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The map label for this gene is 78222732

Identifier: 78222732

GI number: 78222732

Start: 1721896

End: 1722519

Strand: Reverse

Name: 78222732

Synonym: Gmet_1520

Alternate gene names: NA

Gene position: 1722519-1721896 (Counterclockwise)

Preceding gene: 78222745

Following gene: 78222731

Centisome position: 43.09

GC content: 64.26

Gene sequence:

>624_bases
ATGCGCATCAGCGAACAGGCCAAGCAGGAAAACCGCGGCCGCATCCTGGAGAAGGCGGCGAAACTGTTCTGCGGCAAGGG
GTTCGAAGCCACCACCACCCGGGACATCGCCCTGGCGGCCGGGCTGGCCACCGGCACCATGTTCAACTATTTCCCCAGCA
AGGAGACCCTGGCCATGACCATGGTTGCCGAAGCGCTCAGCCGCGGGGGGGATGACTATGAGCAACGCCGCAGCGGGAAT
GAAGAACTGGCAGAGGAGCTGTTTCTGTTCATCGCGTCGGGACTCCGGCGGCTGCGGCCGCTGCGCCCCTTTCTCGGGCC
GGTTCTGGAGCGCTCCTTGAGCCCCTTCCCCCGGAAGACGGTCTGCCCGGAGGGGGAAGCTGCCCGGCAGGACCACCTTG
CCGCCGTGCACCGTATCATAGGCCGGCACGGCTTCACCACTGCCCCCGATTACGTTGCCATAACCATCTACTGGTCCCTC
TATCTGGGAGTGCTCGCCTTCTGGGCCAGCGACGAGTCGCCCAACCAAGAAGCATCCCGGGCCTTGATAGACTATTCGAT
CCGGATGTTCGTACAGGTGATCTCCGGCAGCGGTCCGGATGGAGGAGGCGCGCATGAAGCCTGA

Upstream 100 bases:

>100_bases
GTCTGTGTCTCGCGTTTTGTGAGCATGTTCATTTTTTGTGTTGCCATCCTTTTGGTTAGCCGTTATAGTGAGCGCGCTCA
TATAATTGAAGGGGTAATTG

Downstream 100 bases:

>100_bases
GAAGCGTCACGCAACGGAGTCGATGACCATGGAGGCGCTGCTCGACCTTCTCCCCAAGGATGCTGCAACTGATCCGACCG
GCCGGCGGTTGGCGGAGCTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRISEQAKQENRGRILEKAAKLFCGKGFEATTTRDIALAAGLATGTMFNYFPSKETLAMTMVAEALSRGGDDYEQRRSGN
EELAEELFLFIASGLRRLRPLRPFLGPVLERSLSPFPRKTVCPEGEAARQDHLAAVHRIIGRHGFTTAPDYVAITIYWSL
YLGVLAFWASDESPNQEASRALIDYSIRMFVQVISGSGPDGGGAHEA

Sequences:

>Translated_207_residues
MRISEQAKQENRGRILEKAAKLFCGKGFEATTTRDIALAAGLATGTMFNYFPSKETLAMTMVAEALSRGGDDYEQRRSGN
EELAEELFLFIASGLRRLRPLRPFLGPVLERSLSPFPRKTVCPEGEAARQDHLAAVHRIIGRHGFTTAPDYVAITIYWSL
YLGVLAFWASDESPNQEASRALIDYSIRMFVQVISGSGPDGGGAHEA
>Mature_207_residues
MRISEQAKQENRGRILEKAAKLFCGKGFEATTTRDIALAAGLATGTMFNYFPSKETLAMTMVAEALSRGGDDYEQRRSGN
EELAEELFLFIASGLRRLRPLRPFLGPVLERSLSPFPRKTVCPEGEAARQDHLAAVHRIIGRHGFTTAPDYVAITIYWSL
YLGVLAFWASDESPNQEASRALIDYSIRMFVQVISGSGPDGGGAHEA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22785; Mature: 22785

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISEQAKQENRGRILEKAAKLFCGKGFEATTTRDIALAAGLATGTMFNYFPSKETLAMT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MVAEALSRGGDDYEQRRSGNEELAEELFLFIASGLRRLRPLRPFLGPVLERSLSPFPRKT
HHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VCPEGEAARQDHLAAVHRIIGRHGFTTAPDYVAITIYWSLYLGVLAFWASDESPNQEASR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ALIDYSIRMFVQVISGSGPDGGGAHEA
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRISEQAKQENRGRILEKAAKLFCGKGFEATTTRDIALAAGLATGTMFNYFPSKETLAMT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MVAEALSRGGDDYEQRRSGNEELAEELFLFIASGLRRLRPLRPFLGPVLERSLSPFPRKT
HHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VCPEGEAARQDHLAAVHRIIGRHGFTTAPDYVAITIYWSLYLGVLAFWASDESPNQEASR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ALIDYSIRMFVQVISGSGPDGGGAHEA
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA