| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222819
Identifier: 78222819
GI number: 78222819
Start: 1809046
End: 1809375
Strand: Direct
Name: 78222819
Synonym: Gmet_1610
Alternate gene names: NA
Gene position: 1809046-1809375 (Clockwise)
Preceding gene: 78222818
Following gene: 78222820
Centisome position: 45.26
GC content: 60.91
Gene sequence:
>330_bases ATGAATGCGCAACGACCCCAGGCCCTGCCGGGCCAAACCCTTGCCCTTGATACCAACTGCGGCAAACTTTATGTCACGGT GAACTGTGATCCTTCGAGTTGCCTGCCGGTGGAGATATTCTGCCGTTTCGGCAAGGCGGGCGGCTGTGGCAGTGCTGTCA TGGATGGCATGACGCGGATGATATCTTGCGGGCTCAGTGCCGGCATGGCTCCGGAAGAGGTGGTGTCGCACCTTCGGGAC ATATCGTGCCATCGCGGTCCGGGAACCTGCATGGATGCCGTTGCTCAGGCAGTGGAGGCGGTCGTGGCGCAGGAGGGAGA TGAGTGCTAG
Upstream 100 bases:
>100_bases TGAGACCCTGTCGGGACGTCCGTTTGAAAAGAAAAAGCGACATATTATGTCGTATCATTATGGTAGATTGGCATGCACCG AGTAAGGAAAGGTGCCCTCT
Downstream 100 bases:
>100_bases TTGGTTGTAGTTGGTGGTTGGGTAAGTATATGTTTCTGGGCGTGGCGCAGGGGGCGCAAGGGGAAATGTGTGAATGATAA GATTGGTCCGGGATTGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Ribonucleoside-Diphosphate Reductase Alpha Chain
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNAQRPQALPGQTLALDTNCGKLYVTVNCDPSSCLPVEIFCRFGKAGGCGSAVMDGMTRMISCGLSAGMAPEEVVSHLRD ISCHRGPGTCMDAVAQAVEAVVAQEGDEC
Sequences:
>Translated_109_residues MNAQRPQALPGQTLALDTNCGKLYVTVNCDPSSCLPVEIFCRFGKAGGCGSAVMDGMTRMISCGLSAGMAPEEVVSHLRD ISCHRGPGTCMDAVAQAVEAVVAQEGDEC >Mature_109_residues MNAQRPQALPGQTLALDTNCGKLYVTVNCDPSSCLPVEIFCRFGKAGGCGSAVMDGMTRMISCGLSAGMAPEEVVSHLRD ISCHRGPGTCMDAVAQAVEAVVAQEGDEC
Specific function: Unknown
COG id: COG0209
COG function: function code F; Ribonucleotide reductase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11309; Mature: 11309
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 13.8 %Cys+Met (Translated Protein) 8.3 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 13.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQRPQALPGQTLALDTNCGKLYVTVNCDPSSCLPVEIFCRFGKAGGCGSAVMDGMTRM CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH ISCGLSAGMAPEEVVSHLRDISCHRGPGTCMDAVAQAVEAVVAQEGDEC HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNAQRPQALPGQTLALDTNCGKLYVTVNCDPSSCLPVEIFCRFGKAGGCGSAVMDGMTRM CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH ISCGLSAGMAPEEVVSHLRDISCHRGPGTCMDAVAQAVEAVVAQEGDEC HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA