Click here to switch to the map view.

The map label for this gene is 78222405

Identifier: 78222405

GI number: 78222405

Start: 1321924

End: 1323456

Strand: Reverse

Name: 78222405

Synonym: Gmet_1190

Alternate gene names: NA

Gene position: 1323456-1321924 (Counterclockwise)

Preceding gene: 78222406

Following gene: 78222401

Centisome position: 33.11

GC content: 56.1

Gene sequence:

>1533_bases
ATGGACTTTACTTATCCGCCAACATGCTCCAAACAGTTCCGGGGGATCCTAAAGGTCAGCGTCCGGTATGCGCTCCCGCT
GGCAATGGCCCTCTCCGCAAGCACCGGCCATTGCGACACCTTACCGGATACATTGAGTCTTTCACGGGGAATGGCAATCG
AAATGGCGATCCGCAAGAACATCGATCTGCGGGTCGAATCTCTTAATTACTCAATGGCGGAAACGGACGTTGACCGGAGC
TGGGGAATCTATAACCCGATTCTGGTAGTTTCCGGCACGGGCGGAGTCACATCCGTTCCGGGCGACCCCTTTTTCAGCAG
CAGATACTCAACCGGCTCCATCGGCCTGACTCAGTATCTTCCGACAGGCGGATACTTTTCTGCATCAACCCAAAGCGGTT
ATACAAACGCCGAGGTCAGCAACCCGGACTCATCCACCTCGACCTGGCAGTCAACGGCGGGCCTCGCACTCTCGCAACCT
TTGTTGAAAAATGCGGGGAAGCAAACGATGGAATTGAGCATAACGCTGGCTGCCAATGCGCTGGAGGATTCAAGGGAACG
GTACCGCTTCACCACCACCGATACCGTTCTGGCCGTCATTACCGCATACAATCACCTCTACACCTTGCGGCAGACCCTGG
AAACGAAGAGGGGAGCCCTGAAATCCGCCCAGGATTTCCTCGAAGAATTACGCAAAAGGCCAAAACCGACCGCCCTCCAG
AAGATAGAGCTGGCCAACACGGAATACACCATCGCCCAGAGGCTGAAAGACCTCGTGGAAGCGGAGAGAAGTGTAAGTGA
CCAGGAAGCGAACCTCCGATACCTGATCGGAATGGAGCAAAAGACCCGGATCATTCCTGTTGATCCGCCCCCAAGAGAGG
AGCCGCAGACAACGGAGGATCAGGCGGTCAAGTCTGCCCTGGAGTACCGCTCCGACCTGAAACAGCTCCGCATAACCTTG
AAATCGTCTCAACTGCAGGAACGGGTGGCCGATCATCAGACATTGCCCGAACTCACTGTCAGCGGCAGCGGGGGCCTCAC
CGGGACCGGCACCAACTTTGCGGAAAGCTACCGGAAGGTAGCGCAGAAGCCGGGAACGTACTGGTCGGCGGGCATGCAAT
TAAACGTGCCGCTGGGCAACACCGCCGCCTATAACGATTATCTCAAAAACAAAATTAGGACCGAGCAGGTGCAAAACCAG
ATCGATGCGCTCGTATGGAAGATACGCAACGACGTCGAGGCCGACATGCGGGCGCTTATTTCCGCGCGGTTGCAGATACA
GACGACGGAAAAAGCACTTCAGTACGCCGAGCAGCGTCACGACGAATACCGGAATCAAACCAGGGCCGGTGCCACGACGG
TTCAGGATTTCATCAATGCGGAAAACGACCTTATTGCCGCCCGAAACGCCCATCAGGACTCAACGGAAGCATTCGCGTAC
GCCGTCTCGAAGCTGTGGCGCGACACCGGCGAGCTTCTCGACCATCAGGGAGTACGTATCACGAGCCCGGATCAACTCAA
GTCGAACAAATAG

Upstream 100 bases:

>100_bases
GGCTTTTTTCTTTTGTCCTCCCACGACATCAAATCCCCCCCCCATGAAATCGCACCCGACAATGTTATAATTAGCCCACT
TACCGATGGGAGGGCTAATC

Downstream 100 bases:

>100_bases
GGGGCCGGCCTATATCCATTTCTTCCTTCTGAAAAAGACGAGCATCCCCCCGATCACCAGAAGCATGAGGATGAGCACGG
CGGGGTAGCCCCAGCGCCAG

Product: Outer membrane efflux protein

Products: NA

Alternate protein names: RND Family Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MDFTYPPTCSKQFRGILKVSVRYALPLAMALSASTGHCDTLPDTLSLSRGMAIEMAIRKNIDLRVESLNYSMAETDVDRS
WGIYNPILVVSGTGGVTSVPGDPFFSSRYSTGSIGLTQYLPTGGYFSASTQSGYTNAEVSNPDSSTSTWQSTAGLALSQP
LLKNAGKQTMELSITLAANALEDSRERYRFTTTDTVLAVITAYNHLYTLRQTLETKRGALKSAQDFLEELRKRPKPTALQ
KIELANTEYTIAQRLKDLVEAERSVSDQEANLRYLIGMEQKTRIIPVDPPPREEPQTTEDQAVKSALEYRSDLKQLRITL
KSSQLQERVADHQTLPELTVSGSGGLTGTGTNFAESYRKVAQKPGTYWSAGMQLNVPLGNTAAYNDYLKNKIRTEQVQNQ
IDALVWKIRNDVEADMRALISARLQIQTTEKALQYAEQRHDEYRNQTRAGATTVQDFINAENDLIAARNAHQDSTEAFAY
AVSKLWRDTGELLDHQGVRITSPDQLKSNK

Sequences:

>Translated_510_residues
MDFTYPPTCSKQFRGILKVSVRYALPLAMALSASTGHCDTLPDTLSLSRGMAIEMAIRKNIDLRVESLNYSMAETDVDRS
WGIYNPILVVSGTGGVTSVPGDPFFSSRYSTGSIGLTQYLPTGGYFSASTQSGYTNAEVSNPDSSTSTWQSTAGLALSQP
LLKNAGKQTMELSITLAANALEDSRERYRFTTTDTVLAVITAYNHLYTLRQTLETKRGALKSAQDFLEELRKRPKPTALQ
KIELANTEYTIAQRLKDLVEAERSVSDQEANLRYLIGMEQKTRIIPVDPPPREEPQTTEDQAVKSALEYRSDLKQLRITL
KSSQLQERVADHQTLPELTVSGSGGLTGTGTNFAESYRKVAQKPGTYWSAGMQLNVPLGNTAAYNDYLKNKIRTEQVQNQ
IDALVWKIRNDVEADMRALISARLQIQTTEKALQYAEQRHDEYRNQTRAGATTVQDFINAENDLIAARNAHQDSTEAFAY
AVSKLWRDTGELLDHQGVRITSPDQLKSNK
>Mature_510_residues
MDFTYPPTCSKQFRGILKVSVRYALPLAMALSASTGHCDTLPDTLSLSRGMAIEMAIRKNIDLRVESLNYSMAETDVDRS
WGIYNPILVVSGTGGVTSVPGDPFFSSRYSTGSIGLTQYLPTGGYFSASTQSGYTNAEVSNPDSSTSTWQSTAGLALSQP
LLKNAGKQTMELSITLAANALEDSRERYRFTTTDTVLAVITAYNHLYTLRQTLETKRGALKSAQDFLEELRKRPKPTALQ
KIELANTEYTIAQRLKDLVEAERSVSDQEANLRYLIGMEQKTRIIPVDPPPREEPQTTEDQAVKSALEYRSDLKQLRITL
KSSQLQERVADHQTLPELTVSGSGGLTGTGTNFAESYRKVAQKPGTYWSAGMQLNVPLGNTAAYNDYLKNKIRTEQVQNQ
IDALVWKIRNDVEADMRALISARLQIQTTEKALQYAEQRHDEYRNQTRAGATTVQDFINAENDLIAARNAHQDSTEAFAY
AVSKLWRDTGELLDHQGVRITSPDQLKSNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56678; Mature: 56678

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTYPPTCSKQFRGILKVSVRYALPLAMALSASTGHCDTLPDTLSLSRGMAIEMAIRKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCC
IDLRVESLNYSMAETDVDRSWGIYNPILVVSGTGGVTSVPGDPFFSSRYSTGSIGLTQYL
CCEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PTGGYFSASTQSGYTNAEVSNPDSSTSTWQSTAGLALSQPLLKNAGKQTMELSITLAANA
CCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEEEEEEEHHH
LEDSRERYRFTTTDTVLAVITAYNHLYTLRQTLETKRGALKSAQDFLEELRKRPKPTALQ
HHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KIELANTEYTIAQRLKDLVEAERSVSDQEANLRYLIGMEQKTRIIPVDPPPREEPQTTED
HEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHH
QAVKSALEYRSDLKQLRITLKSSQLQERVADHQTLPELTVSGSGGLTGTGTNFAESYRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHH
AQKPGTYWSAGMQLNVPLGNTAAYNDYLKNKIRTEQVQNQIDALVWKIRNDVEADMRALI
HHCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARLQIQTTEKALQYAEQRHDEYRNQTRAGATTVQDFINAENDLIAARNAHQDSTEAFAY
HHHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
AVSKLWRDTGELLDHQGVRITSPDQLKSNK
HHHHHHHHHHHHHHCCCCEECCCHHHCCCC
>Mature Secondary Structure
MDFTYPPTCSKQFRGILKVSVRYALPLAMALSASTGHCDTLPDTLSLSRGMAIEMAIRKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCC
IDLRVESLNYSMAETDVDRSWGIYNPILVVSGTGGVTSVPGDPFFSSRYSTGSIGLTQYL
CCEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PTGGYFSASTQSGYTNAEVSNPDSSTSTWQSTAGLALSQPLLKNAGKQTMELSITLAANA
CCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEEEEEEEHHH
LEDSRERYRFTTTDTVLAVITAYNHLYTLRQTLETKRGALKSAQDFLEELRKRPKPTALQ
HHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KIELANTEYTIAQRLKDLVEAERSVSDQEANLRYLIGMEQKTRIIPVDPPPREEPQTTED
HEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHH
QAVKSALEYRSDLKQLRITLKSSQLQERVADHQTLPELTVSGSGGLTGTGTNFAESYRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHH
AQKPGTYWSAGMQLNVPLGNTAAYNDYLKNKIRTEQVQNQIDALVWKIRNDVEADMRALI
HHCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARLQIQTTEKALQYAEQRHDEYRNQTRAGATTVQDFINAENDLIAARNAHQDSTEAFAY
HHHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
AVSKLWRDTGELLDHQGVRITSPDQLKSNK
HHHHHHHHHHHHHHCCCCEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA