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The map label for this gene is 78222226

Identifier: 78222226

GI number: 78222226

Start: 1121480

End: 1122490

Strand: Reverse

Name: 78222226

Synonym: Gmet_1006

Alternate gene names: NA

Gene position: 1122490-1121480 (Counterclockwise)

Preceding gene: 78222227

Following gene: 78222223

Centisome position: 28.08

GC content: 61.72

Gene sequence:

>1011_bases
ATGAAAGAAGCCATGTTCTACAAGCGGGAGAGCGGCAACAGGGCCCACTGTGGCCTCTGCCGCCACCGGTGCATGATCGC
CGACGGCTCCCGGGGCATCTGCGCGGTTCGTGAGAACCGGGGGGGTACCCTCTATTCGCTGGTCTACGGCAAGCTGGTTG
CCGAGAACGTTGACCCCATCGAGAAAAAGCCCCTCTTCCACGTACTGCCGGGAAGCAAGTCATTTTCCATCGCCACGATG
GGGTGTAACTTCCGCTGCCACCACTGTCAGAACTATTCCATCTCCCAGGTGGCTCCCAAAGGCCCCGTTGCCGGGATTCA
ACAGACACCGGAATCCGTGGTGGAAAAGGCCCTGGCAACGGGATCCCGCTCCATCGCCTATACCTACACCGAGCCCACCA
TCTTCTTCGAGTTCGCCTATGACACCGCCCGGCTCGCCCGCCAGGCGGGACTTCTGAATGTGTTCGTTACCAACGGCTAC
ATCACCCGGGAGGCGCTGACGGCCATCGCCCCCTATCTGGACGCGGCCAACATCGACCTGAAGGGGTTCACGGAGGACTT
CTACCGCGATTACGTCCATGGCCGCCTGTCAGAGGTTCTCGACTCCATTATCGAGTACCGGAAGCAGGGGATCTGGATCG
AGCTCACCACCCTCGTCATCCCGGGTCTCAACGACTCCGACGGCGAGCTGAAGGGTATCGCCTCCTTCATCGTCGACAAC
CTGGGGGCCGACACCCCATGGCACGTGACCCAGTTCTACCCCACCTACAAGCTGACCGACCGTCCCCGGACGCCGGTGGA
GACGCTGCGGCGGGCCCGCGACATCGGCAAGGCGGCGGGACTCAACTACGTTTATGAAGGGAATGTCCCCGGCGAGGGGG
GAGAGAATACCTGGTGTCCATCCTGCTCTGCCCTGCTCATTGAGCGCTACGGCTACCTGATCGAGAATAACCAGATCCGG
GACGGGAGGTGCCCCGACTGCGGCACAACCATTGTCGGCATCGGCATGTGA

Upstream 100 bases:

>100_bases
GGGTGGCCCCCTACGCCCCCTGTTGCATCAGTTGCCAGACTCGCCGGGAAGGCCCCTCGTACGGGCCGGGCGTAACGCTC
TGAGAGTCGGAGGGTATGCC

Downstream 100 bases:

>100_bases
TCCGGCTTTTCATTCCAGCATGAAATAAAACGTTGCCCCTTTCCCCACTTGGCCTTCAGCCCAGACCTTCCCGCCGTGGC
GGTGGATGATACGCTGGACC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKEAMFYKRESGNRAHCGLCRHRCMIADGSRGICAVRENRGGTLYSLVYGKLVAENVDPIEKKPLFHVLPGSKSFSIATM
GCNFRCHHCQNYSISQVAPKGPVAGIQQTPESVVEKALATGSRSIAYTYTEPTIFFEFAYDTARLARQAGLLNVFVTNGY
ITREALTAIAPYLDAANIDLKGFTEDFYRDYVHGRLSEVLDSIIEYRKQGIWIELTTLVIPGLNDSDGELKGIASFIVDN
LGADTPWHVTQFYPTYKLTDRPRTPVETLRRARDIGKAAGLNYVYEGNVPGEGGENTWCPSCSALLIERYGYLIENNQIR
DGRCPDCGTTIVGIGM

Sequences:

>Translated_336_residues
MKEAMFYKRESGNRAHCGLCRHRCMIADGSRGICAVRENRGGTLYSLVYGKLVAENVDPIEKKPLFHVLPGSKSFSIATM
GCNFRCHHCQNYSISQVAPKGPVAGIQQTPESVVEKALATGSRSIAYTYTEPTIFFEFAYDTARLARQAGLLNVFVTNGY
ITREALTAIAPYLDAANIDLKGFTEDFYRDYVHGRLSEVLDSIIEYRKQGIWIELTTLVIPGLNDSDGELKGIASFIVDN
LGADTPWHVTQFYPTYKLTDRPRTPVETLRRARDIGKAAGLNYVYEGNVPGEGGENTWCPSCSALLIERYGYLIENNQIR
DGRCPDCGTTIVGIGM
>Mature_336_residues
MKEAMFYKRESGNRAHCGLCRHRCMIADGSRGICAVRENRGGTLYSLVYGKLVAENVDPIEKKPLFHVLPGSKSFSIATM
GCNFRCHHCQNYSISQVAPKGPVAGIQQTPESVVEKALATGSRSIAYTYTEPTIFFEFAYDTARLARQAGLLNVFVTNGY
ITREALTAIAPYLDAANIDLKGFTEDFYRDYVHGRLSEVLDSIIEYRKQGIWIELTTLVIPGLNDSDGELKGIASFIVDN
LGADTPWHVTQFYPTYKLTDRPRTPVETLRRARDIGKAAGLNYVYEGNVPGEGGENTWCPSCSALLIERYGYLIENNQIR
DGRCPDCGTTIVGIGM

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37253; Mature: 37253

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAMFYKRESGNRAHCGLCRHRCMIADGSRGICAVRENRGGTLYSLVYGKLVAENVDPI
CCCCCEEECCCCCCCHHHHHHCEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCC
EKKPLFHVLPGSKSFSIATMGCNFRCHHCQNYSISQVAPKGPVAGIQQTPESVVEKALAT
CCCCEEEECCCCCCEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHC
GSRSIAYTYTEPTIFFEFAYDTARLARQAGLLNVFVTNGYITREALTAIAPYLDAANIDL
CCCEEEEEECCCEEEEEECHHHHHHHHHCCEEEEEEECCEEHHHHHHHHHHHHCCCCCCC
KGFTEDFYRDYVHGRLSEVLDSIIEYRKQGIWIELTTLVIPGLNDSDGELKGIASFIVDN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
LGADTPWHVTQFYPTYKLTDRPRTPVETLRRARDIGKAAGLNYVYEGNVPGEGGENTWCP
CCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
SCSALLIERYGYLIENNQIRDGRCPDCGTTIVGIGM
CHHHHHHHHCCCEEECCEECCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKEAMFYKRESGNRAHCGLCRHRCMIADGSRGICAVRENRGGTLYSLVYGKLVAENVDPI
CCCCCEEECCCCCCCHHHHHHCEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCC
EKKPLFHVLPGSKSFSIATMGCNFRCHHCQNYSISQVAPKGPVAGIQQTPESVVEKALAT
CCCCEEEECCCCCCEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHC
GSRSIAYTYTEPTIFFEFAYDTARLARQAGLLNVFVTNGYITREALTAIAPYLDAANIDL
CCCEEEEEECCCEEEEEECHHHHHHHHHCCEEEEEEECCEEHHHHHHHHHHHHCCCCCCC
KGFTEDFYRDYVHGRLSEVLDSIIEYRKQGIWIELTTLVIPGLNDSDGELKGIASFIVDN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
LGADTPWHVTQFYPTYKLTDRPRTPVETLRRARDIGKAAGLNYVYEGNVPGEGGENTWCP
CCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
SCSALLIERYGYLIENNQIRDGRCPDCGTTIVGIGM
CHHHHHHHHCCCEEECCEECCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]