| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222726
Identifier: 78222726
GI number: 78222726
Start: 1714667
End: 1715911
Strand: Reverse
Name: 78222726
Synonym: Gmet_1514
Alternate gene names: NA
Gene position: 1715911-1714667 (Counterclockwise)
Preceding gene: 78222727
Following gene: 78222724
Centisome position: 42.93
GC content: 63.94
Gene sequence:
>1245_bases TTGAACGGATATCCTTTTCGGCTTTGCATGATTCTGTTCGTTTCGCTGTTCTCTTCCCCTGCCGTGGCCGGAGAGTTTTC CGGTTACGCCGAGGCAAAGGGGTTCGTCTATCCCGAACGGGCTCGCGGTCAAAGCCCATCTGTAGACGGCTGGGGAACCC TTTTCAACAAGTGGGAGGAAAAGCTGGGCGAAGCCCGGCTGACCGCATCCCTGCGGGGGGAGTGGCTTTCAACCGACGAC CAGGGAGTACGTCTCCTGGACCCGGCGGACCGGCATTTCCGCCGTCCCCCGTTTTCGGTGCAGGACTTCTGGCTGCGCCT GCCCCTTTCTCCGGAAATCGACCTGCAGATGGGGCGTTTCCAGCTGGGCTGGGGAAAGACGGACGGTTACTCCCCGGCCG ACGCCTTTCTTCCACGGGATCTGACCGATCCGTATGCCGACGAAAAGCTCCCCTTGTGGGCACTCCGGCTTTCGGGGCAG AAGGGAGACGTGCGTTACGAGGCCGTGGGCTGCCCGGTCACCACGCCGTGGCGCCTGCCGGTGCTCGGCAGCAGAAATGC GCCCATCAACGGAGAAATTCCCCGGGGGGTGTCCTTGAGAGAAATGGATAGCTCGCCGCCGGTGCTCGGGTTCGGCGCCA TCCGCCTTCTGGCCACCTTCGGCCAGTGGGATGTGGGGGGGTGGGTGCGCGCCGGCATCCGTCCGGCACCCATCCTGGAA TTCCGCACGGATCAGGCCGTGGAGACTTCCGGCGGCATCGAGATTCCCGTGGAACGCCGCTATGCAGAGGAAGAGGGGAT AGGTATCGAGCTGTCACGGGTAGTGGGGGCGTGGGTCATCCGGGGGGAAGTTGCCGGGCTCTTCTCCAGAAACGATCACC TGGGCAATGCGGCCATCGGGTCGCTGAGCGCCGAAAAAGCCTTTGGCGACGGCACGCTGCTCATGACCCTGGCCGGGAAT GCCATCGATCCGCCGGTGGATGAGATCTTGCTCTTCGATAGGGCAATCCTTCCTGCGCTCATCACGGCCTGGACCCGCAC CGAGGAGTGGGGGGAGTGGAAGACGGTCTGGAGTGTGGGGCTGAAGCATGGCGACGGCCTCGTCAAGGCTGAGCTTTCCT ACAACATTACCGACGTATGGAAGCTGACAATGGGGGGAGAAGCCCCCTACGGGTCGGGTGCCGGCGGCTTCGGCGCCCTG GATGCCGCCCGGCGCCTGCGCATGGCAATCCGCCGGAGCTGGTGA
Upstream 100 bases:
>100_bases AAGGAAGCAGGACGACTGTCGTCCTGGACCGGATCAGCTACGACAAGCCCCAGCCCGTGGGCCGCTTCACCCTGCAGAAT CTCAATCGCGAGGGGGGCGA
Downstream 100 bases:
>100_bases AGTTTGCGCATGTATCCAATTGGCCTGTGCATCCGAACATTTGGGAGGGAGTCATGAGCAATCTCAATGGTGACACCGGC ACACAACTTTTTCACTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MNGYPFRLCMILFVSLFSSPAVAGEFSGYAEAKGFVYPERARGQSPSVDGWGTLFNKWEEKLGEARLTASLRGEWLSTDD QGVRLLDPADRHFRRPPFSVQDFWLRLPLSPEIDLQMGRFQLGWGKTDGYSPADAFLPRDLTDPYADEKLPLWALRLSGQ KGDVRYEAVGCPVTTPWRLPVLGSRNAPINGEIPRGVSLREMDSSPPVLGFGAIRLLATFGQWDVGGWVRAGIRPAPILE FRTDQAVETSGGIEIPVERRYAEEEGIGIELSRVVGAWVIRGEVAGLFSRNDHLGNAAIGSLSAEKAFGDGTLLMTLAGN AIDPPVDEILLFDRAILPALITAWTRTEEWGEWKTVWSVGLKHGDGLVKAELSYNITDVWKLTMGGEAPYGSGAGGFGAL DAARRLRMAIRRSW
Sequences:
>Translated_414_residues MNGYPFRLCMILFVSLFSSPAVAGEFSGYAEAKGFVYPERARGQSPSVDGWGTLFNKWEEKLGEARLTASLRGEWLSTDD QGVRLLDPADRHFRRPPFSVQDFWLRLPLSPEIDLQMGRFQLGWGKTDGYSPADAFLPRDLTDPYADEKLPLWALRLSGQ KGDVRYEAVGCPVTTPWRLPVLGSRNAPINGEIPRGVSLREMDSSPPVLGFGAIRLLATFGQWDVGGWVRAGIRPAPILE FRTDQAVETSGGIEIPVERRYAEEEGIGIELSRVVGAWVIRGEVAGLFSRNDHLGNAAIGSLSAEKAFGDGTLLMTLAGN AIDPPVDEILLFDRAILPALITAWTRTEEWGEWKTVWSVGLKHGDGLVKAELSYNITDVWKLTMGGEAPYGSGAGGFGAL DAARRLRMAIRRSW >Mature_414_residues MNGYPFRLCMILFVSLFSSPAVAGEFSGYAEAKGFVYPERARGQSPSVDGWGTLFNKWEEKLGEARLTASLRGEWLSTDD QGVRLLDPADRHFRRPPFSVQDFWLRLPLSPEIDLQMGRFQLGWGKTDGYSPADAFLPRDLTDPYADEKLPLWALRLSGQ KGDVRYEAVGCPVTTPWRLPVLGSRNAPINGEIPRGVSLREMDSSPPVLGFGAIRLLATFGQWDVGGWVRAGIRPAPILE FRTDQAVETSGGIEIPVERRYAEEEGIGIELSRVVGAWVIRGEVAGLFSRNDHLGNAAIGSLSAEKAFGDGTLLMTLAGN AIDPPVDEILLFDRAILPALITAWTRTEEWGEWKTVWSVGLKHGDGLVKAELSYNITDVWKLTMGGEAPYGSGAGGFGAL DAARRLRMAIRRSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45523; Mature: 45523
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGYPFRLCMILFVSLFSSPAVAGEFSGYAEAKGFVYPERARGQSPSVDGWGTLFNKWEE CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH KLGEARLTASLRGEWLSTDDQGVRLLDPADRHFRRPPFSVQDFWLRLPLSPEIDLQMGRF HHHHHEEEHHHCCCEECCCCCCEEEECCCHHHHCCCCCCCCHHEEECCCCCCCCEEECEE QLGWGKTDGYSPADAFLPRDLTDPYADEKLPLWALRLSGQKGDVRYEAVGCPVTTPWRLP EECCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCC VLGSRNAPINGEIPRGVSLREMDSSPPVLGFGAIRLLATFGQWDVGGWVRAGIRPAPILE CCCCCCCCCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEE FRTDQAVETSGGIEIPVERRYAEEEGIGIELSRVVGAWVIRGEVAGLFSRNDHLGNAAIG ECCCCCEECCCCEECCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC SLSAEKAFGDGTLLMTLAGNAIDPPVDEILLFDRAILPALITAWTRTEEWGEWKTVWSVG CCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LKHGDGLVKAELSYNITDVWKLTMGGEAPYGSGAGGFGALDAARRLRMAIRRSW HHCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGYPFRLCMILFVSLFSSPAVAGEFSGYAEAKGFVYPERARGQSPSVDGWGTLFNKWEE CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH KLGEARLTASLRGEWLSTDDQGVRLLDPADRHFRRPPFSVQDFWLRLPLSPEIDLQMGRF HHHHHEEEHHHCCCEECCCCCCEEEECCCHHHHCCCCCCCCHHEEECCCCCCCCEEECEE QLGWGKTDGYSPADAFLPRDLTDPYADEKLPLWALRLSGQKGDVRYEAVGCPVTTPWRLP EECCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCC VLGSRNAPINGEIPRGVSLREMDSSPPVLGFGAIRLLATFGQWDVGGWVRAGIRPAPILE CCCCCCCCCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEE FRTDQAVETSGGIEIPVERRYAEEEGIGIELSRVVGAWVIRGEVAGLFSRNDHLGNAAIG ECCCCCEECCCCEECCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC SLSAEKAFGDGTLLMTLAGNAIDPPVDEILLFDRAILPALITAWTRTEEWGEWKTVWSVG CCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LKHGDGLVKAELSYNITDVWKLTMGGEAPYGSGAGGFGALDAARRLRMAIRRSW HHCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA