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The map label for this gene is 78222283

Identifier: 78222283

GI number: 78222283

Start: 1186583

End: 1187266

Strand: Direct

Name: 78222283

Synonym: Gmet_1065

Alternate gene names: NA

Gene position: 1186583-1187266 (Clockwise)

Preceding gene: 78222282

Following gene: 78222284

Centisome position: 29.68

GC content: 60.38

Gene sequence:

>684_bases
ATGGATATGGCATCCACCAAAAGCCGGATGCTGCGCCTCAAGGTCTGGGGCGACAACGCCTGCTTCACTCGGCCCGAAAT
GAAGGTGGAGCGGGTCTCCTATGATGTCATGACCCCATCGGCGGCGAGGGGCGTTCTGGAGGCGATTCTCTGGAAACCGG
CCATCCGATGGCAGGTGGACCGGATCGACGTGCTGAAGCCGATCCGCTGGGAGTCGGTGCGGCGCAACGAAGTGGGGAGC
GTCATGTCTCCACGAACTAATGGGCTGTTCATCGAGGAACAGCGCCAGCAGCGGGCCGGCCTGTTCCTGCGGGATGTCGC
TTATACCATCCACGCTTGGTTCGAGATGACCGTGCCGCCAGACGAAAGGAACAACGTCATCAAGTTCCAGGAAATGTTCA
TCTGTCGGGCATCCAAGGGAAAATGCTTCAACCAGCCGTACCTGGGGACACGGGAGTTCTCTGCCGGCTTCGAGCTAATT
CCCCACGACCAATCCCTGCCGGAGCCGATTGTCGAGACGCGCGACCTCGGTTTCATGCTCTACGATCTCTGCCACGACAC
CAGCAGGGATGAGGGGCACGTCCATACCTGCACCGACGGTTGCCGCCCTTCGTTCTTCCGGGCAGCTTTGAAGGATGGCA
GAATGATGGTTCCGGCCCGTGACAGCGAGGAGGTGCGGCGATGA

Upstream 100 bases:

>100_bases
AAATGGAAAAGGATTGAAACAGTTTCGAAAACAGGTGGCAAAGTGAAAGCGCCCGCCTCAGTGGGCGGGCGCAGTAGTCT
CCGCGAAAGGAGGGAAATGT

Downstream 100 bases:

>100_bases
TACTGCAGGCGTTGCATGGCCTTTATGTTCGTAAACAGGATGAACTGCCGCCGGAAGGATTCGAGCAAAAGGAAATCCCT
TTTCTGATTGTCCTCAATGG

Product: CRISPR-associated Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Dvulg Subtype; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDMASTKSRMLRLKVWGDNACFTRPEMKVERVSYDVMTPSAARGVLEAILWKPAIRWQVDRIDVLKPIRWESVRRNEVGS
VMSPRTNGLFIEEQRQQRAGLFLRDVAYTIHAWFEMTVPPDERNNVIKFQEMFICRASKGKCFNQPYLGTREFSAGFELI
PHDQSLPEPIVETRDLGFMLYDLCHDTSRDEGHVHTCTDGCRPSFFRAALKDGRMMVPARDSEEVRR

Sequences:

>Translated_227_residues
MDMASTKSRMLRLKVWGDNACFTRPEMKVERVSYDVMTPSAARGVLEAILWKPAIRWQVDRIDVLKPIRWESVRRNEVGS
VMSPRTNGLFIEEQRQQRAGLFLRDVAYTIHAWFEMTVPPDERNNVIKFQEMFICRASKGKCFNQPYLGTREFSAGFELI
PHDQSLPEPIVETRDLGFMLYDLCHDTSRDEGHVHTCTDGCRPSFFRAALKDGRMMVPARDSEEVRR
>Mature_227_residues
MDMASTKSRMLRLKVWGDNACFTRPEMKVERVSYDVMTPSAARGVLEAILWKPAIRWQVDRIDVLKPIRWESVRRNEVGS
VMSPRTNGLFIEEQRQQRAGLFLRDVAYTIHAWFEMTVPPDERNNVIKFQEMFICRASKGKCFNQPYLGTREFSAGFELI
PHDQSLPEPIVETRDLGFMLYDLCHDTSRDEGHVHTCTDGCRPSFFRAALKDGRMMVPARDSEEVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26378; Mature: 26378

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMASTKSRMLRLKVWGDNACFTRPEMKVERVSYDVMTPSAARGVLEAILWKPAIRWQVD
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEHEEEEEECCHHHHHHHHHHHHCCCCEEEEC
RIDVLKPIRWESVRRNEVGSVMSPRTNGLFIEEQRQQRAGLFLRDVAYTIHAWFEMTVPP
HHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHEEEEEEECCC
DERNNVIKFQEMFICRASKGKCFNQPYLGTREFSAGFELIPHDQSLPEPIVETRDLGFML
CCCCCEEEEEHEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH
YDLCHDTSRDEGHVHTCTDGCRPSFFRAALKDGRMMVPARDSEEVRR
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHCC
>Mature Secondary Structure
MDMASTKSRMLRLKVWGDNACFTRPEMKVERVSYDVMTPSAARGVLEAILWKPAIRWQVD
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEHEEEEEECCHHHHHHHHHHHHCCCCEEEEC
RIDVLKPIRWESVRRNEVGSVMSPRTNGLFIEEQRQQRAGLFLRDVAYTIHAWFEMTVPP
HHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHEEEEEEECCC
DERNNVIKFQEMFICRASKGKCFNQPYLGTREFSAGFELIPHDQSLPEPIVETRDLGFML
CCCCCEEEEEHEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH
YDLCHDTSRDEGHVHTCTDGCRPSFFRAALKDGRMMVPARDSEEVRR
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA