| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222912
Identifier: 78222912
GI number: 78222912
Start: 1911407
End: 1912870
Strand: Direct
Name: 78222912
Synonym: Gmet_1703
Alternate gene names: NA
Gene position: 1911407-1912870 (Clockwise)
Preceding gene: 78222910
Following gene: 78222915
Centisome position: 47.82
GC content: 53.62
Gene sequence:
>1464_bases ATGCAAAAGAAAAAGATTTTGGTTGTAAGTCTCGTGGTCTGCGCAGTTGTAACTCTTGTATTCTTGTCGCTACCTAAAAA AGGTGTGACCGCCACAAACACCGGCTGGAAAGTAATGGTCAGCAATGATCTCGGTATTCATTGCACCTGTCCGGATTCAT CTCTCATCTCAATACTTCCACCAGCCAACACACTTCGGGCACAGGTTTTCAACGGTTCAGAAATAGTTACTGATCCTGCC AAGATCAGGGTCGAGTATTCGGTGCCATTTGCTGACCAGTTGATGACGGACCCCCAGTATCTGACCTACCTCGACAACGC CAACAAGATGTATCCGACCCAGGAAGGCTGGGCCAAGGTGAGCCGGACAAATCCGGTTTCCATAGTCGGCACTCCCCTGA AATCGGGCAAATTTGTCTCCAAGCCCGAACACAATATGTGGGTGGCTGAACTTATTCCGGTTTTCCCTCCGAAACAGCCA GCAGGAGGTGAAGGAACGTTCAAGGATGCCTTTGGCGATATCCGCCAGGCATTCCCCAAAGTAACCGTTACGGTAAAGGA CGCGGTGACCGGCGCAGTGCTCGCCCAGAATACCAACACAACAACTCCTGTGGCCTTTGCCAACTGCTGCACCTGCCACA GGGAGATTTACAAGGATAAGTTTGGACAGTATCCGGCGAATCCGCTCGACAGTTTCCGTCAGACCATGCTCGCGCCCCAT GATCTCAAGCACAACACAGACCTACTGAAACTTACCCAAGCCGGGATTCCGGTGCGGTGCAGCCGTTGTCACATGGATCC CGCTGTCGGTGGAAAAACTCCCGGATATCCGCTGAGCCTTTACCCGGCGGCAGCGGGGCTCAGACTTCCGATCCCCGCCA AGACGATGACCCTGAGTATGGCGCTCCACCAGGGACACAATCTGAAAAACGAATTCCACACCCGCTATGCAGCGCTAGGG TTCAAGGAATCCTGCGAAGCCTGTCATCCCGGCAAGGAAACAGTGGGGTGCATGCGTGGCCTCCACGTGAATATGACAAC CGCAAGTGGCAAGAAGCTTGATTTCAACTGCTCGGATTGTCACGGAGATCTCAATATGCGGTTTGCAACCGGGCAACTCC TGGACCCTTGGTCGTACCGGACATTGCCGAGGTGTTCCAACTGCCACAAGAGCAACATTGGGGAGTGGACCAACGCGCAG ATCGAGAAGTACGGAAAGATCCAGTTCGGCGGCGCGTACCTGAATAGCCGCGGGCACGCGGACAACAAGATCCTGTGTAC TTCGTGTCACGGGTCACCCCATGCTGAGATTCCTTCCAAGATTTCCTGGGAAAACATATTTTATTCGACCTTCAATGGCG GCAAAGCAGCACCTCTCGGGAAGTGCTACGGTTGTCACACCGACGCTGGTTACAGCGGATGGGGCAGACCTCCCCATGGC ATGTCCGATAACCTTGCTCCTTAA
Upstream 100 bases:
>100_bases GGAAAACCCACAGGGTCTCCCTGAGACAGCCGGGTTGCCGAAATATCAATTGATATATATGGCAACCCGGCTGTTTTATT ACCATCAGGGAGGTAGAAGT
Downstream 100 bases:
>100_bases TAGTTCTAACTCGTGACGCAAGACTAAGTACTAAAACTGAAAAAGCATGAGTTCCATCAGGAATTCATGCTTTTTCAGTT TAGAACCCAACCGATTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MQKKKILVVSLVVCAVVTLVFLSLPKKGVTATNTGWKVMVSNDLGIHCTCPDSSLISILPPANTLRAQVFNGSEIVTDPA KIRVEYSVPFADQLMTDPQYLTYLDNANKMYPTQEGWAKVSRTNPVSIVGTPLKSGKFVSKPEHNMWVAELIPVFPPKQP AGGEGTFKDAFGDIRQAFPKVTVTVKDAVTGAVLAQNTNTTTPVAFANCCTCHREIYKDKFGQYPANPLDSFRQTMLAPH DLKHNTDLLKLTQAGIPVRCSRCHMDPAVGGKTPGYPLSLYPAAAGLRLPIPAKTMTLSMALHQGHNLKNEFHTRYAALG FKESCEACHPGKETVGCMRGLHVNMTTASGKKLDFNCSDCHGDLNMRFATGQLLDPWSYRTLPRCSNCHKSNIGEWTNAQ IEKYGKIQFGGAYLNSRGHADNKILCTSCHGSPHAEIPSKISWENIFYSTFNGGKAAPLGKCYGCHTDAGYSGWGRPPHG MSDNLAP
Sequences:
>Translated_487_residues MQKKKILVVSLVVCAVVTLVFLSLPKKGVTATNTGWKVMVSNDLGIHCTCPDSSLISILPPANTLRAQVFNGSEIVTDPA KIRVEYSVPFADQLMTDPQYLTYLDNANKMYPTQEGWAKVSRTNPVSIVGTPLKSGKFVSKPEHNMWVAELIPVFPPKQP AGGEGTFKDAFGDIRQAFPKVTVTVKDAVTGAVLAQNTNTTTPVAFANCCTCHREIYKDKFGQYPANPLDSFRQTMLAPH DLKHNTDLLKLTQAGIPVRCSRCHMDPAVGGKTPGYPLSLYPAAAGLRLPIPAKTMTLSMALHQGHNLKNEFHTRYAALG FKESCEACHPGKETVGCMRGLHVNMTTASGKKLDFNCSDCHGDLNMRFATGQLLDPWSYRTLPRCSNCHKSNIGEWTNAQ IEKYGKIQFGGAYLNSRGHADNKILCTSCHGSPHAEIPSKISWENIFYSTFNGGKAAPLGKCYGCHTDAGYSGWGRPPHG MSDNLAP >Mature_487_residues MQKKKILVVSLVVCAVVTLVFLSLPKKGVTATNTGWKVMVSNDLGIHCTCPDSSLISILPPANTLRAQVFNGSEIVTDPA KIRVEYSVPFADQLMTDPQYLTYLDNANKMYPTQEGWAKVSRTNPVSIVGTPLKSGKFVSKPEHNMWVAELIPVFPPKQP AGGEGTFKDAFGDIRQAFPKVTVTVKDAVTGAVLAQNTNTTTPVAFANCCTCHREIYKDKFGQYPANPLDSFRQTMLAPH DLKHNTDLLKLTQAGIPVRCSRCHMDPAVGGKTPGYPLSLYPAAAGLRLPIPAKTMTLSMALHQGHNLKNEFHTRYAALG FKESCEACHPGKETVGCMRGLHVNMTTASGKKLDFNCSDCHGDLNMRFATGQLLDPWSYRTLPRCSNCHKSNIGEWTNAQ IEKYGKIQFGGAYLNSRGHADNKILCTSCHGSPHAEIPSKISWENIFYSTFNGGKAAPLGKCYGCHTDAGYSGWGRPPHG MSDNLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53092; Mature: 53092
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKKILVVSLVVCAVVTLVFLSLPKKGVTATNTGWKVMVSNDLGIHCTCPDSSLISILP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCEEEEECCCCCEEEEEC PANTLRAQVFNGSEIVTDPAKIRVEYSVPFADQLMTDPQYLTYLDNANKMYPTQEGWAKV CCCCEEEEEECCCEEEECCEEEEEEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH SRTNPVSIVGTPLKSGKFVSKPEHNMWVAELIPVFPPKQPAGGEGTFKDAFGDIRQAFPK CCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC VTVTVKDAVTGAVLAQNTNTTTPVAFANCCTCHREIYKDKFGQYPANPLDSFRQTMLAPH EEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC DLKHNTDLLKLTQAGIPVRCSRCHMDPAVGGKTPGYPLSLYPAAAGLRLPIPAKTMTLSM CCCCCCCEEEEECCCCCEEEHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEE ALHQGHNLKNEFHTRYAALGFKESCEACHPGKETVGCMRGLHVNMTTASGKKLDFNCSDC HHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCEEEEEECCCCEEECCCCCC HGDLNMRFATGQLLDPWSYRTLPRCSNCHKSNIGEWTNAQIEKYGKIQFGGAYLNSRGHA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCEEECCCCCC DNKILCTSCHGSPHAEIPSKISWENIFYSTFNGGKAAPLGKCYGCHTDAGYSGWGRPPHG CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSDNLAP CCCCCCC >Mature Secondary Structure MQKKKILVVSLVVCAVVTLVFLSLPKKGVTATNTGWKVMVSNDLGIHCTCPDSSLISILP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCEEEEECCCCCEEEEEC PANTLRAQVFNGSEIVTDPAKIRVEYSVPFADQLMTDPQYLTYLDNANKMYPTQEGWAKV CCCCEEEEEECCCEEEECCEEEEEEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH SRTNPVSIVGTPLKSGKFVSKPEHNMWVAELIPVFPPKQPAGGEGTFKDAFGDIRQAFPK CCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC VTVTVKDAVTGAVLAQNTNTTTPVAFANCCTCHREIYKDKFGQYPANPLDSFRQTMLAPH EEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC DLKHNTDLLKLTQAGIPVRCSRCHMDPAVGGKTPGYPLSLYPAAAGLRLPIPAKTMTLSM CCCCCCCEEEEECCCCCEEEHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEE ALHQGHNLKNEFHTRYAALGFKESCEACHPGKETVGCMRGLHVNMTTASGKKLDFNCSDC HHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCEEEEEECCCCEEECCCCCC HGDLNMRFATGQLLDPWSYRTLPRCSNCHKSNIGEWTNAQIEKYGKIQFGGAYLNSRGHA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCEEECCCCCC DNKILCTSCHGSPHAEIPSKISWENIFYSTFNGGKAAPLGKCYGCHTDAGYSGWGRPPHG CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSDNLAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA