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The map label for this gene is petB [H]

Identifier: 78223130

GI number: 78223130

Start: 2148215

End: 2149318

Strand: Direct

Name: petB [H]

Synonym: Gmet_1923

Alternate gene names: 78223130

Gene position: 2148215-2149318 (Clockwise)

Preceding gene: 78223129

Following gene: 78223131

Centisome position: 53.74

GC content: 56.61

Gene sequence:

>1104_bases
ATGTCCCCCTTGAAGAGTATCTACCACTGGTTGGACGTACGTATCGGAGTTGGTGAACTGGTGGAGAAACGCCTCACCGG
CTACCTCCTGCCCCGCTCCATCAACGCCTGGTACTCCCTTGGCAGTGTACTTCTGATTATCTTCACACTACAGGTCATCA
CCGGCATTCTCCTTCTTGTCTACTACGTACCCGATGCTGAAAAGGCTTTCAAGAGCGTCAGCGCCATCATGAACGATGTC
CCCTTCGGCTGGCTGATCCGCCTGTGCCACGCCGTGGGCTCCAACATGATGGTGGCGGTCCTGCTGCTTCATATGCTGTC
GGTCCTTTTCATGGGAAGTTACAAACGCCCCCGGGAACTGAACTGGCTGACCGGTTTCATCCTGTTCAACCTGGTCCTGG
CGATTTCACTCACCGGCTATCTCCTTCCCTGGAGCCAGCTCTCCTTTTGGGCCACAACGGTGGCCACCAACAGCGCCGGG
GCCATCCCGGTCATCGGCAACTATCTCGTGGAATTTCTCCGGGGCGGCAAGCTGGTGGGGGCGCCCACTCTGGGACGCTT
CTTCGCCGTTCACGTGGCACTCCTTCCGCTCCTGATCGGGGCGTTCATCGGCGGACACCTCTTCCTGCTGGAACGGATCG
GCGTTTCCACCCCGCCTTTCGGGCAAAAAGAGTCGAAAAATACCTGGATGGGAGACCAGTTTCGCTACGAATCTCACCCC
GGCGGCATCCCCTTCTTTCCCAACTATATGCTCCAGGACATGACTTCCATCCTGATTTACCTGGCAATCTTTTTCTGCGT
CATATTCTATATCCCCTACATCTTCTTACCGCCAACCGCCTTCGTACCGGCCGATCCTTACAAAACTCCCGCCCATATCA
AACCCGAATGGTATTTCCTCGCCAACTACCAAACCTTGAAGGTCTTCCCGAACGAACTCCTGGGGCTCCTGGTGCAGGGG
GCCGTCATGACCTTCCTGGCACTCCTACCGTTCATCGACAAGGGAAGGGAGCGGCACCCGTTCAAACGTCCCCTCTTCCT
CGCCTGTTTCGTCGGCGGAATTCTTCTCTACGTTGCCATGGCGGTCTGGGGGCATTACTCATGA

Upstream 100 bases:

>100_bases
AACTCCGACGGTTCCGTCATCTCAGGCCCACCGCCCAAGCCCCTGGAGAAGCTTGCCATCACCATAACAAACGGAATCGT
GACCGTGGGGTAAACCATCT

Downstream 100 bases:

>100_bases
GACTATCAGCAACGTATAGTTCTTCTGCTCTCATTTGCCTGCCCCTGCTCTTACTCCTTTCGTTATTTCCCGCTGACGCC
CGCTGCCAGGAACAGACTGT

Product: cytochrome b/b6-like

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSPLKSIYHWLDVRIGVGELVEKRLTGYLLPRSINAWYSLGSVLLIIFTLQVITGILLLVYYVPDAEKAFKSVSAIMNDV
PFGWLIRLCHAVGSNMMVAVLLLHMLSVLFMGSYKRPRELNWLTGFILFNLVLAISLTGYLLPWSQLSFWATTVATNSAG
AIPVIGNYLVEFLRGGKLVGAPTLGRFFAVHVALLPLLIGAFIGGHLFLLERIGVSTPPFGQKESKNTWMGDQFRYESHP
GGIPFFPNYMLQDMTSILIYLAIFFCVIFYIPYIFLPPTAFVPADPYKTPAHIKPEWYFLANYQTLKVFPNELLGLLVQG
AVMTFLALLPFIDKGRERHPFKRPLFLACFVGGILLYVAMAVWGHYS

Sequences:

>Translated_367_residues
MSPLKSIYHWLDVRIGVGELVEKRLTGYLLPRSINAWYSLGSVLLIIFTLQVITGILLLVYYVPDAEKAFKSVSAIMNDV
PFGWLIRLCHAVGSNMMVAVLLLHMLSVLFMGSYKRPRELNWLTGFILFNLVLAISLTGYLLPWSQLSFWATTVATNSAG
AIPVIGNYLVEFLRGGKLVGAPTLGRFFAVHVALLPLLIGAFIGGHLFLLERIGVSTPPFGQKESKNTWMGDQFRYESHP
GGIPFFPNYMLQDMTSILIYLAIFFCVIFYIPYIFLPPTAFVPADPYKTPAHIKPEWYFLANYQTLKVFPNELLGLLVQG
AVMTFLALLPFIDKGRERHPFKRPLFLACFVGGILLYVAMAVWGHYS
>Mature_366_residues
SPLKSIYHWLDVRIGVGELVEKRLTGYLLPRSINAWYSLGSVLLIIFTLQVITGILLLVYYVPDAEKAFKSVSAIMNDVP
FGWLIRLCHAVGSNMMVAVLLLHMLSVLFMGSYKRPRELNWLTGFILFNLVLAISLTGYLLPWSQLSFWATTVATNSAGA
IPVIGNYLVEFLRGGKLVGAPTLGRFFAVHVALLPLLIGAFIGGHLFLLERIGVSTPPFGQKESKNTWMGDQFRYESHPG
GIPFFPNYMLQDMTSILIYLAIFFCVIFYIPYIFLPPTAFVPADPYKTPAHIKPEWYFLANYQTLKVFPNELLGLLVQGA
VMTFLALLPFIDKGRERHPFKRPLFLACFVGGILLYVAMAVWGHYS

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=327, Percent_Identity=36.085626911315, Blast_Score=192, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6226529, Length=320, Percent_Identity=35.9375, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6226532, Length=242, Percent_Identity=36.3636363636364, Blast_Score=139, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6226531, Length=146, Percent_Identity=41.0958904109589, Blast_Score=109, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6226530, Length=136, Percent_Identity=36.7647058823529, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 41270; Mature: 41139

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLKSIYHWLDVRIGVGELVEKRLTGYLLPRSINAWYSLGSVLLIIFTLQVITGILLLV
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYVPDAEKAFKSVSAIMNDVPFGWLIRLCHAVGSNMMVAVLLLHMLSVLFMGSYKRPREL
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH
NWLTGFILFNLVLAISLTGYLLPWSQLSFWATTVATNSAGAIPVIGNYLVEFLRGGKLVG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEC
APTLGRFFAVHVALLPLLIGAFIGGHLFLLERIGVSTPPFGQKESKNTWMGDQFRYESHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC
GGIPFFPNYMLQDMTSILIYLAIFFCVIFYIPYIFLPPTAFVPADPYKTPAHIKPEWYFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
ANYQTLKVFPNELLGLLVQGAVMTFLALLPFIDKGRERHPFKRPLFLACFVGGILLYVAM
ECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AVWGHYS
HHHCCCC
>Mature Secondary Structure 
SPLKSIYHWLDVRIGVGELVEKRLTGYLLPRSINAWYSLGSVLLIIFTLQVITGILLLV
CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYVPDAEKAFKSVSAIMNDVPFGWLIRLCHAVGSNMMVAVLLLHMLSVLFMGSYKRPREL
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH
NWLTGFILFNLVLAISLTGYLLPWSQLSFWATTVATNSAGAIPVIGNYLVEFLRGGKLVG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEC
APTLGRFFAVHVALLPLLIGAFIGGHLFLLERIGVSTPPFGQKESKNTWMGDQFRYESHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC
GGIPFFPNYMLQDMTSILIYLAIFFCVIFYIPYIFLPPTAFVPADPYKTPAHIKPEWYFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
ANYQTLKVFPNELLGLLVQGAVMTFLALLPFIDKGRERHPFKRPLFLACFVGGILLYVAM
ECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AVWGHYS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA