Click here to switch to the map view.

The map label for this gene is 78223067

Identifier: 78223067

GI number: 78223067

Start: 2073768

End: 2074382

Strand: Reverse

Name: 78223067

Synonym: Gmet_1860

Alternate gene names: NA

Gene position: 2074382-2073768 (Counterclockwise)

Preceding gene: 78223068

Following gene: 78223066

Centisome position: 51.89

GC content: 56.75

Gene sequence:

>615_bases
ATGAACCGTCAGAGGCTCATTCTTTCCATTCTCCTTGTGGTGCTCGTGGTCGCCGCCATCGTGAGCTACATCAGAATGCC
GTGTCAGCAGACGGTATCGAAGGTGACATCCCCCCCGACGAAGGTCAGCCGTTCCCCAAAACCTAACGGAGCGGCTGCAA
CCGACGATAGAAAACTCAGGCTTGATCTTCTTGAATGTACTTCAAACCGGTTTGCCGGTTTTCGACGAAATATATTCCGT
CCTATTTTCCGCGGCGAAACGCAGCAATCGCGTCCGTTGCCGTTGACCTTGCCGAAGGCCGTTCCGCTTCCTCCTCCGCC
TGCAGCTCCAGTGGCGCTGCCGCCCCCGATGCCGGTCGCACCGCAACCGCCGCAGGTGGTGCGGGACATGGCAAAATTCA
CCTTCCTGGGGTTTCTCAAGAAGGATAACCACAAAACCATCTTCCTTGCCCGTGACAAGGAGATTATCCTGGTACGCCAG
GGCGACAAAATTGCCGGGAACTACGAAGCGACAACCATCACCGATGAGGCGCTGTCAATCCGCTCTCTTACCGACGGAAG
CGAGATGGTGATTCCCCTTGTCGAGAACCGGCCTCTCGCCGGCCAGATACGATGA

Upstream 100 bases:

>100_bases
TTTTGACGATAGACTCGATTTCCCTCTCAAACACCAGCATGATCGAGGAGGCGGTTTCTCTCAAGATGCAACTTTCCGCC
TATCTGCGTCCGGAGGGGAA

Downstream 100 bases:

>100_bases
ACGTCCGATGGTTTAAGGAGCCGCATACATGAGGATCATCTTCAAGATAATAGCTTTCTTGTCCTTTTTTGCTTTCCTGT
CAGGGTGTGGGGCCGGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNRQRLILSILLVVLVVAAIVSYIRMPCQQTVSKVTSPPTKVSRSPKPNGAAATDDRKLRLDLLECTSNRFAGFRRNIFR
PIFRGETQQSRPLPLTLPKAVPLPPPPAAPVALPPPMPVAPQPPQVVRDMAKFTFLGFLKKDNHKTIFLARDKEIILVRQ
GDKIAGNYEATTITDEALSIRSLTDGSEMVIPLVENRPLAGQIR

Sequences:

>Translated_204_residues
MNRQRLILSILLVVLVVAAIVSYIRMPCQQTVSKVTSPPTKVSRSPKPNGAAATDDRKLRLDLLECTSNRFAGFRRNIFR
PIFRGETQQSRPLPLTLPKAVPLPPPPAAPVALPPPMPVAPQPPQVVRDMAKFTFLGFLKKDNHKTIFLARDKEIILVRQ
GDKIAGNYEATTITDEALSIRSLTDGSEMVIPLVENRPLAGQIR
>Mature_204_residues
MNRQRLILSILLVVLVVAAIVSYIRMPCQQTVSKVTSPPTKVSRSPKPNGAAATDDRKLRLDLLECTSNRFAGFRRNIFR
PIFRGETQQSRPLPLTLPKAVPLPPPPAAPVALPPPMPVAPQPPQVVRDMAKFTFLGFLKKDNHKTIFLARDKEIILVRQ
GDKIAGNYEATTITDEALSIRSLTDGSEMVIPLVENRPLAGQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22562; Mature: 22562

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQRLILSILLVVLVVAAIVSYIRMPCQQTVSKVTSPPTKVSRSPKPNGAAATDDRKLR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHH
LDLLECTSNRFAGFRRNIFRPIFRGETQQSRPLPLTLPKAVPLPPPPAAPVALPPPMPVA
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
PQPPQVVRDMAKFTFLGFLKKDNHKTIFLARDKEIILVRQGDKIAGNYEATTITDEALSI
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECHHHHEE
RSLTDGSEMVIPLVENRPLAGQIR
EECCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNRQRLILSILLVVLVVAAIVSYIRMPCQQTVSKVTSPPTKVSRSPKPNGAAATDDRKLR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHH
LDLLECTSNRFAGFRRNIFRPIFRGETQQSRPLPLTLPKAVPLPPPPAAPVALPPPMPVA
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
PQPPQVVRDMAKFTFLGFLKKDNHKTIFLARDKEIILVRQGDKIAGNYEATTITDEALSI
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECHHHHEE
RSLTDGSEMVIPLVENRPLAGQIR
EECCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA