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The map label for this gene is petC [H]

Identifier: 78223129

GI number: 78223129

Start: 2147788

End: 2148207

Strand: Direct

Name: petC [H]

Synonym: Gmet_1922

Alternate gene names: 78223129

Gene position: 2147788-2148207 (Clockwise)

Preceding gene: 78223126

Following gene: 78223130

Centisome position: 53.73

GC content: 55.0

Gene sequence:

>420_bases
ATGCAGAACGCCAGCAGGCGGAAATTCCTTGGTCTCTGCCTTGGCGGCCTGGGAATGGCAGGGGCCGTGGCAGGAGCGTA
TTCCGTTCTCAGCTATCTTGCCCCCCTTTCAGATGAAGGCACTGGCGGAAAGGTCTCTTTTCCCCTCACGGAAATCCCTC
CGAATGGCGCGAAATTTTTTGATTTTCGCGGGACAACCGGTGTTATCATCAGAAAACAAAATAGTGAACTCGTAGCCCTG
TCAGCCATCTGCACACACTTAGGATGTATCGTCCAGTGGGAACAAGACAAGCAGGACTTTCTCTGCCCCTGTCACGGTGG
CCGCTACAACTCCGACGGTTCCGTCATCTCAGGCCCACCGCCCAAGCCCCTGGAGAAGCTTGCCATCACCATAACAAACG
GAATCGTGACCGTGGGGTAA

Upstream 100 bases:

>100_bases
CGAAAAGTAGCGTCAACCCAGTGTTCAGAGGTCATGTTTGCAATGTGCTCCTGAGGGCCTATACTTAGTTCTCGAACACA
ATTCGTATTACGGAGGGATC

Downstream 100 bases:

>100_bases
ACCATCTATGTCCCCCTTGAAGAGTATCTACCACTGGTTGGACGTACGTATCGGAGTTGGTGAACTGGTGGAGAAACGCC
TCACCGGCTACCTCCTGCCC

Product: Rieske (2Fe-2S) region

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQNASRRKFLGLCLGGLGMAGAVAGAYSVLSYLAPLSDEGTGGKVSFPLTEIPPNGAKFFDFRGTTGVIIRKQNSELVAL
SAICTHLGCIVQWEQDKQDFLCPCHGGRYNSDGSVISGPPPKPLEKLAITITNGIVTVG

Sequences:

>Translated_139_residues
MQNASRRKFLGLCLGGLGMAGAVAGAYSVLSYLAPLSDEGTGGKVSFPLTEIPPNGAKFFDFRGTTGVIIRKQNSELVAL
SAICTHLGCIVQWEQDKQDFLCPCHGGRYNSDGSVISGPPPKPLEKLAITITNGIVTVG
>Mature_139_residues
MQNASRRKFLGLCLGGLGMAGAVAGAYSVLSYLAPLSDEGTGGKVSFPLTEIPPNGAKFFDFRGTTGVIIRKQNSELVAL
SAICTHLGCIVQWEQDKQDFLCPCHGGRYNSDGSVISGPPPKPLEKLAITITNGIVTVG

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 14583; Mature: 14583

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNASRRKFLGLCLGGLGMAGAVAGAYSVLSYLAPLSDEGTGGKVSFPLTEIPPNGAKFF
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEE
DFRGTTGVIIRKQNSELVALSAICTHLGCIVQWEQDKQDFLCPCHGGRYNSDGSVISGPP
EECCCEEEEEEECCCCEEHHHHHHHHHCEEEEECCCCCCEEECCCCCEECCCCCEECCCC
PKPLEKLAITITNGIVTVG
CCCHHHEEEEEECCEEEEC
>Mature Secondary Structure
MQNASRRKFLGLCLGGLGMAGAVAGAYSVLSYLAPLSDEGTGGKVSFPLTEIPPNGAKFF
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEE
DFRGTTGVIIRKQNSELVALSAICTHLGCIVQWEQDKQDFLCPCHGGRYNSDGSVISGPP
EECCCEEEEEEECCCCEEHHHHHHHHHCEEEEECCCCCCEEECCCCCEECCCCCEECCCC
PKPLEKLAITITNGIVTVG
CCCHHHEEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]