| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is wzxE [C]
Identifier: 78222702
GI number: 78222702
Start: 1685046
End: 1686485
Strand: Direct
Name: wzxE [C]
Synonym: Gmet_1490
Alternate gene names: 78222702
Gene position: 1685046-1686485 (Clockwise)
Preceding gene: 78222701
Following gene: 78222703
Centisome position: 42.15
GC content: 49.72
Gene sequence:
>1440_bases TTGACCGGGTCCTTGATTTCAAAGGGAATGGGGCTTTTATCCTCCATTCTGGTCGCCAGAATGATAGGAAAATCAGTTTT TGGTGAATTGGGTGTCATTCAGAATACCATCGGGATGCTTGGTACATTTGCGGGGTTTGGTCTGGGATTGACCGCCACAA AATTTATCGCCGAATATCGGTCTGCGGATCCGGAGAGAGCCGGACGAATCAGGGGGCTTTCAAGCGCATTTGCCTGGGTC ACCGGCACACTTGCATCATCGGTGCTGTTTATGTTCGCTCCCTGGCTTGCGAAACATACCCTTGCCGCGCCCCACCTTGC AGACCTCCTGCGGATTTGCTCATTGCTTCTGTTTCTTACTTCGATCAATGGCGCTCAGACCGGCGCGCTTTCCGGTTTCG AGGCATTCAAGACGGTAGCAAGAATCAACCTTTGGTCCGGGTTCGCCAACTTTCCCTTGATGGTTGGTGGTGTTTATGTC GCAGGGCTCAGGGGCGCGGTGTGGGGGATGATTGCCGCGGCTGGAGTGAACTGGCTGCTCAATCATCTTGCCATCCGGCG GGAATGCAGAATTGCAGGAGTACCATACACATACAAATCCTGCTGGGAAGAACGGGGAGTACTCTGGCGGTTCAGCCTGC CTTCGGTTATGGGTGGGGTGCTTATCGGTCCGGTGATGTGGGGTGCAAGCGCATTGCTGGTCAACCAGCCTAACGGCTAT GCGGAGATGGGAGTCTACAATGCAGTCATGCGCATCAAGCAGGTGCCCGAACTGGTTCTCGGTATGGTCATGGTCCCACT TCTTCCGATTCTGAGCGAACAGTTCGGCAACCGGTCTTTCGGGCAGTACAACAAAACCCTGAGATATGCATTCACGTTGT CTCTTCTGGTGCTCGTTCCGGTCTCTCTCGTTCAGATAGCGGTACCTGACGTAACCCTTATGCCCTATGGGAAGGAATTC AATGGAAACCGTCAGGTAGTGCAGTGGCTGATGATTCATTCCATACTCGTCGGATTGTTCTATCCTTTTGGGACTATTGT GGCGAGTATGAACAGGATGTGGTTCGGATGGGCTTACAACATGATGTGGAGCGTCTTGTATTTCAGCTGCTCCTATCTGC TGATTCCTGAAAGCGGCGCCAAAGGGCTTTGTATTGCGTTCTCAATTGCACACCTTGTGTCCTGCATATTCATGACTGTC TATGTCTACTGCAAGGAGCCAGACTATTTTCAGGAATTACCATTCCTTCGATTCGTATTCATTACTGTTATGGCAGTAGG TATCTGCTTCATAGCTGAAAAAACCATGACTCCCATTCTGTCAGGTTCGATAAGTGCCATTATAATTGTTGTATATATAA TGTTATTGAAAAATAGTTTAACAAATCCAAGTACAATAAGGACTACTGTCGATGCTGAGACTACCGTTTCCAGTTCGTAA
Upstream 100 bases:
>100_bases GATTATCCTCTCCTGGTGCCCGAATATACTTTCGTCAACCCTGGAGCGTATCAGAAGCTCCAAGGTTGGCTACCGATTTG CGAAGGGAATGTTCTGGTCT
Downstream 100 bases:
>100_bases TCCAGTTAAATACATACATTGGTCACTTCATTATGATTATTCCCCGACGGGATGTGAGGTGTTGCCGCGTGAAATAGAGC AGTATTTCCCGCTCATGAGA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: PTS System Polysaccharide Transporter
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTGSLISKGMGLLSSILVARMIGKSVFGELGVIQNTIGMLGTFAGFGLGLTATKFIAEYRSADPERAGRIRGLSSAFAWV TGTLASSVLFMFAPWLAKHTLAAPHLADLLRICSLLLFLTSINGAQTGALSGFEAFKTVARINLWSGFANFPLMVGGVYV AGLRGAVWGMIAAAGVNWLLNHLAIRRECRIAGVPYTYKSCWEERGVLWRFSLPSVMGGVLIGPVMWGASALLVNQPNGY AEMGVYNAVMRIKQVPELVLGMVMVPLLPILSEQFGNRSFGQYNKTLRYAFTLSLLVLVPVSLVQIAVPDVTLMPYGKEF NGNRQVVQWLMIHSILVGLFYPFGTIVASMNRMWFGWAYNMMWSVLYFSCSYLLIPESGAKGLCIAFSIAHLVSCIFMTV YVYCKEPDYFQELPFLRFVFITVMAVGICFIAEKTMTPILSGSISAIIIVVYIMLLKNSLTNPSTIRTTVDAETTVSSS
Sequences:
>Translated_479_residues MTGSLISKGMGLLSSILVARMIGKSVFGELGVIQNTIGMLGTFAGFGLGLTATKFIAEYRSADPERAGRIRGLSSAFAWV TGTLASSVLFMFAPWLAKHTLAAPHLADLLRICSLLLFLTSINGAQTGALSGFEAFKTVARINLWSGFANFPLMVGGVYV AGLRGAVWGMIAAAGVNWLLNHLAIRRECRIAGVPYTYKSCWEERGVLWRFSLPSVMGGVLIGPVMWGASALLVNQPNGY AEMGVYNAVMRIKQVPELVLGMVMVPLLPILSEQFGNRSFGQYNKTLRYAFTLSLLVLVPVSLVQIAVPDVTLMPYGKEF NGNRQVVQWLMIHSILVGLFYPFGTIVASMNRMWFGWAYNMMWSVLYFSCSYLLIPESGAKGLCIAFSIAHLVSCIFMTV YVYCKEPDYFQELPFLRFVFITVMAVGICFIAEKTMTPILSGSISAIIIVVYIMLLKNSLTNPSTIRTTVDAETTVSSS >Mature_478_residues TGSLISKGMGLLSSILVARMIGKSVFGELGVIQNTIGMLGTFAGFGLGLTATKFIAEYRSADPERAGRIRGLSSAFAWVT GTLASSVLFMFAPWLAKHTLAAPHLADLLRICSLLLFLTSINGAQTGALSGFEAFKTVARINLWSGFANFPLMVGGVYVA GLRGAVWGMIAAAGVNWLLNHLAIRRECRIAGVPYTYKSCWEERGVLWRFSLPSVMGGVLIGPVMWGASALLVNQPNGYA EMGVYNAVMRIKQVPELVLGMVMVPLLPILSEQFGNRSFGQYNKTLRYAFTLSLLVLVPVSLVQIAVPDVTLMPYGKEFN GNRQVVQWLMIHSILVGLFYPFGTIVASMNRMWFGWAYNMMWSVLYFSCSYLLIPESGAKGLCIAFSIAHLVSCIFMTVY VYCKEPDYFQELPFLRFVFITVMAVGICFIAEKTMTPILSGSISAIIIVVYIMLLKNSLTNPSTIRTTVDAETTVSSS
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52406; Mature: 52275
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSLISKGMGLLSSILVARMIGKSVFGELGVIQNTIGMLGTFAGFGLGLTATKFIAEYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SADPERAGRIRGLSSAFAWVTGTLASSVLFMFAPWLAKHTLAAPHLADLLRICSLLLFLT CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SINGAQTGALSGFEAFKTVARINLWSGFANFPLMVGGVYVAGLRGAVWGMIAAAGVNWLL HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLAIRRECRIAGVPYTYKSCWEERGVLWRFSLPSVMGGVLIGPVMWGASALLVNQPNGY HHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCC AEMGVYNAVMRIKQVPELVLGMVMVPLLPILSEQFGNRSFGQYNKTLRYAFTLSLLVLVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSLVQIAVPDVTLMPYGKEFNGNRQVVQWLMIHSILVGLFYPFGTIVASMNRMWFGWAYN HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMWSVLYFSCSYLLIPESGAKGLCIAFSIAHLVSCIFMTVYVYCKEPDYFQELPFLRFVF HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ITVMAVGICFIAEKTMTPILSGSISAIIIVVYIMLLKNSLTNPSTIRTTVDAETTVSSS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TGSLISKGMGLLSSILVARMIGKSVFGELGVIQNTIGMLGTFAGFGLGLTATKFIAEYR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SADPERAGRIRGLSSAFAWVTGTLASSVLFMFAPWLAKHTLAAPHLADLLRICSLLLFLT CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SINGAQTGALSGFEAFKTVARINLWSGFANFPLMVGGVYVAGLRGAVWGMIAAAGVNWLL HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLAIRRECRIAGVPYTYKSCWEERGVLWRFSLPSVMGGVLIGPVMWGASALLVNQPNGY HHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCC AEMGVYNAVMRIKQVPELVLGMVMVPLLPILSEQFGNRSFGQYNKTLRYAFTLSLLVLVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSLVQIAVPDVTLMPYGKEFNGNRQVVQWLMIHSILVGLFYPFGTIVASMNRMWFGWAYN HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMWSVLYFSCSYLLIPESGAKGLCIAFSIAHLVSCIFMTVYVYCKEPDYFQELPFLRFVF HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ITVMAVGICFIAEKTMTPILSGSISAIIIVVYIMLLKNSLTNPSTIRTTVDAETTVSSS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA