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The map label for this gene is yedQ [C]

Identifier: 78223196

GI number: 78223196

Start: 2218831

End: 2220159

Strand: Direct

Name: yedQ [C]

Synonym: Gmet_1989

Alternate gene names: 78223196

Gene position: 2218831-2220159 (Clockwise)

Preceding gene: 78223187

Following gene: 78223197

Centisome position: 55.51

GC content: 53.12

Gene sequence:

>1329_bases
ATGAGCGACTCAACAAAACCCCTTCAAACCCGCACCCGCTTCACCCTTATCCAGAAACTCATCGTCAGTTATGTCGCGAT
GCTCTTTCTGACCACGACGGCCCTCGCCTTTTCGGTTATGGGGCTTTATTCCCTCAATCGTACCGCAAAGGAAATAGCGA
AAACCGATCTTTTTATAATCGATTCCGCGAATCGTCTCCGGGAATCAATGTTGGCCCAGGAACGTATCGCGGGGAAATAT
GCAATCCTCAAGAGCGACGAATTCAAACTTCTCTACAGTCAGCGCCAGTCTGAATTCCTGGCAATTCTCGGCGAAATTGG
CCAGCGGGACAACAACGGTCTCTTCCGCTCCCTGGTTGCCAGATACGATGCTTATCGGAAGGAAATTGAACGCGCCTTCG
CCGCCAGCACCACTGAGCCCTTGCCCGCCAAAAAGGAGGCCGACGCCGTCGTAAGCCTGATCGAAGATCTTTCCTCTTCC
CGGCAAAAGCTCCTTGGGAAAAAGCTGGCGGAAGCCGACCGGCGCGAGGCCGACACGGTAAAACTAACCCTCTTCCTGGC
ATTTTCAGGCTTTATCCTTGCTGTTACCGTAGCGGCACTCAACGTACACTCCATATCCACCTCCATAAGAAAACTCAAAA
AGGGAATGCACCGGATAGCAGAAGGTGACTTCGATTACGACCCCCAAATTCCCATCGGTGACGAAATCGGTGCCCTGGCA
GAGGATTTCTCACGCATGGGGAAAAAATTAAAGGAACTGGAGCAGATCAGCCTCGACGCAAGTCCGCTGACCCGGCTCCC
CGGCAACATTGCCATCGAGCGAGTGCTGAACAAACTTCTCCAATCCGGTGAACCCTTTGCGGTCTGCTATGCCGATCTCG
ATAATTTCAAGGCCTACAATGACCGTTACGGTTACATCAAAGCTAGCGAAGTAATTAAATTGACCGCGGAACTGATCCAC
GATACAGTTCGTGAACTTGCCGGTGGCAACGCTTTCGTCGGCCATGTGGGAGGTGATGATTTCGTAATGGTTGTGGCGGC
CGAACGGGGGGGCTCCCTCTGTGAAGCGGTCATAAAAAGGTTTGACGACTTCATCCGCAACCATTATTCGGCAGAGGATC
TGGCTCGTGGCGCCATTGAAGGTGTTGACCGCTATGGCGTTTCCCGCACCTTCCCCATCATGAGCATCTCTGTGGCCGTC
GTTATCAGTCAACAGGGAGAGTTCACCTCGGCGGTGCAGATAGCAAAGGCGGCGGCCGACATCAAGGATCTGCTGAAAAA
ATCTCCCGGCAGCAACTACCTGATCAACCGACGCAGGAATCCCCGATGA

Upstream 100 bases:

>100_bases
CTCGGGCTTCCCCCCTTGCATTTCCAGAGTCATGTTGTGTCGTATTGTTGACTTGACTCAATCACTGAACTACAATAGAG
CGTTTTCGAGGAAAAACTGA

Downstream 100 bases:

>100_bases
CTTCACGTACGATCATCATACTTATGGTTACGGCTTGCCTCTCAGGCTGCACCACCGTCCAGAAGTCTCTGGAAAATCAG
CGCCTGCGCACCACACAACA

Product: diguanylate cyclase

Products: NA

Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Diguanylate Cyclase; EAL/GGDEF Domain-Containing Protein; GGDEF Domain-Containing Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; GGDEF Domain Protein; Signal Transduction Protein; Signaling Protein; Response Regulator Receiver Protein; Response Regulator Receiver; Sensory Box/GGDEF Family Protein; EAL Domain-Containing Protein; GGDEF/EAL Sensory Box Protein; Histidine Kinase; Two-Component System Response Regulator Receiver; Response Regulator; EAL Domain Protein; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Diguanylate Cyclase/Phosphodiesterase Family Protein; Ggdef Domain Protein; EAL Domain Proteni; Signal Protein; Sensory Box Protein; HAMP Domain-Containing Protein; EAL Domain/GGDEF Domain-Containing Protein; EAL Domain/GGDEF Domain Protein; CheY-Like Response Regulator Modulated Diguanylate Cyclase; Diguanylate Phosphodiesterase; GGDEFCBS:EAL Domain-Containing Protein; GGDEF Domain/HAMP Domain-Containing Protein; Phosphodiesterase; EAL Domain-Containing; GGDEF Family Protein; Diguanylate Cyclase/Phosphodiesterase With Cbs Domains; Methyl-Accepting Chemotaxis Sensory Transducer; Eal/Ggdef Domain Protein

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSDSTKPLQTRTRFTLIQKLIVSYVAMLFLTTTALAFSVMGLYSLNRTAKEIAKTDLFIIDSANRLRESMLAQERIAGKY
AILKSDEFKLLYSQRQSEFLAILGEIGQRDNNGLFRSLVARYDAYRKEIERAFAASTTEPLPAKKEADAVVSLIEDLSSS
RQKLLGKKLAEADRREADTVKLTLFLAFSGFILAVTVAALNVHSISTSIRKLKKGMHRIAEGDFDYDPQIPIGDEIGALA
EDFSRMGKKLKELEQISLDASPLTRLPGNIAIERVLNKLLQSGEPFAVCYADLDNFKAYNDRYGYIKASEVIKLTAELIH
DTVRELAGGNAFVGHVGGDDFVMVVAAERGGSLCEAVIKRFDDFIRNHYSAEDLARGAIEGVDRYGVSRTFPIMSISVAV
VISQQGEFTSAVQIAKAAADIKDLLKKSPGSNYLINRRRNPR

Sequences:

>Translated_442_residues
MSDSTKPLQTRTRFTLIQKLIVSYVAMLFLTTTALAFSVMGLYSLNRTAKEIAKTDLFIIDSANRLRESMLAQERIAGKY
AILKSDEFKLLYSQRQSEFLAILGEIGQRDNNGLFRSLVARYDAYRKEIERAFAASTTEPLPAKKEADAVVSLIEDLSSS
RQKLLGKKLAEADRREADTVKLTLFLAFSGFILAVTVAALNVHSISTSIRKLKKGMHRIAEGDFDYDPQIPIGDEIGALA
EDFSRMGKKLKELEQISLDASPLTRLPGNIAIERVLNKLLQSGEPFAVCYADLDNFKAYNDRYGYIKASEVIKLTAELIH
DTVRELAGGNAFVGHVGGDDFVMVVAAERGGSLCEAVIKRFDDFIRNHYSAEDLARGAIEGVDRYGVSRTFPIMSISVAV
VISQQGEFTSAVQIAKAAADIKDLLKKSPGSNYLINRRRNPR
>Mature_441_residues
SDSTKPLQTRTRFTLIQKLIVSYVAMLFLTTTALAFSVMGLYSLNRTAKEIAKTDLFIIDSANRLRESMLAQERIAGKYA
ILKSDEFKLLYSQRQSEFLAILGEIGQRDNNGLFRSLVARYDAYRKEIERAFAASTTEPLPAKKEADAVVSLIEDLSSSR
QKLLGKKLAEADRREADTVKLTLFLAFSGFILAVTVAALNVHSISTSIRKLKKGMHRIAEGDFDYDPQIPIGDEIGALAE
DFSRMGKKLKELEQISLDASPLTRLPGNIAIERVLNKLLQSGEPFAVCYADLDNFKAYNDRYGYIKASEVIKLTAELIHD
TVRELAGGNAFVGHVGGDDFVMVVAAERGGSLCEAVIKRFDDFIRNHYSAEDLARGAIEGVDRYGVSRTFPIMSISVAVV
ISQQGEFTSAVQIAKAAADIKDLLKKSPGSNYLINRRRNPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48969; Mature: 48838

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50885 HAMP ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTKPLQTRTRFTLIQKLIVSYVAMLFLTTTALAFSVMGLYSLNRTAKEIAKTDLFII
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
DSANRLRESMLAQERIAGKYAILKSDEFKLLYSQRQSEFLAILGEIGQRDNNGLFRSLVA
ECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RYDAYRKEIERAFAASTTEPLPAKKEADAVVSLIEDLSSSRQKLLGKKLAEADRREADTV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLTLFLAFSGFILAVTVAALNVHSISTSIRKLKKGMHRIAEGDFDYDPQIPIGDEIGALA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
EDFSRMGKKLKELEQISLDASPLTRLPGNIAIERVLNKLLQSGEPFAVCYADLDNFKAYN
HHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECHHCCHHCC
DRYGYIKASEVIKLTAELIHDTVRELAGGNAFVGHVGGDDFVMVVAAERGGSLCEAVIKR
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHH
FDDFIRNHYSAEDLARGAIEGVDRYGVSRTFPIMSISVAVVISQQGEFTSAVQIAKAAAD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHH
IKDLLKKSPGSNYLINRRRNPR
HHHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SDSTKPLQTRTRFTLIQKLIVSYVAMLFLTTTALAFSVMGLYSLNRTAKEIAKTDLFII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
DSANRLRESMLAQERIAGKYAILKSDEFKLLYSQRQSEFLAILGEIGQRDNNGLFRSLVA
ECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RYDAYRKEIERAFAASTTEPLPAKKEADAVVSLIEDLSSSRQKLLGKKLAEADRREADTV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLTLFLAFSGFILAVTVAALNVHSISTSIRKLKKGMHRIAEGDFDYDPQIPIGDEIGALA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
EDFSRMGKKLKELEQISLDASPLTRLPGNIAIERVLNKLLQSGEPFAVCYADLDNFKAYN
HHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECHHCCHHCC
DRYGYIKASEVIKLTAELIHDTVRELAGGNAFVGHVGGDDFVMVVAAERGGSLCEAVIKR
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHH
FDDFIRNHYSAEDLARGAIEGVDRYGVSRTFPIMSISVAVVISQQGEFTSAVQIAKAAAD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHH
IKDLLKKSPGSNYLINRRRNPR
HHHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA