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The map label for this gene is 78222284

Identifier: 78222284

GI number: 78222284

Start: 1187263

End: 1189023

Strand: Direct

Name: 78222284

Synonym: Gmet_1066

Alternate gene names: NA

Gene position: 1187263-1189023 (Clockwise)

Preceding gene: 78222283

Following gene: 78222285

Centisome position: 29.7

GC content: 56.05

Gene sequence:

>1761_bases
ATGATACTGCAGGCGTTGCATGGCCTTTATGTTCGTAAACAGGATGAACTGCCGCCGGAAGGATTCGAGCAAAAGGAAAT
CCCTTTTCTGATTGTCCTCAATGGTGACGGAACCTTCGGCGACTTTCAGGATACGAGGAACAGGTCGGGAAAGAAACTGA
TCGCGCGTCAGTTCAGGGTGCCCAAGGACAGCGGTAGATCGGGGAAAAACGCATGGCAGAGCGCCAACCTGCTCTGGGAC
CATTACGGCTATGTCCTTTGCTGGCCCAAATCGGATTCGGATGCCGACAAGGAGATGGCGCGGAAGCAGCACGGAACATT
CGTTGAGAGGGTTGGAGAGCTTGCCGCTGCGTATCCTCAAGATAAAGGCGTTCAGGCGGTCATGCGCTTTTTGAAATCCG
ACGAGAGAGAAAAGTTACTTGAACATCCTGCGTGGGAGGAATGTCGGAAAATTCCAGGCTGTAATCTGAGCTTCAGGTTG
TCCGATGAGTTAAGCCTTGTCTGTGAAAGCGATAACGTCAGGGAATTCGTCGCGAAATCGTCCGCACAGGACGACGATGA
AGATGACTCGACAACGGGGGACGTGGAAGGGATATGCCTCGTAACCGGCGAAAGTGCCACCGTGGCTCGACTGCATCCGC
GAACGCCGATCATTGGGGCGAAGAGCAACGCGAAAATTGTCTCCTTTCAGAAAAACATGGGGTTCGACTCCTATGGCCGG
CAGCAAAGCTACAACGCGCCGACCAGCAAGGGCGCCGCCTTTGCCTACACCACCGCCCTTAACCATCTGCTGGCCAAGGA
ATCAAGACAGAAACTGCTGATTGGCAGCGACACCATGGTTTTCTGGGCTGGTGAAAAGCACCGTGTCGAAGATCTTTTCG
CCGATCTTTTCGGCGAACCGGCCAAGGAAAACCTCGATCAAACAACCCAGGCGATCCGTTCCCTCTACACCGCTCCACAA
GCCGGCACACCGCCCCTCGACCACGATCTCACCCCGTTCTTCGTCCTCGGCCTTGCCCCCAACGCGGCCCGCATTGCCGT
CCGTTTCTGGCACGCCGGAACGGTCGGCGAAACCGCCCGCCATATTCGACAGCACTTCGATGACTGCGCCGTCGTTCACG
GCCCCAATCAGCCGGAATACCTTTCCCTTTTCCGGTTGCTGGTTTCCACGGCAATGCAGGGGAAGTCAGAGAACATCCCA
CCGAATCTGGCCGGCGACCTCATGAAATCGATTCTGGCGGGAACGCCCTATCCCCAGTCTTTGCTTTCGGCGGCGATTCG
GCGCTGTCGTGCCGAGCGCGAAATCACCTACCCCCGCGTGTCTGTCATAAAGGCCGTATTGGCGCGGGGAACAAGATACT
ACACATCAAACGAACAGGAGGTCGGCATGGCACTCGATGTAACCAATACCAATCCGGGCTATCGGCTCGGGCGGCTTTTC
GCCGTACTGGAGAAGATCCAGGAAGAGGCAAGCCCCGGCATCAATGCCACCATCCGTGACCGCTTCTACGGCGCGGCTTC
GGGAACGCCGGTGGCAGCATTCCCGCACCTGATGAAGCTGAAGAACCACCATCTGGCAAAGCTCGAAAACCGGGGCCGGG
CGGTCAATCTGGAAAAGATCGTCGGCGAAATCATGGATGGTCTTGATGATTTTCCGACTCACCTGAGTCTCCAGGACCAG
GGGCGCTTTGCTGTTGGCTACTATCATCAGCGCCAGGATTTTTTCAAAAAGAACGAAACCACAACCAACGTGAATCCATA
G

Upstream 100 bases:

>100_bases
TCCATACCTGCACCGACGGTTGCCGCCCTTCGTTCTTCCGGGCAGCTTTGAAGGATGGCAGAATGATGGTTCCGGCCCGT
GACAGCGAGGAGGTGCGGCG

Downstream 100 bases:

>100_bases
GAGGAGATGACCATGACCATTCAGAACCGCTATGACTTTGTACTGTTTTTCGACGTGAAGGACGGCAACCCCAACGGCGA
CCCTGACGCCGGCAACCTTC

Product: CRISPR-associated Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Protein; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MILQALHGLYVRKQDELPPEGFEQKEIPFLIVLNGDGTFGDFQDTRNRSGKKLIARQFRVPKDSGRSGKNAWQSANLLWD
HYGYVLCWPKSDSDADKEMARKQHGTFVERVGELAAAYPQDKGVQAVMRFLKSDEREKLLEHPAWEECRKIPGCNLSFRL
SDELSLVCESDNVREFVAKSSAQDDDEDDSTTGDVEGICLVTGESATVARLHPRTPIIGAKSNAKIVSFQKNMGFDSYGR
QQSYNAPTSKGAAFAYTTALNHLLAKESRQKLLIGSDTMVFWAGEKHRVEDLFADLFGEPAKENLDQTTQAIRSLYTAPQ
AGTPPLDHDLTPFFVLGLAPNAARIAVRFWHAGTVGETARHIRQHFDDCAVVHGPNQPEYLSLFRLLVSTAMQGKSENIP
PNLAGDLMKSILAGTPYPQSLLSAAIRRCRAEREITYPRVSVIKAVLARGTRYYTSNEQEVGMALDVTNTNPGYRLGRLF
AVLEKIQEEASPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLENRGRAVNLEKIVGEIMDGLDDFPTHLSLQDQ
GRFAVGYYHQRQDFFKKNETTTNVNP

Sequences:

>Translated_586_residues
MILQALHGLYVRKQDELPPEGFEQKEIPFLIVLNGDGTFGDFQDTRNRSGKKLIARQFRVPKDSGRSGKNAWQSANLLWD
HYGYVLCWPKSDSDADKEMARKQHGTFVERVGELAAAYPQDKGVQAVMRFLKSDEREKLLEHPAWEECRKIPGCNLSFRL
SDELSLVCESDNVREFVAKSSAQDDDEDDSTTGDVEGICLVTGESATVARLHPRTPIIGAKSNAKIVSFQKNMGFDSYGR
QQSYNAPTSKGAAFAYTTALNHLLAKESRQKLLIGSDTMVFWAGEKHRVEDLFADLFGEPAKENLDQTTQAIRSLYTAPQ
AGTPPLDHDLTPFFVLGLAPNAARIAVRFWHAGTVGETARHIRQHFDDCAVVHGPNQPEYLSLFRLLVSTAMQGKSENIP
PNLAGDLMKSILAGTPYPQSLLSAAIRRCRAEREITYPRVSVIKAVLARGTRYYTSNEQEVGMALDVTNTNPGYRLGRLF
AVLEKIQEEASPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLENRGRAVNLEKIVGEIMDGLDDFPTHLSLQDQ
GRFAVGYYHQRQDFFKKNETTTNVNP
>Mature_586_residues
MILQALHGLYVRKQDELPPEGFEQKEIPFLIVLNGDGTFGDFQDTRNRSGKKLIARQFRVPKDSGRSGKNAWQSANLLWD
HYGYVLCWPKSDSDADKEMARKQHGTFVERVGELAAAYPQDKGVQAVMRFLKSDEREKLLEHPAWEECRKIPGCNLSFRL
SDELSLVCESDNVREFVAKSSAQDDDEDDSTTGDVEGICLVTGESATVARLHPRTPIIGAKSNAKIVSFQKNMGFDSYGR
QQSYNAPTSKGAAFAYTTALNHLLAKESRQKLLIGSDTMVFWAGEKHRVEDLFADLFGEPAKENLDQTTQAIRSLYTAPQ
AGTPPLDHDLTPFFVLGLAPNAARIAVRFWHAGTVGETARHIRQHFDDCAVVHGPNQPEYLSLFRLLVSTAMQGKSENIP
PNLAGDLMKSILAGTPYPQSLLSAAIRRCRAEREITYPRVSVIKAVLARGTRYYTSNEQEVGMALDVTNTNPGYRLGRLF
AVLEKIQEEASPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLENRGRAVNLEKIVGEIMDGLDDFPTHLSLQDQ
GRFAVGYYHQRQDFFKKNETTTNVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65344; Mature: 65344

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQALHGLYVRKQDELPPEGFEQKEIPFLIVLNGDGTFGDFQDTRNRSGKKLIARQFRV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHCC
PKDSGRSGKNAWQSANLLWDHYGYVLCWPKSDSDADKEMARKQHGTFVERVGELAAAYPQ
CCCCCCCCCHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
DKGVQAVMRFLKSDEREKLLEHPAWEECRKIPGCNLSFRLSDELSLVCESDNVREFVAKS
CCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHHC
SAQDDDEDDSTTGDVEGICLVTGESATVARLHPRTPIIGAKSNAKIVSFQKNMGFDSYGR
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCC
QQSYNAPTSKGAAFAYTTALNHLLAKESRQKLLIGSDTMVFWAGEKHRVEDLFADLFGEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCH
AKENLDQTTQAIRSLYTAPQAGTPPLDHDLTPFFVLGLAPNAARIAVRFWHAGTVGETAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHH
HIRQHFDDCAVVHGPNQPEYLSLFRLLVSTAMQGKSENIPPNLAGDLMKSILAGTPYPQS
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHH
LLSAAIRRCRAEREITYPRVSVIKAVLARGTRYYTSNEQEVGMALDVTNTNPGYRLGRLF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCHHHHHHH
AVLEKIQEEASPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLENRGRAVNLEKI
HHHHHHHHHHCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
VGEIMDGLDDFPTHLSLQDQGRFAVGYYHQRQDFFKKNETTTNVNP
HHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MILQALHGLYVRKQDELPPEGFEQKEIPFLIVLNGDGTFGDFQDTRNRSGKKLIARQFRV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHCC
PKDSGRSGKNAWQSANLLWDHYGYVLCWPKSDSDADKEMARKQHGTFVERVGELAAAYPQ
CCCCCCCCCHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
DKGVQAVMRFLKSDEREKLLEHPAWEECRKIPGCNLSFRLSDELSLVCESDNVREFVAKS
CCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHHC
SAQDDDEDDSTTGDVEGICLVTGESATVARLHPRTPIIGAKSNAKIVSFQKNMGFDSYGR
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCC
QQSYNAPTSKGAAFAYTTALNHLLAKESRQKLLIGSDTMVFWAGEKHRVEDLFADLFGEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCH
AKENLDQTTQAIRSLYTAPQAGTPPLDHDLTPFFVLGLAPNAARIAVRFWHAGTVGETAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHH
HIRQHFDDCAVVHGPNQPEYLSLFRLLVSTAMQGKSENIPPNLAGDLMKSILAGTPYPQS
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHH
LLSAAIRRCRAEREITYPRVSVIKAVLARGTRYYTSNEQEVGMALDVTNTNPGYRLGRLF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCHHHHHHH
AVLEKIQEEASPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLENRGRAVNLEKI
HHHHHHHHHHCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
VGEIMDGLDDFPTHLSLQDQGRFAVGYYHQRQDFFKKNETTTNVNP
HHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA