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The map label for this gene is ybfF [C]

Identifier: 78222895

GI number: 78222895

Start: 1893689

End: 1894351

Strand: Direct

Name: ybfF [C]

Synonym: Gmet_1686

Alternate gene names: 78222895

Gene position: 1893689-1894351 (Clockwise)

Preceding gene: 78222894

Following gene: 78222896

Centisome position: 47.37

GC content: 60.78

Gene sequence:

>663_bases
GTGGGAATCTGCGTAGTTATACCGGCATTCAATGCCGCTTTGACAATTGAAGCAGTTGTTCGGGAGACTCTGGAACAGGG
ATTGCCCCTCGTGGTCGTCGATGACGGCTCCGAGGACGGCACGGCAGACTGCGTCAGGGGACTGCCGGTGAACCTGGTCA
GCCACGGGAGAAATCGCGGCAAAGGGGCAGCCCTGAAGACAGGCTTCGCATGGGCGTTGGAATACGGTTTTTCCGGCGTG
ATCACCCTGGATTCGGATGGACAGCACGACCCTACGGCCATCACACTTCTGGCGGAAACGGCCAAGAACGACGGTTGGGA
TATCCTCGTGGCCTCCCGCTTCGCCCAGTTCAACCAGATGGCAGGGCTGCGGCGCCACTGGAACCGGTTCGGCGCCTGGT
GCATGAAGAAGCGGACCGGCTTTCAGATCGACGACAGTCAGTCGGGCTTTCGCTATTACTCGGCCCGTCTCCTGCGGATG
GTGTCTCTCGGGAAAGACGGCTACGATCTGGAGATGGAAATCCTGATGAAGGCCTGGCAGGCCGGTTGCACCATCGGCTC
GGTGCCAGTGCCGGCCCGGGTGGCGGACGGCCGGGCCACCAGCCATTTCCGGCCGGTGCGCGACACCTGGAACATTTGCA
TGACATTTCTTCGGTATATGTAG

Upstream 100 bases:

>100_bases
GACAGTTTGTGGCCTATGGCCCACGGACTGACGCATTGCAGCGGCTGGTCCCGCTTATGAAGCGGTTTCGTTTTACTTCT
CTGGGCAATCTGGTGGATCA

Downstream 100 bases:

>100_bases
GGAACTCTAGCCATGCTGCAAAGCCTTAAAAACTATTCAACGGAAAAGATCGTTTCGCTCCTCCTGTCTCTGGCCACCAA
CTCGTCCAACGAGACCCTGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGICVVIPAFNAALTIEAVVRETLEQGLPLVVVDDGSEDGTADCVRGLPVNLVSHGRNRGKGAALKTGFAWALEYGFSGV
ITLDSDGQHDPTAITLLAETAKNDGWDILVASRFAQFNQMAGLRRHWNRFGAWCMKKRTGFQIDDSQSGFRYYSARLLRM
VSLGKDGYDLEMEILMKAWQAGCTIGSVPVPARVADGRATSHFRPVRDTWNICMTFLRYM

Sequences:

>Translated_220_residues
MGICVVIPAFNAALTIEAVVRETLEQGLPLVVVDDGSEDGTADCVRGLPVNLVSHGRNRGKGAALKTGFAWALEYGFSGV
ITLDSDGQHDPTAITLLAETAKNDGWDILVASRFAQFNQMAGLRRHWNRFGAWCMKKRTGFQIDDSQSGFRYYSARLLRM
VSLGKDGYDLEMEILMKAWQAGCTIGSVPVPARVADGRATSHFRPVRDTWNICMTFLRYM
>Mature_219_residues
GICVVIPAFNAALTIEAVVRETLEQGLPLVVVDDGSEDGTADCVRGLPVNLVSHGRNRGKGAALKTGFAWALEYGFSGVI
TLDSDGQHDPTAITLLAETAKNDGWDILVASRFAQFNQMAGLRRHWNRFGAWCMKKRTGFQIDDSQSGFRYYSARLLRMV
SLGKDGYDLEMEILMKAWQAGCTIGSVPVPARVADGRATSHFRPVRDTWNICMTFLRYM

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 24282; Mature: 24151

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGICVVIPAFNAALTIEAVVRETLEQGLPLVVVDDGSEDGTADCVRGLPVNLVSHGRNRG
CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCHHHHHCCCCCC
KGAALKTGFAWALEYGFSGVITLDSDGQHDPTAITLLAETAKNDGWDILVASRFAQFNQM
CCCEEHHHHHHEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHH
AGLRRHWNRFGAWCMKKRTGFQIDDSQSGFRYYSARLLRMVSLGKDGYDLEMEILMKAWQ
HHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AGCTIGSVPVPARVADGRATSHFRPVRDTWNICMTFLRYM
HCCEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
GICVVIPAFNAALTIEAVVRETLEQGLPLVVVDDGSEDGTADCVRGLPVNLVSHGRNRG
CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCHHHHHCCCCCC
KGAALKTGFAWALEYGFSGVITLDSDGQHDPTAITLLAETAKNDGWDILVASRFAQFNQM
CCCEEHHHHHHEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHH
AGLRRHWNRFGAWCMKKRTGFQIDDSQSGFRYYSARLLRMVSLGKDGYDLEMEILMKAWQ
HHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AGCTIGSVPVPARVADGRATSHFRPVRDTWNICMTFLRYM
HCCEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]