| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222412
Identifier: 78222412
GI number: 78222412
Start: 1338005
End: 1339183
Strand: Reverse
Name: 78222412
Synonym: Gmet_1197
Alternate gene names: NA
Gene position: 1339183-1338005 (Counterclockwise)
Preceding gene: 78222413
Following gene: 78222411
Centisome position: 33.5
GC content: 59.03
Gene sequence:
>1179_bases ATGAATGCTCGCCAAGTATTGAAACGGATGAACCAAGTGGCCTGTCTTGTGCTCCTGGGGACCGGGGCGGCAGTTTCGTC CATCACCCTCGAAACAGCCACCTCCCCTGCCGCCGCCCTCGCCCTCACCATGGCCGACTGCCGTGTCTGCCATGCAAGCG GCAACAATGTCACGCGTCACCACAACCTCATAACCACCAAAGGGCTCGATTGCCTGGACTGCCACAGGCTGGTGCTCGAC CCCGTCACTAACACCTATGTGTTTGCTCCTTTCAGGGACTGCACCAGTTGCCATTCGACCTTGGTCCATTTCGACAAGCA CGGCCTCTACATCGCCAACTGGCAGACCATGTCCGGCGTCGTGCCGGGAACTGCCCCCCTCTGGACCCAGATCATGACCT TCTCCCTCGTCAATCCAGCCCAAAACCAGTATCAGGTCTGCTACAAGTGTCACTCGTACAACGCCTTCGGCCCAGCGACC ACGGGTGTCAGCCCCGTCGTGAGCCACTCCAATATCAAGCTCACCGACCAGGCCATGGAGTTCAACCCCAACAACCGGTC GGCACACCCCATACAGGTCCCCCTCAATTCTCAGACCGGCTCCTATGCACCCAAGGCGTTGCGCTCGAACCAAATGAGCC TCGGCTGGACCAACGTGGGAACCCAGACAATGGTCTGCTCGGACTGCCACGCGGCTCCGCCCACCGGGAGTACGGGAGCA ACCAAATACCTCCTCAAGGGACCCCGCACCTACTGGCCCTACAACAGAAACGGCCAGCTCTGGACCCTCGGCGACGTCAG AAGCAACGCCAACAACTGGTCGACCGATCTCTTCTGTGTCAACTGCCACCCCATCTACTCGGGGGGATCGTGGGAAAACA ACGTCCACGGAGAGGGAGATCACCATGACTCCATGACTATCGGCGGGACACGTTTCAATGGAGCCCCCTGCGTTTCCTGC CACGTGGAGATTCCCCACGGATACCGCATCAGCCGGCTCATCGGTTACGATACGGATCCGGCCCCCTACGGGACAGTCCA GGCAAACGGGACGAAGGTACAAGTGCTCAAAGGTTTCAGAAAGGCTTCTTCACCGACCAATTACGGAGAAGGGAACTGCT ATTCAACGGTTGGCGCATGCGACGAACACAACAGTCGGAGCATGACCTACGACTGGTAG
Upstream 100 bases:
>100_bases GATCCCGACAAGACCTGGAAGCCGGTCAAGACCGGAGAAACATCCAAGCAGAAATAATCGTGGTTTGACCAGCTCTCAAA CTCCATGGAAGGAGATCACC
Downstream 100 bases:
>100_bases AGGCATAACCATTACACAGCAGGCCGGTAATCGATGCGGGCTGCCAGGGAACTGGCGGCCCGTTCCAATTCAGCCCCGGC AATTTCACCCCGTTTCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MNARQVLKRMNQVACLVLLGTGAAVSSITLETATSPAAALALTMADCRVCHASGNNVTRHHNLITTKGLDCLDCHRLVLD PVTNTYVFAPFRDCTSCHSTLVHFDKHGLYIANWQTMSGVVPGTAPLWTQIMTFSLVNPAQNQYQVCYKCHSYNAFGPAT TGVSPVVSHSNIKLTDQAMEFNPNNRSAHPIQVPLNSQTGSYAPKALRSNQMSLGWTNVGTQTMVCSDCHAAPPTGSTGA TKYLLKGPRTYWPYNRNGQLWTLGDVRSNANNWSTDLFCVNCHPIYSGGSWENNVHGEGDHHDSMTIGGTRFNGAPCVSC HVEIPHGYRISRLIGYDTDPAPYGTVQANGTKVQVLKGFRKASSPTNYGEGNCYSTVGACDEHNSRSMTYDW
Sequences:
>Translated_392_residues MNARQVLKRMNQVACLVLLGTGAAVSSITLETATSPAAALALTMADCRVCHASGNNVTRHHNLITTKGLDCLDCHRLVLD PVTNTYVFAPFRDCTSCHSTLVHFDKHGLYIANWQTMSGVVPGTAPLWTQIMTFSLVNPAQNQYQVCYKCHSYNAFGPAT TGVSPVVSHSNIKLTDQAMEFNPNNRSAHPIQVPLNSQTGSYAPKALRSNQMSLGWTNVGTQTMVCSDCHAAPPTGSTGA TKYLLKGPRTYWPYNRNGQLWTLGDVRSNANNWSTDLFCVNCHPIYSGGSWENNVHGEGDHHDSMTIGGTRFNGAPCVSC HVEIPHGYRISRLIGYDTDPAPYGTVQANGTKVQVLKGFRKASSPTNYGEGNCYSTVGACDEHNSRSMTYDW >Mature_392_residues MNARQVLKRMNQVACLVLLGTGAAVSSITLETATSPAAALALTMADCRVCHASGNNVTRHHNLITTKGLDCLDCHRLVLD PVTNTYVFAPFRDCTSCHSTLVHFDKHGLYIANWQTMSGVVPGTAPLWTQIMTFSLVNPAQNQYQVCYKCHSYNAFGPAT TGVSPVVSHSNIKLTDQAMEFNPNNRSAHPIQVPLNSQTGSYAPKALRSNQMSLGWTNVGTQTMVCSDCHAAPPTGSTGA TKYLLKGPRTYWPYNRNGQLWTLGDVRSNANNWSTDLFCVNCHPIYSGGSWENNVHGEGDHHDSMTIGGTRFNGAPCVSC HVEIPHGYRISRLIGYDTDPAPYGTVQANGTKVQVLKGFRKASSPTNYGEGNCYSTVGACDEHNSRSMTYDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42686; Mature: 42686
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARQVLKRMNQVACLVLLGTGAAVSSITLETATSPAAALALTMADCRVCHASGNNVTRH CCHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCHHHEEEEHHHCEEEECCCCCEEEE HNLITTKGLDCLDCHRLVLDPVTNTYVFAPFRDCTSCHSTLVHFDKHGLYIANWQTMSGV CCEEEECCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHEEECCCCEEEEECHHHCCC VPGTAPLWTQIMTFSLVNPAQNQYQVCYKCHSYNAFGPATTGVSPVVSHSNIKLTDQAME CCCCHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEHHEE FNPNNRSAHPIQVPLNSQTGSYAPKALRSNQMSLGWTNVGTQTMVCSDCHAAPPTGSTGA ECCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCC TKYLLKGPRTYWPYNRNGQLWTLGDVRSNANNWSTDLFCVNCHPIYSGGSWENNVHGEGD EEHEECCCCEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC HHDSMTIGGTRFNGAPCVSCHVEIPHGYRISRLIGYDTDPAPYGTVQANGTKVQVLKGFR CCCCEEECCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEHHHH KASSPTNYGEGNCYSTVGACDEHNSRSMTYDW HCCCCCCCCCCCEEEECCCCCCCCCCCEEECC >Mature Secondary Structure MNARQVLKRMNQVACLVLLGTGAAVSSITLETATSPAAALALTMADCRVCHASGNNVTRH CCHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCHHHEEEEHHHCEEEECCCCCEEEE HNLITTKGLDCLDCHRLVLDPVTNTYVFAPFRDCTSCHSTLVHFDKHGLYIANWQTMSGV CCEEEECCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHEEECCCCEEEEECHHHCCC VPGTAPLWTQIMTFSLVNPAQNQYQVCYKCHSYNAFGPATTGVSPVVSHSNIKLTDQAME CCCCHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEHHEE FNPNNRSAHPIQVPLNSQTGSYAPKALRSNQMSLGWTNVGTQTMVCSDCHAAPPTGSTGA ECCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCC TKYLLKGPRTYWPYNRNGQLWTLGDVRSNANNWSTDLFCVNCHPIYSGGSWENNVHGEGD EEHEECCCCEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC HHDSMTIGGTRFNGAPCVSCHVEIPHGYRISRLIGYDTDPAPYGTVQANGTKVQVLKGFR CCCCEEECCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEHHHH KASSPTNYGEGNCYSTVGACDEHNSRSMTYDW HCCCCCCCCCCCEEEECCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA