Click here to switch to the map view.

The map label for this gene is 78222223

Identifier: 78222223

GI number: 78222223

Start: 1117026

End: 1118195

Strand: Reverse

Name: 78222223

Synonym: Gmet_1003

Alternate gene names: NA

Gene position: 1118195-1117026 (Counterclockwise)

Preceding gene: 78222226

Following gene: 78222221

Centisome position: 27.97

GC content: 42.39

Gene sequence:

>1170_bases
GTGAATAAGAAGTTGTCCAAATATTCAGAGCAAGGAATACTGATGGCATCTAAACATAAGACTCCCTCTCATCTCGCACA
TATCGTCAAAAACGAATTAAAGAAGCGTAAACTCCTTGCCCCACCTCTAGTTGTGCTTACAGAGTTATTTCAAACTCTGT
ATTTTGCCAGCCTGAAGACGGAAGAATCACAGCCTATTAATTGTTACATTGTTTACATCAATCCAGAAAATCCAGACCCG
AAACCACCGGAACGAATCGTTAAAGATAGGTGGAGTTTTATCCCCTTGGGGCAGAGGGTAGCGTTCTCTGTTTCTTCTCT
AGTCAAAATTGCCAAGGCGTCAGATCCTCGTACATCTTCATTTGCTGTTTATCACGATCATAACAACAAATTATTCATCT
GGGGGCTTTTAGACCAAGGTAACAGGTACTTTGATTATTTAAATTTTGATGCGGAGAGTGGTCCTGAACGACCAGGACTT
TTTCAGGCAAGCATATTAGGGATTGGGCATCTCGCTGCGTACAAGGGCTATGACAGAATAGCTGAGCTGAATGTGGAGTC
AATAATAACTGAGGCTCACGACGTGCTTCGTTATGGCCCGATTAGAAAACATTTTCAACCTGCGGTAACAAAATTCATGG
AAAAAGTCAGAGAAGAGTTAGGGCCTGAGTACTACGACGATATATCTGGCTGGCGTGCCTCTTTTGAATCAGATTGGGTA
GCTACACTATGCAGAATACTCCTGCGTATGCGTGGTTTTCACCATGGTGGTGCATTGTTAATGACGCCAGACACCATTTA
TGATGGACTGAACATAAAGTACAACTTACAGTACGATAGACTTAGAACTGCACTTGTCCACAGAGCAGTTCACCAGATAC
AAAAGGATGTAGCAGAATCTGAGATAATTGACATACTGGATGATCCTGAAGCCGAAACTATGCCGTTGGTTCTTCATCTA
GATGAAAGTATTTCAAGTGACGAGTTGAATGATAGTAACAGCGAAATAGATGGGGCAATCTGGTTTGTATCTTTGCTGTC
AAGGGTTGACGGGTTGGTGCTATTAAATTTTGATCTGGAAGTTAAAGCTTTTGGTGTCGAAATCCTTGGCTCTTTAGCAG
AATCTGTGGTGACACAGGGGTTCTGGCAAGTCGCCAAGTGTGTGATATAG

Upstream 100 bases:

>100_bases
GATCAGCCAGAATCGCCCGATGATATGGGAATCCCCCTGGGCTGGCAGGAATGTTCCATTTGGGTAGATCACCGGTTCAC
GCGCGCACGCGCGTGAACCG

Downstream 100 bases:

>100_bases
CGCCACTTGCAGGCACTTGATGGTTCGGAAACCGTACGCTTTTCTGATAGTCAGTTTTGCTTTGAGGTTCAGACCCTCTA
CCGCGCCGCTGGAAAGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNKKLSKYSEQGILMASKHKTPSHLAHIVKNELKKRKLLAPPLVVLTELFQTLYFASLKTEESQPINCYIVYINPENPDP
KPPERIVKDRWSFIPLGQRVAFSVSSLVKIAKASDPRTSSFAVYHDHNNKLFIWGLLDQGNRYFDYLNFDAESGPERPGL
FQASILGIGHLAAYKGYDRIAELNVESIITEAHDVLRYGPIRKHFQPAVTKFMEKVREELGPEYYDDISGWRASFESDWV
ATLCRILLRMRGFHHGGALLMTPDTIYDGLNIKYNLQYDRLRTALVHRAVHQIQKDVAESEIIDILDDPEAETMPLVLHL
DESISSDELNDSNSEIDGAIWFVSLLSRVDGLVLLNFDLEVKAFGVEILGSLAESVVTQGFWQVAKCVI

Sequences:

>Translated_389_residues
MNKKLSKYSEQGILMASKHKTPSHLAHIVKNELKKRKLLAPPLVVLTELFQTLYFASLKTEESQPINCYIVYINPENPDP
KPPERIVKDRWSFIPLGQRVAFSVSSLVKIAKASDPRTSSFAVYHDHNNKLFIWGLLDQGNRYFDYLNFDAESGPERPGL
FQASILGIGHLAAYKGYDRIAELNVESIITEAHDVLRYGPIRKHFQPAVTKFMEKVREELGPEYYDDISGWRASFESDWV
ATLCRILLRMRGFHHGGALLMTPDTIYDGLNIKYNLQYDRLRTALVHRAVHQIQKDVAESEIIDILDDPEAETMPLVLHL
DESISSDELNDSNSEIDGAIWFVSLLSRVDGLVLLNFDLEVKAFGVEILGSLAESVVTQGFWQVAKCVI
>Mature_389_residues
MNKKLSKYSEQGILMASKHKTPSHLAHIVKNELKKRKLLAPPLVVLTELFQTLYFASLKTEESQPINCYIVYINPENPDP
KPPERIVKDRWSFIPLGQRVAFSVSSLVKIAKASDPRTSSFAVYHDHNNKLFIWGLLDQGNRYFDYLNFDAESGPERPGL
FQASILGIGHLAAYKGYDRIAELNVESIITEAHDVLRYGPIRKHFQPAVTKFMEKVREELGPEYYDDISGWRASFESDWV
ATLCRILLRMRGFHHGGALLMTPDTIYDGLNIKYNLQYDRLRTALVHRAVHQIQKDVAESEIIDILDDPEAETMPLVLHL
DESISSDELNDSNSEIDGAIWFVSLLSRVDGLVLLNFDLEVKAFGVEILGSLAESVVTQGFWQVAKCVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44161; Mature: 44161

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLSKYSEQGILMASKHKTPSHLAHIVKNELKKRKLLAPPLVVLTELFQTLYFASLKT
CCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
EESQPINCYIVYINPENPDPKPPERIVKDRWSFIPLGQRVAFSVSSLVKIAKASDPRTSS
CCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE
FAVYHDHNNKLFIWGLLDQGNRYFDYLNFDAESGPERPGLFQASILGIGHLAAYKGYDRI
EEEEEECCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
AELNVESIITEAHDVLRYGPIRKHFQPAVTKFMEKVREELGPEYYDDISGWRASFESDWV
HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
ATLCRILLRMRGFHHGGALLMTPDTIYDGLNIKYNLQYDRLRTALVHRAVHQIQKDVAES
HHHHHHHHHHCCCCCCCEEEECCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
EIIDILDDPEAETMPLVLHLDESISSDELNDSNSEIDGAIWFVSLLSRVDGLVLLNFDLE
HHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCE
VKAFGVEILGSLAESVVTQGFWQVAKCVI
EHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKLSKYSEQGILMASKHKTPSHLAHIVKNELKKRKLLAPPLVVLTELFQTLYFASLKT
CCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
EESQPINCYIVYINPENPDPKPPERIVKDRWSFIPLGQRVAFSVSSLVKIAKASDPRTSS
CCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE
FAVYHDHNNKLFIWGLLDQGNRYFDYLNFDAESGPERPGLFQASILGIGHLAAYKGYDRI
EEEEEECCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
AELNVESIITEAHDVLRYGPIRKHFQPAVTKFMEKVREELGPEYYDDISGWRASFESDWV
HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
ATLCRILLRMRGFHHGGALLMTPDTIYDGLNIKYNLQYDRLRTALVHRAVHQIQKDVAES
HHHHHHHHHHCCCCCCCEEEECCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
EIIDILDDPEAETMPLVLHLDESISSDELNDSNSEIDGAIWFVSLLSRVDGLVLLNFDLE
HHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCE
VKAFGVEILGSLAESVVTQGFWQVAKCVI
EHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA