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The map label for this gene is 78222910

Identifier: 78222910

GI number: 78222910

Start: 1908780

End: 1910189

Strand: Direct

Name: 78222910

Synonym: Gmet_1701

Alternate gene names: NA

Gene position: 1908780-1910189 (Clockwise)

Preceding gene: 78222909

Following gene: 78222912

Centisome position: 47.75

GC content: 64.96

Gene sequence:

>1410_bases
ATGAATATCCTGCTTCTTCGCCCCCATCCAGGGAGTGATGCCTTTGGCCTCGGCCCCTTCTTCCGGGTCGAGCCGCTGGG
TCTTGAATACCTGGGGGCCGCCCTGCTTGCTCGGGGGCACGCTGTCACCATCGCCGACCTCCGTTTTCGCCCCGGCGCCT
CCACCTGGGTCCGCCGCAGCCAGCCGCGGTTAGTGGGGATCACCTGTCTCCATGCCCTGGAATATGACCGGATCATTGCC
ACGGCCCGCGAGGTGCGGCGGGTTTCGCCGGACGCCTTCATCCTTGTCGGCGGCCATGCCGCGGCGGCGTTCCCCGATCC
GCTCAAAGACAATGTCATCGATGCCATCTGCCTGGACGACGGCGAGGAGATCATCACCGCCCTCGCGGAGGCTCTGGAAA
CGGGACGGCCTCTGACCGACATCCCGGCCCTGCTGTTCAGGACAGGGGACGGCTGGGTGGAAACTCCCCCTCTATCCGAT
CAGACCTGCCTCGACCTGGTCCCGCTCCCGGCGCGGCACCTCGTGGACCGGCACCGCAACAACTACCACTGTCTCCTCTT
TAAGCCGGTCTGGCTCATCGAGACCGCCCGGGGGTGCCCCCACCGCTGCTCCTTCTGCTCCGTCTGGCAGCTCTATGGCC
GGTCGGTGCGCGAGCGGAGCATCGCCACGGTGGTGGAGGACTTCGCCACTGCCGGTGATTCCATCTTCGTGGCCGACGAC
CTCTTCTGGTACAACCGGGAACGGAGCATCGAGCTTGCCGAGGCGCTGAAAAAGCGGGGAGTCCACAAGCGCTGGATCCT
CGTTCAGACCCGCACCGACCTCATATGCCGGAGCGCCGACATCATGGCGGCCTGGCGTCCCCTGGCCAAGGACTTCGACA
TCTTCCTGGGGCTTGAGGCGGCCAGTGACAAGGGCCTTTCCGGTCTCGACAAGGACGCGGGGCTTGCGGAGAGCATCGAA
GGGGTCAGGATCGCCCGGGAACTCAAGTACGGCATCAACGGCAACTTCCTCGTGGGCCACGACTGGGGCGAGGAAGAATT
CCGCGAACTCTGGGACTTCGTGGCCCAGTACGGCCTGCAGCGGGCCGGCTTCACCATCCATACCCCGCTGCCGGGGACCG
ACCACTACCGCGAGATGAAACCGCGGATCCCCGACCAGCCCTGGTCCAACTTCGACATGCACCATCTCCTCTGGGAGCCG
CGCATCGGCGCGAAGCGGTTCTTCGAGCTTTACGCCGAAACCTGGCGCCGCTCGATCCTCAATACCTCCGGCGAGAAGAG
TATCGTCGACTGGATGCGTCAGGTCCGACCGAGCCAGATTCCGTACATTGCCCGGGTGCTCTGGCGCACCCAGCGGATGA
TGAAGCCTGCGGCCTATTTGAAGGAGTATGAGGCGACGCGGCCAAGGTAG

Upstream 100 bases:

>100_bases
AAGGGAAGGGGAAGCTGGTCAACCTGGCCTACAATTTCCTCCGGCGCGGAGGGATCGAACGGCCGGACCGAATCGTCCAC
ATACGCGAGGTTGCTGAACC

Downstream 100 bases:

>100_bases
AAGGGAACGGTAAGGGCGGGATGACATGAAAAAGGAGGAGGTGCTCAAGGCATCTCCCCCTTTTTGTGTTCAGTGCAGGT
GGTTGTCAATACAGCTTTTC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNILLLRPHPGSDAFGLGPFFRVEPLGLEYLGAALLARGHAVTIADLRFRPGASTWVRRSQPRLVGITCLHALEYDRIIA
TAREVRRVSPDAFILVGGHAAAAFPDPLKDNVIDAICLDDGEEIITALAEALETGRPLTDIPALLFRTGDGWVETPPLSD
QTCLDLVPLPARHLVDRHRNNYHCLLFKPVWLIETARGCPHRCSFCSVWQLYGRSVRERSIATVVEDFATAGDSIFVADD
LFWYNRERSIELAEALKKRGVHKRWILVQTRTDLICRSADIMAAWRPLAKDFDIFLGLEAASDKGLSGLDKDAGLAESIE
GVRIARELKYGINGNFLVGHDWGEEEFRELWDFVAQYGLQRAGFTIHTPLPGTDHYREMKPRIPDQPWSNFDMHHLLWEP
RIGAKRFFELYAETWRRSILNTSGEKSIVDWMRQVRPSQIPYIARVLWRTQRMMKPAAYLKEYEATRPR

Sequences:

>Translated_469_residues
MNILLLRPHPGSDAFGLGPFFRVEPLGLEYLGAALLARGHAVTIADLRFRPGASTWVRRSQPRLVGITCLHALEYDRIIA
TAREVRRVSPDAFILVGGHAAAAFPDPLKDNVIDAICLDDGEEIITALAEALETGRPLTDIPALLFRTGDGWVETPPLSD
QTCLDLVPLPARHLVDRHRNNYHCLLFKPVWLIETARGCPHRCSFCSVWQLYGRSVRERSIATVVEDFATAGDSIFVADD
LFWYNRERSIELAEALKKRGVHKRWILVQTRTDLICRSADIMAAWRPLAKDFDIFLGLEAASDKGLSGLDKDAGLAESIE
GVRIARELKYGINGNFLVGHDWGEEEFRELWDFVAQYGLQRAGFTIHTPLPGTDHYREMKPRIPDQPWSNFDMHHLLWEP
RIGAKRFFELYAETWRRSILNTSGEKSIVDWMRQVRPSQIPYIARVLWRTQRMMKPAAYLKEYEATRPR
>Mature_469_residues
MNILLLRPHPGSDAFGLGPFFRVEPLGLEYLGAALLARGHAVTIADLRFRPGASTWVRRSQPRLVGITCLHALEYDRIIA
TAREVRRVSPDAFILVGGHAAAAFPDPLKDNVIDAICLDDGEEIITALAEALETGRPLTDIPALLFRTGDGWVETPPLSD
QTCLDLVPLPARHLVDRHRNNYHCLLFKPVWLIETARGCPHRCSFCSVWQLYGRSVRERSIATVVEDFATAGDSIFVADD
LFWYNRERSIELAEALKKRGVHKRWILVQTRTDLICRSADIMAAWRPLAKDFDIFLGLEAASDKGLSGLDKDAGLAESIE
GVRIARELKYGINGNFLVGHDWGEEEFRELWDFVAQYGLQRAGFTIHTPLPGTDHYREMKPRIPDQPWSNFDMHHLLWEP
RIGAKRFFELYAETWRRSILNTSGEKSIVDWMRQVRPSQIPYIARVLWRTQRMMKPAAYLKEYEATRPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53420; Mature: 53420

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLLRPHPGSDAFGLGPFFRVEPLGLEYLGAALLARGHAVTIADLRFRPGASTWVRRS
CEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHCC
QPRLVGITCLHALEYDRIIATAREVRRVSPDAFILVGGHAAAAFPDPLKDNVIDAICLDD
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCEEEEECCC
GEEIITALAEALETGRPLTDIPALLFRTGDGWVETPPLSDQTCLDLVPLPARHLVDRHRN
CHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCEECCCCCCCCHHHHCCCCHHHHHHHCCC
NYHCLLFKPVWLIETARGCPHRCSFCSVWQLYGRSVRERSIATVVEDFATAGDSIFVADD
CEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
LFWYNRERSIELAEALKKRGVHKRWILVQTRTDLICRSADIMAAWRPLAKDFDIFLGLEA
CEEECCCCCHHHHHHHHHCCCCEEEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEEEEC
ASDKGLSGLDKDAGLAESIEGVRIARELKYGINGNFLVGHDWGEEEFRELWDFVAQYGLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCHH
RAGFTIHTPLPGTDHYREMKPRIPDQPWSNFDMHHLLWEPRIGAKRFFELYAETWRRSIL
HCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHH
NTSGEKSIVDWMRQVRPSQIPYIARVLWRTQRMMKPAAYLKEYEATRPR
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNILLLRPHPGSDAFGLGPFFRVEPLGLEYLGAALLARGHAVTIADLRFRPGASTWVRRS
CEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHCC
QPRLVGITCLHALEYDRIIATAREVRRVSPDAFILVGGHAAAAFPDPLKDNVIDAICLDD
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCEEEEECCC
GEEIITALAEALETGRPLTDIPALLFRTGDGWVETPPLSDQTCLDLVPLPARHLVDRHRN
CHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCEECCCCCCCCHHHHCCCCHHHHHHHCCC
NYHCLLFKPVWLIETARGCPHRCSFCSVWQLYGRSVRERSIATVVEDFATAGDSIFVADD
CEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
LFWYNRERSIELAEALKKRGVHKRWILVQTRTDLICRSADIMAAWRPLAKDFDIFLGLEA
CEEECCCCCHHHHHHHHHCCCCEEEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEEEEC
ASDKGLSGLDKDAGLAESIEGVRIARELKYGINGNFLVGHDWGEEEFRELWDFVAQYGLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCHH
RAGFTIHTPLPGTDHYREMKPRIPDQPWSNFDMHHLLWEPRIGAKRFFELYAETWRRSIL
HCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHH
NTSGEKSIVDWMRQVRPSQIPYIARVLWRTQRMMKPAAYLKEYEATRPR
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]