| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223013
Identifier: 78223013
GI number: 78223013
Start: 2021506
End: 2022192
Strand: Direct
Name: 78223013
Synonym: Gmet_1806
Alternate gene names: NA
Gene position: 2021506-2022192 (Clockwise)
Preceding gene: 78223012
Following gene: 78223014
Centisome position: 50.57
GC content: 65.5
Gene sequence:
>687_bases ATGAACGGTACCGCACTCAACTGGTTGGAGCTCTGTCGCACCGTGGGTCCGTGCCTACGGCCGGGTGGGACCGCGCTTAC AGACCGGGCACTGGAGGTCTGCAACCTTTCCGCCGATTCCCTGATTGCCGATGTCGGCTGCGGTGCCGGCGGAACCCTGT ATCACCTGGAACAAATCGGTTTCCGCCGCCTGGTGGGGCTCGACCCGTCGGAGACCCTTCTCGGGGATGCCGCCCCCCGC CTCGAAACGGCCCGCCTTATCCGGGGGGAGGCTGCAACGATCCCCCTCCGGAGCGCCACCGTCGATCTCCTTCTGTGTGA ATGCGTCCTTTCCGTCCTCCCTGGCCGGTCGGCTCCCCTCCGGGAGTTTGCGCGGGTCGTGAAGGACGGCGGATATCTGG TAGTGAGCGACGTTTTCAGCACGGCTGGAGACGAGGCCACAGGACAGGCCGGCGGGCTCCTCACCCGCAAGGAACTCCTT GCCGCGGTGGCCGGTAATGGCTTCACCCTCCTTCGGTGGGAAACCCACGACCGTTTGCTGAAGGAATTCGCGGTCCGCAT GATCCTGGCCGGCGAATGCCTGCCGGATGCGTGGAAGGGTGGTACGGAGAGGAAAGGGGAGGCGGCCCGTGGGGGCCTCG GCTATTTCCTCATGGTGGCCCGAAAGGCTGAAGACCCGCTTCCGTAA
Upstream 100 bases:
>100_bases GCGGCTTCATCCTTGTCACTGAGGAGTTGGCAACCGGGAAGCTGGCCGCGGCAGAACAGGCGCTGGAAGACAAGTAACTT TCCGGCGGCACGGTGAACCG
Downstream 100 bases:
>100_bases CAGATAAAGGATAGTGTCATGGAAACAGTGAATCTGGGTGAAACCGAAAGCATCTGCCCCGTCTGCCTGAAAAGGATAGC GGCGACACGACAAGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Methyltransferase Domain Protein; MitM-Related Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNGTALNWLELCRTVGPCLRPGGTALTDRALEVCNLSADSLIADVGCGAGGTLYHLEQIGFRRLVGLDPSETLLGDAAPR LETARLIRGEAATIPLRSATVDLLLCECVLSVLPGRSAPLREFARVVKDGGYLVVSDVFSTAGDEATGQAGGLLTRKELL AAVAGNGFTLLRWETHDRLLKEFAVRMILAGECLPDAWKGGTERKGEAARGGLGYFLMVARKAEDPLP
Sequences:
>Translated_228_residues MNGTALNWLELCRTVGPCLRPGGTALTDRALEVCNLSADSLIADVGCGAGGTLYHLEQIGFRRLVGLDPSETLLGDAAPR LETARLIRGEAATIPLRSATVDLLLCECVLSVLPGRSAPLREFARVVKDGGYLVVSDVFSTAGDEATGQAGGLLTRKELL AAVAGNGFTLLRWETHDRLLKEFAVRMILAGECLPDAWKGGTERKGEAARGGLGYFLMVARKAEDPLP >Mature_228_residues MNGTALNWLELCRTVGPCLRPGGTALTDRALEVCNLSADSLIADVGCGAGGTLYHLEQIGFRRLVGLDPSETLLGDAAPR LETARLIRGEAATIPLRSATVDLLLCECVLSVLPGRSAPLREFARVVKDGGYLVVSDVFSTAGDEATGQAGGLLTRKELL AAVAGNGFTLLRWETHDRLLKEFAVRMILAGECLPDAWKGGTERKGEAARGGLGYFLMVARKAEDPLP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24176; Mature: 24176
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTALNWLELCRTVGPCLRPGGTALTDRALEVCNLSADSLIADVGCGAGGTLYHLEQIG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH FRRLVGLDPSETLLGDAAPRLETARLIRGEAATIPLRSATVDLLLCECVLSVLPGRSAPL HHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH REFARVVKDGGYLVVSDVFSTAGDEATGQAGGLLTRKELLAAVAGNGFTLLRWETHDRLL HHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHH KEFAVRMILAGECLPDAWKGGTERKGEAARGGLGYFLMVARKAEDPLP HHHHHHHHHHCCCCCHHHCCCCCCCCCHHCCCHHHHHEEECCCCCCCC >Mature Secondary Structure MNGTALNWLELCRTVGPCLRPGGTALTDRALEVCNLSADSLIADVGCGAGGTLYHLEQIG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH FRRLVGLDPSETLLGDAAPRLETARLIRGEAATIPLRSATVDLLLCECVLSVLPGRSAPL HHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH REFARVVKDGGYLVVSDVFSTAGDEATGQAGGLLTRKELLAAVAGNGFTLLRWETHDRLL HHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHH KEFAVRMILAGECLPDAWKGGTERKGEAARGGLGYFLMVARKAEDPLP HHHHHHHHHHCCCCCHHHCCCCCCCCCHHCCCHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA