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The map label for this gene is 78222894

Identifier: 78222894

GI number: 78222894

Start: 1892883

End: 1893704

Strand: Direct

Name: 78222894

Synonym: Gmet_1685

Alternate gene names: NA

Gene position: 1892883-1893704 (Clockwise)

Preceding gene: 78222893

Following gene: 78222895

Centisome position: 47.35

GC content: 57.66

Gene sequence:

>822_bases
ATGAATAATGCTCTAACCATTGACGTGGAGGAATGGTTTCACGTCTGTGGTGTTGCAGGATACGGTTACGGAACTCACCC
GTCGCACGTCCTGCGGAATGTTGACAGGCTGCTCGAGTGTTTCGCGGCGGTGGACGTTACGGCCACCTTCTTCGTACTCG
GTTCGGTAGCCGAAGCATTGCCGTCGCTGGTCCCGGCAATAGCAGCGGCCGGCCACGAGGTTGCATCGCACGGTTTCTCC
CATACGCTGATTACAGCGTTGTCGCCGGCCGCATTTCGCGACGAATTGCGCCGAACCAATGATATTCTCTCGATTCAGTC
GGGCAAGCGGCCCATCGGGTTTCGTGCCCCCCAGTGGTCTCTTTCGCGTACGGTGACACCGTGGGCATTCGAGATCCTGC
ATGATGAGGGATTCCGCTACGATTCCAGTTGCAACCCGCTCCCTTTTGTGGGGGATCGGTCCGGTTCCCGCGTTCCCTAC
AAAATCGGGATGGCTGGGAAAAGTCTCTGGGAGATTCCCCCGATGGTAACGCCGTCGATGCTGGGAAACCTCCCGACCGG
CGGGGGATGGGGATTCAGGTTCTTTCCGCCGCGGATGATCGAGCGGACTGTACAGCGCCTCAATGAAGAGGGACAATCGG
CTGTTTTCTATCTTCATCCCCGGGAGATTGACCCCAGTGGTCCGCGTCTTCCATTGTCGCTCTTTCGACAGTTTGTGGCC
TATGGCCCACGGACTGACGCATTGCAGCGGCTGGTCCCGCTTATGAAGCGGTTTCGTTTTACTTCTCTGGGCAATCTGGT
GGATCAGTGGGAATCTGCGTAG

Upstream 100 bases:

>100_bases
TTAGGGTAGGCCGCGCCAAGGCCCCGGCTCTTGACTTCACCACTGTAAAATTGATATTTTCGGAAACTTGATGATTTAGG
TGAGGGGAACAAACCAGAGA

Downstream 100 bases:

>100_bases
TTATACCGGCATTCAATGCCGCTTTGACAATTGAAGCAGTTGTTCGGGAGACTCTGGAACAGGGATTGCCCCTCGTGGTC
GTCGATGACGGCTCCGAGGA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Hydrolase; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Family Sporulation Protein PdaB; Polysaccharide Deacetylase Domain Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Pda4C; Deacetylase; Peptidoglycan N-Acetylglucosamine Deacetylase A; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNNALTIDVEEWFHVCGVAGYGYGTHPSHVLRNVDRLLECFAAVDVTATFFVLGSVAEALPSLVPAIAAAGHEVASHGFS
HTLITALSPAAFRDELRRTNDILSIQSGKRPIGFRAPQWSLSRTVTPWAFEILHDEGFRYDSSCNPLPFVGDRSGSRVPY
KIGMAGKSLWEIPPMVTPSMLGNLPTGGGWGFRFFPPRMIERTVQRLNEEGQSAVFYLHPREIDPSGPRLPLSLFRQFVA
YGPRTDALQRLVPLMKRFRFTSLGNLVDQWESA

Sequences:

>Translated_273_residues
MNNALTIDVEEWFHVCGVAGYGYGTHPSHVLRNVDRLLECFAAVDVTATFFVLGSVAEALPSLVPAIAAAGHEVASHGFS
HTLITALSPAAFRDELRRTNDILSIQSGKRPIGFRAPQWSLSRTVTPWAFEILHDEGFRYDSSCNPLPFVGDRSGSRVPY
KIGMAGKSLWEIPPMVTPSMLGNLPTGGGWGFRFFPPRMIERTVQRLNEEGQSAVFYLHPREIDPSGPRLPLSLFRQFVA
YGPRTDALQRLVPLMKRFRFTSLGNLVDQWESA
>Mature_273_residues
MNNALTIDVEEWFHVCGVAGYGYGTHPSHVLRNVDRLLECFAAVDVTATFFVLGSVAEALPSLVPAIAAAGHEVASHGFS
HTLITALSPAAFRDELRRTNDILSIQSGKRPIGFRAPQWSLSRTVTPWAFEILHDEGFRYDSSCNPLPFVGDRSGSRVPY
KIGMAGKSLWEIPPMVTPSMLGNLPTGGGWGFRFFPPRMIERTVQRLNEEGQSAVFYLHPREIDPSGPRLPLSLFRQFVA
YGPRTDALQRLVPLMKRFRFTSLGNLVDQWESA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30329; Mature: 30329

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNALTIDVEEWFHVCGVAGYGYGTHPSHVLRNVDRLLECFAAVDVTATFFVLGSVAEAL
CCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLVPAIAAAGHEVASHGFSHTLITALSPAAFRDELRRTNDILSIQSGKRPIGFRAPQWS
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
LSRTVTPWAFEILHDEGFRYDSSCNPLPFVGDRSGSRVPYKIGMAGKSLWEIPPMVTPSM
HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCHHH
LGNLPTGGGWGFRFFPPRMIERTVQRLNEEGQSAVFYLHPREIDPSGPRLPLSLFRQFVA
HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
YGPRTDALQRLVPLMKRFRFTSLGNLVDQWESA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNALTIDVEEWFHVCGVAGYGYGTHPSHVLRNVDRLLECFAAVDVTATFFVLGSVAEAL
CCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLVPAIAAAGHEVASHGFSHTLITALSPAAFRDELRRTNDILSIQSGKRPIGFRAPQWS
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
LSRTVTPWAFEILHDEGFRYDSSCNPLPFVGDRSGSRVPYKIGMAGKSLWEIPPMVTPSM
HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCHHH
LGNLPTGGGWGFRFFPPRMIERTVQRLNEEGQSAVFYLHPREIDPSGPRLPLSLFRQFVA
HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
YGPRTDALQRLVPLMKRFRFTSLGNLVDQWESA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA