| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222949
Identifier: 78222949
GI number: 78222949
Start: 1956550
End: 1957398
Strand: Direct
Name: 78222949
Synonym: Gmet_1740
Alternate gene names: NA
Gene position: 1956550-1957398 (Clockwise)
Preceding gene: 78222948
Following gene: 78222950
Centisome position: 48.95
GC content: 59.48
Gene sequence:
>849_bases ATGCCGCGGCTGCCGGGGAATAGTGCACTCGTTGACGCTGCCGGACGGGTGCTCCACTCCCTTCGGGAGATCAATTTCCT ATCTCAGGTGGAGCGTGAGCGATTCTACGTCGGCATACTTCCTCCGCGGCTCTTTGCGTACCTTGGCATCTCGCCGCAAA CCCTCTGCGGCGCCGACGGCCTGAGGCGCATCAAGGTCATCGCCCCGGAGGGGATAGGGATTGCGCGGATCGAGGTCAAG GCGCACCCGGCAGACACAGACACAGCCTTTTTTCTGGAACTGGCAGACACCCACTACGGCCAGATGGAGCTTTCATTCTG CATCATCGCCGATCCTGAAACGCCCCGCTATTACGTGGACAAGGACGCAGCGGGGCGAGACAACTGCTTTACGACCCTGG GCCGCAATATTCCCGAGGAACTCAGGGCCATGGAGGCGGGTCTCTTCCCGAACCAGACGAGGCGGGGACTACACCTTTTC GGGGAGTTCTTCCCCATCTTCGAGCGGTTCGTGGATTCCCTCGGAATGGAGATGATAGTGGCGGAGCCCCTGACCTACGA CAATGCCATCCGCTATGAAAAGTACGGTTTCGACTACATAACCGGAAAGCGGCTCATGCTGGAAATAGACCAGGAGTTCC GCCGGGGCGGAATCCTTTTCGGGCGGCTCGACGGTTCTAACCCGTTTCGGATGCCAGGTGCTGAGCGTACGGTGCGGGGG AGGAGTTGGGCCATCCACGACGGGATCATGGACGAACCCTGGGACGAGGTGCGGATCTACAAGACGGTTGGAGAACATGC TGGAATCGACACCTTTCCCGACAGAAACAATGAAGGAGGACACCCCTGA
Upstream 100 bases:
>100_bases CACTGGGCAGAGGAGGATGACCGGAACCGGGCCCTCGACGCGGTGGAGAGGAGTATCGCTGCCATTCGGGAAACGGTCTT TCCCGTGATTATCGGAAATT
Downstream 100 bases:
>100_bases CATGCACGCGCAAACGAAAGACCTCACCCCCATCAAGGGAATTCGCTACTATTACCCACCCGATGATGCCGTTCTGGTTT TCAAGGACGAGAAGGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPRLPGNSALVDAAGRVLHSLREINFLSQVERERFYVGILPPRLFAYLGISPQTLCGADGLRRIKVIAPEGIGIARIEVK AHPADTDTAFFLELADTHYGQMELSFCIIADPETPRYYVDKDAAGRDNCFTTLGRNIPEELRAMEAGLFPNQTRRGLHLF GEFFPIFERFVDSLGMEMIVAEPLTYDNAIRYEKYGFDYITGKRLMLEIDQEFRRGGILFGRLDGSNPFRMPGAERTVRG RSWAIHDGIMDEPWDEVRIYKTVGEHAGIDTFPDRNNEGGHP
Sequences:
>Translated_282_residues MPRLPGNSALVDAAGRVLHSLREINFLSQVERERFYVGILPPRLFAYLGISPQTLCGADGLRRIKVIAPEGIGIARIEVK AHPADTDTAFFLELADTHYGQMELSFCIIADPETPRYYVDKDAAGRDNCFTTLGRNIPEELRAMEAGLFPNQTRRGLHLF GEFFPIFERFVDSLGMEMIVAEPLTYDNAIRYEKYGFDYITGKRLMLEIDQEFRRGGILFGRLDGSNPFRMPGAERTVRG RSWAIHDGIMDEPWDEVRIYKTVGEHAGIDTFPDRNNEGGHP >Mature_281_residues PRLPGNSALVDAAGRVLHSLREINFLSQVERERFYVGILPPRLFAYLGISPQTLCGADGLRRIKVIAPEGIGIARIEVKA HPADTDTAFFLELADTHYGQMELSFCIIADPETPRYYVDKDAAGRDNCFTTLGRNIPEELRAMEAGLFPNQTRRGLHLFG EFFPIFERFVDSLGMEMIVAEPLTYDNAIRYEKYGFDYITGKRLMLEIDQEFRRGGILFGRLDGSNPFRMPGAERTVRGR SWAIHDGIMDEPWDEVRIYKTVGEHAGIDTFPDRNNEGGHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31932; Mature: 31801
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPGNSALVDAAGRVLHSLREINFLSQVERERFYVGILPPRLFAYLGISPQTLCGADG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCHHHHCCCC LRRIKVIAPEGIGIARIEVKAHPADTDTAFFLELADTHYGQMELSFCIIADPETPRYYVD CEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEEC KDAAGRDNCFTTLGRNIPEELRAMEAGLFPNQTRRGLHLFGEFFPIFERFVDSLGMEMIV CCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEPLTYDNAIRYEKYGFDYITGKRLMLEIDQEFRRGGILFGRLDGSNPFRMPGAERTVRG ECCCCCCCCEEEHHCCCEEECCCEEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCC RSWAIHDGIMDEPWDEVRIYKTVGEHAGIDTFPDRNNEGGHP CCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PRLPGNSALVDAAGRVLHSLREINFLSQVERERFYVGILPPRLFAYLGISPQTLCGADG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCHHHHCCCC LRRIKVIAPEGIGIARIEVKAHPADTDTAFFLELADTHYGQMELSFCIIADPETPRYYVD CEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEEC KDAAGRDNCFTTLGRNIPEELRAMEAGLFPNQTRRGLHLFGEFFPIFERFVDSLGMEMIV CCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEPLTYDNAIRYEKYGFDYITGKRLMLEIDQEFRRGGILFGRLDGSNPFRMPGAERTVRG ECCCCCCCCEEEHHCCCEEECCCEEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCC RSWAIHDGIMDEPWDEVRIYKTVGEHAGIDTFPDRNNEGGHP CCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA