Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 78222922

GI number: 78222922

Start: 1925070

End: 1925846

Strand: Reverse

Name: etfB [H]

Synonym: Gmet_1713

Alternate gene names: 78222922

Gene position: 1925846-1925070 (Counterclockwise)

Preceding gene: 78222923

Following gene: 78222921

Centisome position: 48.18

GC content: 63.32

Gene sequence:

>777_bases
ATGAAAATTCTCGTCTGCGTCAAACAGGTTCCCGACATGGAATCCCGCTTCAAGCCCGATGGCAGCGGCACCTGGTTCGA
GGAGACCGATCTGGCCTTCCGGATGAACGAGTACGACGAATATGCCGTGGAACAGGCGGTGCAGCTCAAGGAGCAACTGG
GGAACGAGCCGGAGGTGACAGTCCTCTCTATCGGCCCGGACCGGGTGAACGAGGCCATCAAGAAGGCCCTCGCCATGGGG
TGTGACAAGGGAGCCCACATCCAGGACCCCGCCCCCCAGGGGAAGGATCCGTGGCAGATCGCGTCGATCATCGCCCAATA
CGCCCGCACCGAGGGATTCGACCTCGTCTTCACCGGCATGCAGTCCCAGGACCGCGGCTCGGCCCAGGTGGGGGTGCTGG
TGGCGGAACTCTTGGGCTTTGCCTGTGCCACGACCCTCGTGGGCTTCGCCTTCGCCGACGGCGTGGTGACCGCCAAGCGC
GAGCTTGAAGGGGGAATCAAGGGGGTTGCGAAGCTGCGGCTTCCGGCCGTCGTCACCTGCCAACTGGGCCTCAACATCCC
CCGCTACCCCACCCTTCCCAACATCATGAAGGCCAAGAAGAAAGAGATCCTCGCCATCCCTGTGGCCGACCTGCTGAAGG
AAGAGGCCGTCGCCGCCACGGCCCGGTTCTACCCTCCGGCCAGGAAGGGAGGCGGAATCGTGCTGGAAGGTGATGTGGGG
AACCTGGTGGAGCAGCTCTACGGGATCCTGAAAGAAAAAACGACCGTGCTCCGGTAG

Upstream 100 bases:

>100_bases
TGCTTGTGCGACGTAGCGCTGCTACGCCTCCGCGCAATCCCTCGATCGCCTTGACCTTGCGAAAAATCCACGTTCTCAAA
AGGACATTAAGGAGGTTCCC

Downstream 100 bases:

>100_bases
GAGGAGAAACCATATGAAAGCACTGCTTGTCTGCGAATATCGCGAAGGAAAACTCCTCGATACAACCTACGAACTCCTCG
CCTTTGCCGACCGCATCGGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKILVCVKQVPDMESRFKPDGSGTWFEETDLAFRMNEYDEYAVEQAVQLKEQLGNEPEVTVLSIGPDRVNEAIKKALAMG
CDKGAHIQDPAPQGKDPWQIASIIAQYARTEGFDLVFTGMQSQDRGSAQVGVLVAELLGFACATTLVGFAFADGVVTAKR
ELEGGIKGVAKLRLPAVVTCQLGLNIPRYPTLPNIMKAKKKEILAIPVADLLKEEAVAATARFYPPARKGGGIVLEGDVG
NLVEQLYGILKEKTTVLR

Sequences:

>Translated_258_residues
MKILVCVKQVPDMESRFKPDGSGTWFEETDLAFRMNEYDEYAVEQAVQLKEQLGNEPEVTVLSIGPDRVNEAIKKALAMG
CDKGAHIQDPAPQGKDPWQIASIIAQYARTEGFDLVFTGMQSQDRGSAQVGVLVAELLGFACATTLVGFAFADGVVTAKR
ELEGGIKGVAKLRLPAVVTCQLGLNIPRYPTLPNIMKAKKKEILAIPVADLLKEEAVAATARFYPPARKGGGIVLEGDVG
NLVEQLYGILKEKTTVLR
>Mature_258_residues
MKILVCVKQVPDMESRFKPDGSGTWFEETDLAFRMNEYDEYAVEQAVQLKEQLGNEPEVTVLSIGPDRVNEAIKKALAMG
CDKGAHIQDPAPQGKDPWQIASIIAQYARTEGFDLVFTGMQSQDRGSAQVGVLVAELLGFACATTLVGFAFADGVVTAKR
ELEGGIKGVAKLRLPAVVTCQLGLNIPRYPTLPNIMKAKKKEILAIPVADLLKEEAVAATARFYPPARKGGGIVLEGDVG
NLVEQLYGILKEKTTVLR

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=242, Percent_Identity=39.2561983471074, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI62420877, Length=224, Percent_Identity=38.8392857142857, Blast_Score=129, Evalue=4e-30,
Organism=Escherichia coli, GI87081682, Length=249, Percent_Identity=32.9317269076305, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367123, Length=258, Percent_Identity=25.968992248062, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082158, Length=214, Percent_Identity=27.1028037383178, Blast_Score=68, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=257, Percent_Identity=40.0778210116732, Blast_Score=133, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6321646, Length=251, Percent_Identity=32.6693227091633, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=37.8486055776892, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=37.8486055776892, Blast_Score=132, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27962; Mature: 27962

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVCVKQVPDMESRFKPDGSGTWFEETDLAFRMNEYDEYAVEQAVQLKEQLGNEPEVT
CEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEE
VLSIGPDRVNEAIKKALAMGCDKGAHIQDPAPQGKDPWQIASIIAQYARTEGFDLVFTGM
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
QSQDRGSAQVGVLVAELLGFACATTLVGFAFADGVVTAKRELEGGIKGVAKLRLPAVVTC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE
QLGLNIPRYPTLPNIMKAKKKEILAIPVADLLKEEAVAATARFYPPARKGGGIVLEGDVG
EECCCCCCCCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH
NLVEQLYGILKEKTTVLR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILVCVKQVPDMESRFKPDGSGTWFEETDLAFRMNEYDEYAVEQAVQLKEQLGNEPEVT
CEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEE
VLSIGPDRVNEAIKKALAMGCDKGAHIQDPAPQGKDPWQIASIIAQYARTEGFDLVFTGM
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
QSQDRGSAQVGVLVAELLGFACATTLVGFAFADGVVTAKRELEGGIKGVAKLRLPAVVTC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE
QLGLNIPRYPTLPNIMKAKKKEILAIPVADLLKEEAVAATARFYPPARKGGGIVLEGDVG
EECCCCCCCCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH
NLVEQLYGILKEKTTVLR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]