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The map label for this gene is fadF [H]

Identifier: 78222923

GI number: 78222923

Start: 1925957

End: 1927972

Strand: Reverse

Name: fadF [H]

Synonym: Gmet_1714

Alternate gene names: 78222923

Gene position: 1927972-1925957 (Counterclockwise)

Preceding gene: 78222924

Following gene: 78222922

Centisome position: 48.23

GC content: 63.44

Gene sequence:

>2016_bases
ATGGAAGCCACCCGCGAAATCTATTGGAACATCGGCCACGGGGTCGTGATCCCCATGTACCTCCTCACCTTTGCCGCCTT
CGGCATCCTGGCGTGGGGATTCTGGAAGCGTCTCCCCGTCTGGCGCCAAGGGAAGCCCCTCGACCGCTTCGACCGCTACG
ACGAGCGGGTGAAGCGCCTCGTCTTGACGGTACTGAGTCAGTGCAAGGTTGCCCGGGTCAAGGACGGCGGCATTCCCCAC
GCCCTCTTCTTCTGGGGATTCCTCACCCTCTTTGCCGGAACGCTGATCGTGATGCTCCAGGCCGATTTCATCACCCCCCT
CATGGACGTGAACATCCTCAGGGGGGAGTTCTACAAGGCCTTCTCCCTAGTGCTGGATCTGGCGGGCCTCGGTGCTATCG
TGATGCTGGCCGGCCTCTCTATCCGCCGCTTCGTGCTGAAGCCCGACGGCCTTGAGACCGTCAACGACGACCGGATCATC
CACCAACTCCTCTTCGCCATCCTCATCACCGGCTTCTGCGTCGAAGGGGCGCGGATGGCCGCCACGGAGCTGCAGCAGAA
TCCCGAGCTGGCCCGCTTCTCCCCGGTGGGATACCTCTTTGCCCACCTCTTCAAGGCCTACACCGACGACTCCATCCGCA
CCATGCACACGGTCCTCTGGTGGACCCACTTCGGCCTCGTGCTCGGCTTCATCGCCGCCCTCCCCTACACGAAGCTGCGC
CACATCCTGACCACCAGCATCAACTCCTTCTTCGCTCCCCTGGATGAAAAGGGAACCATCGGCACCCTCAACATGGAGGA
CGAAAGCCAGGAACAGTTCGGCGCCACCAAGGTGACGGACCTCACCTGGAAGGACATCTTCGACGCCGACGCCTGCACGA
GCTGCAAGCGGTGCCAGGACCGCTGCCCCGCCTGGGCCACTGAGAAGCCCCTCTCCCCCATGAAAGTGGTGAAGCAGGTG
TGCGAGGCTGCCTGGAGCGCCCCTGACTCATCACTGGTGGAAACCGTCACCGCCGATGTCCTCTGGAGCTGCACCACCTG
CCGTGCCTGCCAGGATGTGTGTCCGGCCGAGATCGAGCACGTGAACAAGATCCTCGAGATGCGACGCAGCCTCTCCCTCA
TGGAGGGGGAATTCCCCGGCGACGAGGTCCGCACCGCAGTCAGCAACGTGGAGGTGAACGGCAACCCCTTCGGCCTCGCC
TATGCCAGCCGGGGCGACTGGGCTGAGGGGCTCCCCGTGGCCCGGGTCTCCGAGGGGGAGGAGGCCGACATCCTCTATTT
TGCCGGCTGTTACGCCTCCTTCGACAAGCGGAACCGGGAGGTGGCCCGCAGCTTCGTGAAGATCTGCGCCGCCGCCGGCA
TCCGGGTCGGCATCCTCGGCAAGGATGAGAAGTGCTGCGGCGAGCCGGTCAGGAAGCTCGGCAACGAGTACCTCTACCAG
ATGATGGCCCAGGAGAACATAGAGATGATGAAAGCCAGCGGGGCAAAGAAGGTGGTCACCACCTGCCCCCACTGCTTCAA
CACTCTCTCCCGCGATTACCGTGACCTGGGCTTCGAGCTGGAAACCGAGCACTACGCCACCTTCATCCACAACCTCATGG
AGAGCGGGCGTCTTTCGCTTGCCCCCGAACAGAAACGCTTCCCCTTCACCTACCACGATTCCTGCTATCTGGGGCGCTAC
AAGGACATCTTCGCCGAGCCCCGGGCCGTCCTGGCGGCTGCCGGCGGCGACCTGCGGGAAATGGACCGCTCTGGATGCGA
CAGCTTCTGCTGCGGCGCCGGAGGCGGACGGATCCTGGCCGAGGAGAAGCTCGGCACCAAGATCAGCGAGGCCCGGGTCC
GGATGGCCGGGGAGACCGGCGCCCAGCTCCTGGTTTCCAACTGCCCCTTCTGCCTCACCATGTTCGAGGACGGAATCAAG
ACTGGCGGTTTCGAGGAGAGCATCAAGGTGCGGGATCTGGCGGAAATCGTGGCTGAGAGAATAGAGAACGCGGCTTTTCC
GCAATCTCTGCGTTGA

Upstream 100 bases:

>100_bases
GGGGACCAACGAGGTGCAGCGGGTGGTTATCTCGAAGCTGCTGTTGAGCTGACAGGACAAGACTAAAAGCTTCAAGGCTG
GAAAGGAATAAGGAGGCATC

Downstream 100 bases:

>100_bases
TCTTCGGGATTGCTTGTGCGACGTAGCGCTGCTACGCCTCCGCGCAATCCCTCGATCGCCTTGACCTTGCGAAAAATCCA
CGTTCTCAAAAGGACATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MEATREIYWNIGHGVVIPMYLLTFAAFGILAWGFWKRLPVWRQGKPLDRFDRYDERVKRLVLTVLSQCKVARVKDGGIPH
ALFFWGFLTLFAGTLIVMLQADFITPLMDVNILRGEFYKAFSLVLDLAGLGAIVMLAGLSIRRFVLKPDGLETVNDDRII
HQLLFAILITGFCVEGARMAATELQQNPELARFSPVGYLFAHLFKAYTDDSIRTMHTVLWWTHFGLVLGFIAALPYTKLR
HILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDADACTSCKRCQDRCPAWATEKPLSPMKVVKQV
CEAAWSAPDSSLVETVTADVLWSCTTCRACQDVCPAEIEHVNKILEMRRSLSLMEGEFPGDEVRTAVSNVEVNGNPFGLA
YASRGDWAEGLPVARVSEGEEADILYFAGCYASFDKRNREVARSFVKICAAAGIRVGILGKDEKCCGEPVRKLGNEYLYQ
MMAQENIEMMKASGAKKVVTTCPHCFNTLSRDYRDLGFELETEHYATFIHNLMESGRLSLAPEQKRFPFTYHDSCYLGRY
KDIFAEPRAVLAAAGGDLREMDRSGCDSFCCGAGGGRILAEEKLGTKISEARVRMAGETGAQLLVSNCPFCLTMFEDGIK
TGGFEESIKVRDLAEIVAERIENAAFPQSLR

Sequences:

>Translated_671_residues
MEATREIYWNIGHGVVIPMYLLTFAAFGILAWGFWKRLPVWRQGKPLDRFDRYDERVKRLVLTVLSQCKVARVKDGGIPH
ALFFWGFLTLFAGTLIVMLQADFITPLMDVNILRGEFYKAFSLVLDLAGLGAIVMLAGLSIRRFVLKPDGLETVNDDRII
HQLLFAILITGFCVEGARMAATELQQNPELARFSPVGYLFAHLFKAYTDDSIRTMHTVLWWTHFGLVLGFIAALPYTKLR
HILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDADACTSCKRCQDRCPAWATEKPLSPMKVVKQV
CEAAWSAPDSSLVETVTADVLWSCTTCRACQDVCPAEIEHVNKILEMRRSLSLMEGEFPGDEVRTAVSNVEVNGNPFGLA
YASRGDWAEGLPVARVSEGEEADILYFAGCYASFDKRNREVARSFVKICAAAGIRVGILGKDEKCCGEPVRKLGNEYLYQ
MMAQENIEMMKASGAKKVVTTCPHCFNTLSRDYRDLGFELETEHYATFIHNLMESGRLSLAPEQKRFPFTYHDSCYLGRY
KDIFAEPRAVLAAAGGDLREMDRSGCDSFCCGAGGGRILAEEKLGTKISEARVRMAGETGAQLLVSNCPFCLTMFEDGIK
TGGFEESIKVRDLAEIVAERIENAAFPQSLR
>Mature_671_residues
MEATREIYWNIGHGVVIPMYLLTFAAFGILAWGFWKRLPVWRQGKPLDRFDRYDERVKRLVLTVLSQCKVARVKDGGIPH
ALFFWGFLTLFAGTLIVMLQADFITPLMDVNILRGEFYKAFSLVLDLAGLGAIVMLAGLSIRRFVLKPDGLETVNDDRII
HQLLFAILITGFCVEGARMAATELQQNPELARFSPVGYLFAHLFKAYTDDSIRTMHTVLWWTHFGLVLGFIAALPYTKLR
HILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDADACTSCKRCQDRCPAWATEKPLSPMKVVKQV
CEAAWSAPDSSLVETVTADVLWSCTTCRACQDVCPAEIEHVNKILEMRRSLSLMEGEFPGDEVRTAVSNVEVNGNPFGLA
YASRGDWAEGLPVARVSEGEEADILYFAGCYASFDKRNREVARSFVKICAAAGIRVGILGKDEKCCGEPVRKLGNEYLYQ
MMAQENIEMMKASGAKKVVTTCPHCFNTLSRDYRDLGFELETEHYATFIHNLMESGRLSLAPEQKRFPFTYHDSCYLGRY
KDIFAEPRAVLAAAGGDLREMDRSGCDSFCCGAGGGRILAEEKLGTKISEARVRMAGETGAQLLVSNCPFCLTMFEDGIK
TGGFEESIKVRDLAEIVAERIENAAFPQSLR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 74903; Mature: 74903

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATREIYWNIGHGVVIPMYLLTFAAFGILAWGFWKRLPVWRQGKPLDRFDRYDERVKRL
CCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VLTVLSQCKVARVKDGGIPHALFFWGFLTLFAGTLIVMLQADFITPLMDVNILRGEFYKA
HHHHHHHHHEEHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLVLDLAGLGAIVMLAGLSIRRFVLKPDGLETVNDDRIIHQLLFAILITGFCVEGARMA
HHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ATELQQNPELARFSPVGYLFAHLFKAYTDDSIRTMHTVLWWTHFGLVLGFIAALPYTKLR
HHHHHCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDADACTSCKRCQD
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHH
RCPAWATEKPLSPMKVVKQVCEAAWSAPDSSLVETVTADVLWSCTTCRACQDVCPAEIEH
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VNKILEMRRSLSLMEGEFPGDEVRTAVSNVEVNGNPFGLAYASRGDWAEGLPVARVSEGE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
EADILYFAGCYASFDKRNREVARSFVKICAAAGIRVGILGKDEKCCGEPVRKLGNEYLYQ
CCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MMAQENIEMMKASGAKKVVTTCPHCFNTLSRDYRDLGFELETEHYATFIHNLMESGRLSL
HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCC
APEQKRFPFTYHDSCYLGRYKDIFAEPRAVLAAAGGDLREMDRSGCDSFCCGAGGGRILA
CCCCCCCCEEECCCCHHCHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEE
EEKLGTKISEARVRMAGETGAQLLVSNCPFCLTMFEDGIKTGGFEESIKVRDLAEIVAER
HHHHCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IENAAFPQSLR
HHHCCCCCCCC
>Mature Secondary Structure
MEATREIYWNIGHGVVIPMYLLTFAAFGILAWGFWKRLPVWRQGKPLDRFDRYDERVKRL
CCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VLTVLSQCKVARVKDGGIPHALFFWGFLTLFAGTLIVMLQADFITPLMDVNILRGEFYKA
HHHHHHHHHEEHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLVLDLAGLGAIVMLAGLSIRRFVLKPDGLETVNDDRIIHQLLFAILITGFCVEGARMA
HHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ATELQQNPELARFSPVGYLFAHLFKAYTDDSIRTMHTVLWWTHFGLVLGFIAALPYTKLR
HHHHHCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HILTTSINSFFAPLDEKGTIGTLNMEDESQEQFGATKVTDLTWKDIFDADACTSCKRCQD
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHH
RCPAWATEKPLSPMKVVKQVCEAAWSAPDSSLVETVTADVLWSCTTCRACQDVCPAEIEH
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VNKILEMRRSLSLMEGEFPGDEVRTAVSNVEVNGNPFGLAYASRGDWAEGLPVARVSEGE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
EADILYFAGCYASFDKRNREVARSFVKICAAAGIRVGILGKDEKCCGEPVRKLGNEYLYQ
CCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MMAQENIEMMKASGAKKVVTTCPHCFNTLSRDYRDLGFELETEHYATFIHNLMESGRLSL
HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCC
APEQKRFPFTYHDSCYLGRYKDIFAEPRAVLAAAGGDLREMDRSGCDSFCCGAGGGRILA
CCCCCCCCEEECCCCHHCHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEE
EEKLGTKISEARVRMAGETGAQLLVSNCPFCLTMFEDGIKTGGFEESIKVRDLAEIVAER
HHHHCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IENAAFPQSLR
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]