHH
RFGGKNIPAAGGGYFRLFPYPFFRYLAKRINGEGRALVFYLHPWELDPEQPRIPIRHDYR
HCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
FRHYVNLCKTGRRLDRLLGDFRFGAMGELVARVGGKVAEA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MLNALSFDIEDWFQVENLKGAIAADSWDTCDLRVVNNTRKILDLLRRHQTRATFFILGWV
CCCCEECCHHHHHHHHCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
AERCPDLVREIADAGHEIASHGYGHELVYTQTPEEFRRDLRRSKEILEGLTGMAVRGYRA
HHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCC
PSFSVNPETPWALDVLVDEGFTYDSSVFPTSFHDRYGFSGSSLSPFRFDNGLVEVPLSTV
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCEEECCHHHH
RFGGKNIPAAGGGYFRLFPYPFFRYLAKRINGEGRALVFYLHPWELDPEQPRIPIRHDYR
HCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
FRHYVNLCKTGRRLDRLLGDFRFGAMGELVARVGGKVAEA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA