| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223197
Identifier: 78223197
GI number: 78223197
Start: 2220156
End: 2220683
Strand: Direct
Name: 78223197
Synonym: Gmet_1990
Alternate gene names: NA
Gene position: 2220156-2220683 (Clockwise)
Preceding gene: 78223196
Following gene: 78223198
Centisome position: 55.54
GC content: 51.89
Gene sequence:
>528_bases ATGACTTCACGTACGATCATCATACTTATGGTTACGGCTTGCCTCTCAGGCTGCACCACCGTCCAGAAGTCTCTGGAAAA TCAGCGCCTGCGCACCACACAACAAGACAAGCTCGAGCAAGCGGTGAAACTCATTGAAAGGGGAAACACAGAAAAGGCCG AAACGCTCCTTGAGGAGGTCGTGGCGGCACAAGGAGTGCGGGGGATCACCGATGAAGCCCTGTTTCGTCTTGCTCTCCTG TCCATGCCGTCGGATCTGAATCGGGAAGATTTGGCCAATGCGGTAAAATATCTCGAACGACTTCAGAAAGAGTATCCGGT CAGCCCCTGGGCAACCCAGTCGTCATCACTTACCGACTTGCTCGCCGTCCTGCCGCGTCACCTTCAATCGACAACGGAAC TCCGTCGTCAGATAAAAAGCCTTAGGGACCTGAACCTCTCTCTGACTCGGGAAAACAAGGAAATGAGGCTCAATATCGAG AAGATAAAAAACCTGGACCTGCAACTGGAGAAGAAAGTCAAACCCTAA
Upstream 100 bases:
>100_bases CCTCGGCGGTGCAGATAGCAAAGGCGGCGGCCGACATCAAGGATCTGCTGAAAAAATCTCCCGGCAGCAACTACCTGATC AACCGACGCAGGAATCCCCG
Downstream 100 bases:
>100_bases TACTTGTTAAATTAACCGACACAATTACTGGCCAAAATTCAAAAAACTTTACAGAAAAGTCTCCACACCCACCCACAACA ACAGAACCCCTTGAAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTSRTIIILMVTACLSGCTTVQKSLENQRLRTTQQDKLEQAVKLIERGNTEKAETLLEEVVAAQGVRGITDEALFRLALL SMPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSLTDLLAVLPRHLQSTTELRRQIKSLRDLNLSLTRENKEMRLNIE KIKNLDLQLEKKVKP
Sequences:
>Translated_175_residues MTSRTIIILMVTACLSGCTTVQKSLENQRLRTTQQDKLEQAVKLIERGNTEKAETLLEEVVAAQGVRGITDEALFRLALL SMPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSLTDLLAVLPRHLQSTTELRRQIKSLRDLNLSLTRENKEMRLNIE KIKNLDLQLEKKVKP >Mature_174_residues TSRTIIILMVTACLSGCTTVQKSLENQRLRTTQQDKLEQAVKLIERGNTEKAETLLEEVVAAQGVRGITDEALFRLALLS MPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSLTDLLAVLPRHLQSTTELRRQIKSLRDLNLSLTRENKEMRLNIEK IKNLDLQLEKKVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19941; Mature: 19810
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRTIIILMVTACLSGCTTVQKSLENQRLRTTQQDKLEQAVKLIERGNTEKAETLLEEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAAQGVRGITDEALFRLALLSMPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSLTDL HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LAVLPRHLQSTTELRRQIKSLRDLNLSLTRENKEMRLNIEKIKNLDLQLEKKVKP HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCHHHHHCCCHHHHCCCCC >Mature Secondary Structure TSRTIIILMVTACLSGCTTVQKSLENQRLRTTQQDKLEQAVKLIERGNTEKAETLLEEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAAQGVRGITDEALFRLALLSMPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSLTDL HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LAVLPRHLQSTTELRRQIKSLRDLNLSLTRENKEMRLNIEKIKNLDLQLEKKVKP HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA