| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ccrA [H]
Identifier: 78222724
GI number: 78222724
Start: 1712792
End: 1713688
Strand: Reverse
Name: ccrA [H]
Synonym: Gmet_1512
Alternate gene names: 78222724
Gene position: 1713688-1712792 (Counterclockwise)
Preceding gene: 78222726
Following gene: 78222723
Centisome position: 42.87
GC content: 60.65
Gene sequence:
>897_bases ATGAAAAGGCACTTCCTGCTGTTTCCAATCCTGGTCCTGATGCTGGCAACACCGGCTTTGGCCGATCTCACCAAAATCAG CGACAACGTATACTCCTACGTGGGGGCGACGGATGCCTCGCCAACTCACAGCTTTGCCGCCAACGCCGGGATCGTCATCG GCCGCGACGGCGTGCTGGTTGTGGATACCCTGCTCTCAGCCAAGGAGGGGGAGCGGTTCCTCGCCGACATCCGCAAGGTC ACGACCAAGCCGATCCGCTATGTGGTCGACACCCACATCCACCTGGACCATGCCTTGGGCAACTGCGTCTTTGCCAGGGA AGGCGCTACCATCATCTCCCATGAAGCCGAGCGGTCCTCGCTGGCCCAAAACGGGGCCGAGATTCTCAGAAAAGCCGGCG ACTATGGGCTGAAACCGGAAGACATGGTCGGCACCGAGATCGTCCTGCCGTCGCTGACGTTCAGCGACCGACTGACCATC GACCTGGGGGGCGAGACGGTGGAACTGCTCCGTATCGCCCCTTCCCATACCGCGGGGAGCACCATTGTCTACCTGCCGGC ACAGAAACTCCTCTTCAGCGGCGATATCCTCTTCACCGATTTCCACCCCTTCTTTGCCGACGGCGACCTCCCCAACTGGG CAAAGACCCTCGACGCCATTCTCGCCATGGACGTGGAGCGAATCGTCCCGGGTCACGGCCCCCTTTCGACGAAAAAGGAT CTGCAGGAGATGAAGGAATACTTGCGGCTTTTCGACGCCAAGGCACGGGATCTGGTGGCAACGGGCAAGGATGTCGACAC CGTTGCTGCGCAGCTCGCGAAGGTGCTGCCCAAGCGGACTCTGGCGGAGTGGATGATTCCCGCCAATCTGAAGGCCCGCT ACCTGCATAAACAGTGA
Upstream 100 bases:
>100_bases CTGTCCCAATGGACAGGTGATTTTTAGGGGACATTAACATATAGTGCATCATTCCGGCAAATGATTGGCCGTACCGAAAT GCTCGAGAGGAGAACCATTG
Downstream 100 bases:
>100_bases GAAGCACACATGTCTGCGAGAGTAACGGATTGGATGACTACCTTGTCGAGACTCCTCGTGCTACTCGTGCTCGCAACGAA TATCTTCGGCTGTTCCCTAA
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Cephalosporinase; Imipenem-cefoxitin hydrolyzing enzyme; Penicillinase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKRHFLLFPILVLMLATPALADLTKISDNVYSYVGATDASPTHSFAANAGIVIGRDGVLVVDTLLSAKEGERFLADIRKV TTKPIRYVVDTHIHLDHALGNCVFAREGATIISHEAERSSLAQNGAEILRKAGDYGLKPEDMVGTEIVLPSLTFSDRLTI DLGGETVELLRIAPSHTAGSTIVYLPAQKLLFSGDILFTDFHPFFADGDLPNWAKTLDAILAMDVERIVPGHGPLSTKKD LQEMKEYLRLFDAKARDLVATGKDVDTVAAQLAKVLPKRTLAEWMIPANLKARYLHKQ
Sequences:
>Translated_298_residues MKRHFLLFPILVLMLATPALADLTKISDNVYSYVGATDASPTHSFAANAGIVIGRDGVLVVDTLLSAKEGERFLADIRKV TTKPIRYVVDTHIHLDHALGNCVFAREGATIISHEAERSSLAQNGAEILRKAGDYGLKPEDMVGTEIVLPSLTFSDRLTI DLGGETVELLRIAPSHTAGSTIVYLPAQKLLFSGDILFTDFHPFFADGDLPNWAKTLDAILAMDVERIVPGHGPLSTKKD LQEMKEYLRLFDAKARDLVATGKDVDTVAAQLAKVLPKRTLAEWMIPANLKARYLHKQ >Mature_298_residues MKRHFLLFPILVLMLATPALADLTKISDNVYSYVGATDASPTHSFAANAGIVIGRDGVLVVDTLLSAKEGERFLADIRKV TTKPIRYVVDTHIHLDHALGNCVFAREGATIISHEAERSSLAQNGAEILRKAGDYGLKPEDMVGTEIVLPSLTFSDRLTI DLGGETVELLRIAPSHTAGSTIVYLPAQKLLFSGDILFTDFHPFFADGDLPNWAKTLDAILAMDVERIVPGHGPLSTKKD LQEMKEYLRLFDAKARDLVATGKDVDTVAAQLAKVLPKRTLAEWMIPANLKARYLHKQ
Specific function: Can hydrolyze carbapenem compounds [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 32654; Mature: 32654
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS01137 TATD_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHFLLFPILVLMLATPALADLTKISDNVYSYVGATDASPTHSFAANAGIVIGRDGVLV CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCEEE VDTLLSAKEGERFLADIRKVTTKPIRYVVDTHIHLDHALGNCVFAREGATIISHEAERSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEECCCCEEEECHHHHHH LAQNGAEILRKAGDYGLKPEDMVGTEIVLPSLTFSDRLTIDLGGETVELLRIAPSHTAGS HHHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCC TIVYLPAQKLLFSGDILFTDFHPFFADGDLPNWAKTLDAILAMDVERIVPGHGPLSTKKD EEEEECHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LQEMKEYLRLFDAKARDLVATGKDVDTVAAQLAKVLPKRTLAEWMIPANLKARYLHKQ HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC >Mature Secondary Structure MKRHFLLFPILVLMLATPALADLTKISDNVYSYVGATDASPTHSFAANAGIVIGRDGVLV CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCEEE VDTLLSAKEGERFLADIRKVTTKPIRYVVDTHIHLDHALGNCVFAREGATIISHEAERSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEECCCCEEEECHHHHHH LAQNGAEILRKAGDYGLKPEDMVGTEIVLPSLTFSDRLTIDLGGETVELLRIAPSHTAGS HHHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCC TIVYLPAQKLLFSGDILFTDFHPFFADGDLPNWAKTLDAILAMDVERIVPGHGPLSTKKD EEEEECHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LQEMKEYLRLFDAKARDLVATGKDVDTVAAQLAKVLPKRTLAEWMIPANLKARYLHKQ HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2121094; 1956298; 2110145; 8805566; 9416622; 9578564; 10210203 [H]