| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222413
Identifier: 78222413
GI number: 78222413
Start: 1339227
End: 1340204
Strand: Reverse
Name: 78222413
Synonym: Gmet_1198
Alternate gene names: NA
Gene position: 1340204-1339227 (Counterclockwise)
Preceding gene: 78222414
Following gene: 78222412
Centisome position: 33.53
GC content: 56.65
Gene sequence:
>978_bases ATGAAAGTTAGCGCATCGAATCACAAAGGGGGCACGGGTTGGGTGATGTGGGCCTGCGTCGTGGCCGTTGCCATGATCTT TTCAGTGATATCCACACCATCTTTTGCGGCGCAAACACGGCAGAAGAAATTCGCCACGCCCGACAACGCGGTGAAAGCCC TGGTTGCCGCCGTGAGGGAGGGGAACGAGAGAGATTTGACGCTCATCCTCGGTCCCGGCAGCAAGGATCTGATATCGTCC GGCGACGAGGTTGCCGACAAGACGGACCGGGAAAAATTCCTTGCGGCCTATGACCGGATGAACAGCCTCGAGCGCAAGTC CGCCACGGTCATGGTCTTGCACGTTGGCCCGGATAACTGGCCCATGCCCATACCGATCGTAAAGAAAGGGGGAAAATGGG CCTTTAATATCGGGACAGGGAAAAAGGAGATCCTGAAACGGAGAATAGGCAGGAACGAACTGCACGTCATCGATGTGCTC GACGCCTATGTGGATGCACAGCAGGAATACGCGGGCAAGGATTGCCGGGGAGGCGGAAAAGTTGAATTCGCCCAGAAGCT TATCAGTTCCGAAGGGAAACGGGACGGCCTGTACTGGGAAGCGAAGGAGGGCGAACCCGAGAGTCCGCTCGGCCCCCTGG TGGCGCGGGCGGCGAAGGAAGGGTACGCAAAGGAAAGCAACCTTTCCCCCTTCCATGGCTACTACTTCAAGATACTCAAG GGGCAGGGGAAACACGCCGCGGGAGGGGCATACCAGTATGTGGTCAAGGAAAGGATGATCCTCGGCTTTGCGCTCGTTGC CTATCCCGCCGAATATGGCAATTCGGGGGTCATGACCTTCATCGTCAATCAGGCGGGAACCGTGTACGAGAAAAATCTCG GCAAAAATACGAGACGTCTGGCAGAGGCCATGGAGCTGTTCGATCCCGACAAGACCTGGAAGCCGGTCAAGACCGGAGAA ACATCCAAGCAGAAATAA
Upstream 100 bases:
>100_bases GAGATACGACAGCCATCCGGCGGCGGCTCCCGGGGTGGCGGTAGACGTTGATACAGACTGTTTTGGTTATAGCAGGGTTG CACGCATACAGGGAGGCACC
Downstream 100 bases:
>100_bases TCGTGGTTTGACCAGCTCTCAAACTCCATGGAAGGAGATCACCATGAATGCTCGCCAAGTATTGAAACGGATGAACCAAG TGGCCTGTCTTGTGCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKVSASNHKGGTGWVMWACVVAVAMIFSVISTPSFAAQTRQKKFATPDNAVKALVAAVREGNERDLTLILGPGSKDLISS GDEVADKTDREKFLAAYDRMNSLERKSATVMVLHVGPDNWPMPIPIVKKGGKWAFNIGTGKKEILKRRIGRNELHVIDVL DAYVDAQQEYAGKDCRGGGKVEFAQKLISSEGKRDGLYWEAKEGEPESPLGPLVARAAKEGYAKESNLSPFHGYYFKILK GQGKHAAGGAYQYVVKERMILGFALVAYPAEYGNSGVMTFIVNQAGTVYEKNLGKNTRRLAEAMELFDPDKTWKPVKTGE TSKQK
Sequences:
>Translated_325_residues MKVSASNHKGGTGWVMWACVVAVAMIFSVISTPSFAAQTRQKKFATPDNAVKALVAAVREGNERDLTLILGPGSKDLISS GDEVADKTDREKFLAAYDRMNSLERKSATVMVLHVGPDNWPMPIPIVKKGGKWAFNIGTGKKEILKRRIGRNELHVIDVL DAYVDAQQEYAGKDCRGGGKVEFAQKLISSEGKRDGLYWEAKEGEPESPLGPLVARAAKEGYAKESNLSPFHGYYFKILK GQGKHAAGGAYQYVVKERMILGFALVAYPAEYGNSGVMTFIVNQAGTVYEKNLGKNTRRLAEAMELFDPDKTWKPVKTGE TSKQK >Mature_325_residues MKVSASNHKGGTGWVMWACVVAVAMIFSVISTPSFAAQTRQKKFATPDNAVKALVAAVREGNERDLTLILGPGSKDLISS GDEVADKTDREKFLAAYDRMNSLERKSATVMVLHVGPDNWPMPIPIVKKGGKWAFNIGTGKKEILKRRIGRNELHVIDVL DAYVDAQQEYAGKDCRGGGKVEFAQKLISSEGKRDGLYWEAKEGEPESPLGPLVARAAKEGYAKESNLSPFHGYYFKILK GQGKHAAGGAYQYVVKERMILGFALVAYPAEYGNSGVMTFIVNQAGTVYEKNLGKNTRRLAEAMELFDPDKTWKPVKTGE TSKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35653; Mature: 35653
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSASNHKGGTGWVMWACVVAVAMIFSVISTPSFAAQTRQKKFATPDNAVKALVAAVRE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC GNERDLTLILGPGSKDLISSGDEVADKTDREKFLAAYDRMNSLERKSATVMVLHVGPDNW CCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC PMPIPIVKKGGKWAFNIGTGKKEILKRRIGRNELHVIDVLDAYVDAQQEYAGKDCRGGGK CCCCCEEECCCCEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCC VEFAQKLISSEGKRDGLYWEAKEGEPESPLGPLVARAAKEGYAKESNLSPFHGYYFKILK HHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEE GQGKHAAGGAYQYVVKERMILGFALVAYPAEYGNSGVMTFIVNQAGTVYEKNLGKNTRRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHH AEAMELFDPDKTWKPVKTGETSKQK HHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVSASNHKGGTGWVMWACVVAVAMIFSVISTPSFAAQTRQKKFATPDNAVKALVAAVRE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC GNERDLTLILGPGSKDLISSGDEVADKTDREKFLAAYDRMNSLERKSATVMVLHVGPDNW CCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC PMPIPIVKKGGKWAFNIGTGKKEILKRRIGRNELHVIDVLDAYVDAQQEYAGKDCRGGGK CCCCCEEECCCCEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCC VEFAQKLISSEGKRDGLYWEAKEGEPESPLGPLVARAAKEGYAKESNLSPFHGYYFKILK HHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEE GQGKHAAGGAYQYVVKERMILGFALVAYPAEYGNSGVMTFIVNQAGTVYEKNLGKNTRRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHH AEAMELFDPDKTWKPVKTGETSKQK HHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA