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The map label for this gene is yfhP [C]

Identifier: 78223114

GI number: 78223114

Start: 2128730

End: 2129191

Strand: Reverse

Name: yfhP [C]

Synonym: Gmet_1907

Alternate gene names: 78223114

Gene position: 2129191-2128730 (Counterclockwise)

Preceding gene: 78223115

Following gene: 78223113

Centisome position: 53.26

GC content: 59.31

Gene sequence:

>462_bases
ATGATTTCCAAAAAGACCAAATACGCCCTCAAGGCGCTCCTTTACCTGGCTCGGGAGTACGACCGGGGCCCGATTCTCAT
TGCGGACCTGGCCCGGGAAGAGCGGATTCCCAAGAAGTTTCTGGAATTGATCCTGCTGGCGCTCAAGAACGCCGGGGTGC
TCCAGAGCAAGAAGGGGAAGGGGGGCGGGTACTACCTGGCCCACCCACCACGGGAGATCACCATGGGTAAGGTGATCAGG
ACTCTGGAGGGACCTTTGGCCCCGGTGCCGTGTGTGAGCGAGACCGCCTATGCCCGGTGCGAGGAGTGTGACGACGAATG
GAGCTGCGGCATCCGTCTCGTGATGAAAGATGTTCGTGACGCCATGGCGCAGATTCTCGACAATGCCACCCTGGCCGCTG
TTCTGGAGCGGATCGAGCAGGAGAAGCAGAAGAAGGACGGGGCGCTTTTTTATGCAATCTGA

Upstream 100 bases:

>100_bases
CGGCCCCGCAGGATTTTTGCAAGAGCCTCTTCGCATCATAAATTTATCTTGACGCAACGCGGGAAAGAGTTTACTTATTC
TCTATAGGATTTGTAGACAA

Downstream 100 bases:

>100_bases
AAGCAGCATTTTTTTGTGTCGTAAAAGACTATAAAATCGATAGGCTAAAACAACAAAAGGAGCAGACCATGAAACCGATC
AGAACCATCGCCACCCTCGC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MISKKTKYALKALLYLAREYDRGPILIADLAREERIPKKFLELILLALKNAGVLQSKKGKGGGYYLAHPPREITMGKVIR
TLEGPLAPVPCVSETAYARCEECDDEWSCGIRLVMKDVRDAMAQILDNATLAAVLERIEQEKQKKDGALFYAI

Sequences:

>Translated_153_residues
MISKKTKYALKALLYLAREYDRGPILIADLAREERIPKKFLELILLALKNAGVLQSKKGKGGGYYLAHPPREITMGKVIR
TLEGPLAPVPCVSETAYARCEECDDEWSCGIRLVMKDVRDAMAQILDNATLAAVLERIEQEKQKKDGALFYAI
>Mature_153_residues
MISKKTKYALKALLYLAREYDRGPILIADLAREERIPKKFLELILLALKNAGVLQSKKGKGGGYYLAHPPREITMGKVIR
TLEGPLAPVPCVSETAYARCEECDDEWSCGIRLVMKDVRDAMAQILDNATLAAVLERIEQEKQKKDGALFYAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=138, Percent_Identity=26.8115942028986, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17125; Mature: 17125

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKKTKYALKALLYLAREYDRGPILIADLAREERIPKKFLELILLALKNAGVLQSKKGK
CCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
GGGYYLAHPPREITMGKVIRTLEGPLAPVPCVSETAYARCEECDDEWSCGIRLVMKDVRD
CCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AMAQILDNATLAAVLERIEQEKQKKDGALFYAI
HHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MISKKTKYALKALLYLAREYDRGPILIADLAREERIPKKFLELILLALKNAGVLQSKKGK
CCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
GGGYYLAHPPREITMGKVIRTLEGPLAPVPCVSETAYARCEECDDEWSCGIRLVMKDVRD
CCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AMAQILDNATLAAVLERIEQEKQKKDGALFYAI
HHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]